RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TMEM121BQ9BXQ6 578 aaPredicted RBP17.68■□□□□ 0.42
ATXN3-201ENST00000340660 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
ATXN3-201ENST00000340660 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
ATXN3-201ENST00000340660 CHRNA2Q15822 529 aa17.67■□□□□ 0.42
ATXN3-201ENST00000340660 DHX57Q6P158 1386 aaKnown RBP17.66■□□□□ 0.42
ATXN3-201ENST00000340660 G3V3G9 751 aa17.66■□□□□ 0.42
ATXN3-201ENST00000340660 STK24Q9Y6E0 443 aa17.66■□□□□ 0.42
ATXN3-201ENST00000340660 PARP4Q9UKK3 1724 aaKnown RBP17.66■□□□□ 0.42
ATXN3-201ENST00000340660 SSH2Q76I76 1423 aa17.65■□□□□ 0.42
ATXN3-201ENST00000340660 TRPM3Q9HCF6 1732 aaPredicted RBP17.65■□□□□ 0.42
ATXN3-201ENST00000340660 TCP11L2Q8N4U5 519 aa17.65■□□□□ 0.42
ATXN3-201ENST00000340660 RGPD8O14715 1765 aaPredicted RBP17.65■□□□□ 0.42
ATXN3-201ENST00000340660 KIAA0232Q92628 1395 aa17.65■□□□□ 0.42
ATXN3-201ENST00000340660 PLEKHH1Q9ULM0 1364 aa17.65■□□□□ 0.42
ATXN3-201ENST00000340660 ALS2Q96Q42 1657 aa17.64■□□□□ 0.42
ATXN3-201ENST00000340660 ATP7BP35670 1465 aa17.63■□□□□ 0.41
ATXN3-201ENST00000340660 STK25O00506 426 aa17.63■□□□□ 0.41
ATXN3-201ENST00000340660 COL24A1Q17RW2 1714 aa17.63■□□□□ 0.41
ATXN3-201ENST00000340660 PAPPAQ13219 1627 aa17.62■□□□□ 0.41
ATXN3-201ENST00000340660 SNPHO15079 494 aa17.62■□□□□ 0.41
ATXN3-201ENST00000340660 POLD1P28340 1107 aa17.62■□□□□ 0.41
ATXN3-201ENST00000340660 LARP1Q6PKG0 1096 aaKnown RBP17.62■□□□□ 0.41
ATXN3-201ENST00000340660 TOPAZ1Q8N9V7 1692 aa17.6■□□□□ 0.41
ATXN3-201ENST00000340660 ARHGEF28Q8N1W1 1705 aaKnown RBP17.59■□□□□ 0.41
ATXN3-201ENST00000340660 ZNF827Q17R98 1081 aa17.59■□□□□ 0.41
ATXN3-201ENST00000340660 MICALL2Q8IY33 904 aa17.58■□□□□ 0.4
ATXN3-201ENST00000340660 FBXO22Q8NEZ5 403 aa17.58■□□□□ 0.4
ATXN3-201ENST00000340660 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
ATXN3-201ENST00000340660 TULP4Q9NRJ4 1543 aa17.57■□□□□ 0.4
ATXN3-201ENST00000340660 EVA1CP58658 441 aa17.56■□□□□ 0.4
ATXN3-201ENST00000340660 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
ATXN3-201ENST00000340660 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
ATXN3-201ENST00000340660 LRRC37A3O60309 1634 aa17.55■□□□□ 0.4
ATXN3-201ENST00000340660 CLTCL1P53675 1640 aa17.55■□□□□ 0.4
ATXN3-201ENST00000340660 PHRF1Q9P1Y6 1649 aaKnown RBP17.55■□□□□ 0.4
ATXN3-201ENST00000340660 NLRP6P59044 892 aa17.55■□□□□ 0.4
ATXN3-201ENST00000340660 RBM46Q8TBY0 533 aaKnown RBP17.54■□□□□ 0.4
ATXN3-201ENST00000340660 SLC16A10Q8TF71 515 aa17.54■□□□□ 0.4
ATXN3-201ENST00000340660 MFRPQ9BY79 579 aa17.54■□□□□ 0.4
ATXN3-201ENST00000340660 STK26Q9P289 416 aa17.54■□□□□ 0.4
ATXN3-201ENST00000340660 IFT172Q9UG01 1749 aa17.54■□□□□ 0.4
ATXN3-201ENST00000340660 ZC3H6P61129 1189 aaKnown RBP17.52■□□□□ 0.4
ATXN3-201ENST00000340660 NMRK2Q9NPI5 230 aa17.52■□□□□ 0.4
ATXN3-201ENST00000340660 BCL9O00512 1426 aa17.52■□□□□ 0.4
ATXN3-201ENST00000340660 KIAA1210Q9ULL0 1709 aa17.52■□□□□ 0.39
ATXN3-201ENST00000340660 MLLT1Q03111 559 aaPredicted RBP17.51■□□□□ 0.39
ATXN3-201ENST00000340660 MARCH10Q8NA82 808 aaPredicted RBP17.5■□□□□ 0.39
ATXN3-201ENST00000340660 DDB1Q16531 1140 aa17.48■□□□□ 0.39
ATXN3-201ENST00000340660 TMEM92Q6UXU6 159 aa17.48■□□□□ 0.39
ATXN3-201ENST00000340660 FSTL1Q12841 308 aa17.47■□□□□ 0.39
ATXN3-201ENST00000340660 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
ATXN3-201ENST00000340660 LMO7Q8WWI1 1683 aa17.46■□□□□ 0.39
ATXN3-201ENST00000340660 ABCC11Q96J66 1382 aa17.46■□□□□ 0.39
ATXN3-201ENST00000340660 PLSCR2Q9NRY7 297 aa17.46■□□□□ 0.39
ATXN3-201ENST00000340660 ACIN1Q9UKV3 1341 aaKnown RBP17.46■□□□□ 0.38
ATXN3-201ENST00000340660 KNDC1Q76NI1 1749 aa17.45■□□□□ 0.38
ATXN3-201ENST00000340660 USP19O94966 1318 aa17.45■□□□□ 0.38
ATXN3-201ENST00000340660 GPRASP1Q5JY77 1395 aa17.44■□□□□ 0.38
ATXN3-201ENST00000340660 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
ATXN3-201ENST00000340660 NUP155O75694 1391 aa17.43■□□□□ 0.38
ATXN3-201ENST00000340660 HOXB3P14651 431 aaPredicted RBP17.43■□□□□ 0.38
ATXN3-201ENST00000340660 MARVELD3Q96A59 401 aa17.43■□□□□ 0.38
ATXN3-201ENST00000340660 LRRC4BQ9NT99 713 aa17.43■□□□□ 0.38
ATXN3-201ENST00000340660 RGS19P49795 217 aa17.42■□□□□ 0.38
ATXN3-201ENST00000340660 ABHD8Q96I13 439 aa17.42■□□□□ 0.38
ATXN3-201ENST00000340660 ANKARQ7Z5J8 1434 aa17.4■□□□□ 0.38
ATXN3-201ENST00000340660 COL5A2P05997 1499 aaPredicted RBP17.4■□□□□ 0.38
ATXN3-201ENST00000340660 CDAN1Q8IWY9 1227 aa17.4■□□□□ 0.38
ATXN3-201ENST00000340660 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
ATXN3-201ENST00000340660 CRB1P82279 1406 aa17.39■□□□□ 0.38
ATXN3-201ENST00000340660 TNRC18O15417 2968 aaPredicted RBP17.39■□□□□ 0.37
ATXN3-201ENST00000340660 FOXN1O15353 648 aa17.39■□□□□ 0.37
ATXN3-201ENST00000340660 KIF1BO60333 1816 aa17.39■□□□□ 0.37
ATXN3-201ENST00000340660 AKAP12Q02952 1782 aa17.38■□□□□ 0.37
ATXN3-201ENST00000340660 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
ATXN3-201ENST00000340660 C16orf71Q8IYS4 520 aaPredicted RBP17.38■□□□□ 0.37
ATXN3-201ENST00000340660 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
ATXN3-201ENST00000340660 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
ATXN3-201ENST00000340660 CICQ96RK0 1608 aaPredicted RBP17.37■□□□□ 0.37
ATXN3-201ENST00000340660 PPLO60437 1756 aa17.36■□□□□ 0.37
ATXN3-201ENST00000340660 HS6ST3Q8IZP7 471 aa17.36■□□□□ 0.37
ATXN3-201ENST00000340660 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
ATXN3-201ENST00000340660 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
ATXN3-201ENST00000340660 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
ATXN3-201ENST00000340660 CPDO75976 1380 aa17.34■□□□□ 0.37
ATXN3-201ENST00000340660 VPS8Q8N3P4 1428 aa17.34■□□□□ 0.37
ATXN3-201ENST00000340660 IGSF1Q8N6C5 1336 aa17.33■□□□□ 0.36
ATXN3-201ENST00000340660 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
ATXN3-201ENST00000340660 ADGRF5Q8IZF2 1346 aa17.32■□□□□ 0.36
ATXN3-201ENST00000340660 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
ATXN3-201ENST00000340660 WNK3Q9BYP7 1800 aa17.32■□□□□ 0.36
ATXN3-201ENST00000340660 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
ATXN3-201ENST00000340660 EMP3P54852 163 aa17.31■□□□□ 0.36
ATXN3-201ENST00000340660 MSL1Q68DK7 614 aa17.31■□□□□ 0.36
ATXN3-201ENST00000340660 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
ATXN3-201ENST00000340660 TFCP2L1Q9NZI6 479 aa17.31■□□□□ 0.36
ATXN3-201ENST00000340660 ANKRD30BQ9BXX2 1392 aa17.3■□□□□ 0.36
ATXN3-201ENST00000340660 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
ATXN3-201ENST00000340660 ACSBG1Q96GR2 724 aa17.3■□□□□ 0.36
ATXN3-201ENST00000340660 SAFB2Q14151 953 aaKnown RBP eCLIP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms