RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 COL25A1Q9BXS0 654 aaPredicted RBP3.62□□□□□ -1.83
CCDC30-201ENST00000340612 ZBBXA8MT70 800 aa3.62□□□□□ -1.83
CCDC30-201ENST00000340612 PBXIP1Q96AQ6 731 aa3.62□□□□□ -1.83
CCDC30-201ENST00000340612 OCSTAMPQ9BR26 566 aa3.62□□□□□ -1.83
CCDC30-201ENST00000340612 PROCP04070 461 aa3.61□□□□□ -1.83
CCDC30-201ENST00000340612 TIMP2P16035 220 aa3.61□□□□□ -1.83
CCDC30-201ENST00000340612 C6orf118Q5T5N4 469 aa3.61□□□□□ -1.83
CCDC30-201ENST00000340612 KANK3Q6NY19 840 aa3.61□□□□□ -1.83
CCDC30-201ENST00000340612 DEPDC4Q8N2C3 294 aa3.61□□□□□ -1.83
CCDC30-201ENST00000340612 EVA1BQ9NVM1 165 aa3.61□□□□□ -1.83
CCDC30-201ENST00000340612 MARSP56192 900 aaKnown RBP3.61□□□□□ -1.83
CCDC30-201ENST00000340612 EIF4G2P78344 907 aaKnown RBP eCLIP3.61□□□□□ -1.83
CCDC30-201ENST00000340612 SRPK2P78362 688 aaKnown RBP3.61□□□□□ -1.83
CCDC30-201ENST00000340612 KCNH2Q12809 1159 aa3.61□□□□□ -1.83
CCDC30-201ENST00000340612 MAFBQ9Y5Q3 323 aaPredicted RBP3.61□□□□□ -1.83
CCDC30-201ENST00000340612 NNTQ13423 1086 aa3.6□□□□□ -1.83
CCDC30-201ENST00000340612 LINC01559Q495D7 138 aa3.6□□□□□ -1.83
CCDC30-201ENST00000340612 PNMA1Q8ND90 353 aa3.6□□□□□ -1.83
CCDC30-201ENST00000340612 FAM174AQ8TBP5 190 aa3.6□□□□□ -1.83
CCDC30-201ENST00000340612 CARD14Q9BXL6 1004 aa3.6□□□□□ -1.83
CCDC30-201ENST00000340612 WDR4P57081 412 aaKnown RBP3.6□□□□□ -1.83
CCDC30-201ENST00000340612 TRAIPQ9BWF2 469 aa3.6□□□□□ -1.83
CCDC30-201ENST00000340612 UNC93B1Q9H1C4 597 aa3.6□□□□□ -1.83
CCDC30-201ENST00000340612 PCDHB9Q9Y5E1 797 aa3.6□□□□□ -1.83
CCDC30-201ENST00000340612 ACIN1Q9UKV3 1341 aaKnown RBP3.6□□□□□ -1.83
CCDC30-201ENST00000340612 MAGEB6P1A0A0J9YX57 407 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 PPP1R15AO75807 674 aaPredicted RBP3.59□□□□□ -1.83
CCDC30-201ENST00000340612 SKIP12755 728 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 SH3BP2P78314 561 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 ZBTB7CA1YPR0 619 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 ATP9BO43861 1147 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 SOX11P35716 441 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 TSGA10IPQ3SY00 556 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 ADAM32Q8TC27 787 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 KLF16Q9BXK1 252 aaPredicted RBP3.59□□□□□ -1.83
CCDC30-201ENST00000340612 DNMT3LQ9UJW3 386 aa3.59□□□□□ -1.83
CCDC30-201ENST00000340612 K7ELQ4 463 aaPredicted RBP3.58□□□□□ -1.84
CCDC30-201ENST00000340612 BAP1Q92560 729 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 DCAF5Q96JK2 942 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 ZFAND3Q9H8U3 227 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 USP17L3A6NCW0 530 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 USP17L4A6NCW7 530 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 USP17L2Q6R6M4 530 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 USP17L1Q7RTZ2 530 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 FOXJ1Q92949 421 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 ARHGAP9Q9BRR9 750 aa3.58□□□□□ -1.84
CCDC30-201ENST00000340612 USP17L5A8MUK1 530 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 SLURP2P0DP57 97 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 PTK2Q05397 1052 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 PDXDC2PQ6P474 469 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 STK32AQ8WU08 396 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 SCARF2Q96GP6 870 aaPredicted RBP3.57□□□□□ -1.84
CCDC30-201ENST00000340612 CEP126Q9P2H0 1117 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 CSB-PGBD3P0DP91 1061 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 NCOA4Q13772 614 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 AGERQ15109 404 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 C4orf48Q5BLP8 95 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 KANK4Q5T7N3 995 aaPredicted RBP3.57□□□□□ -1.84
CCDC30-201ENST00000340612 NBPF14Q5TI25 921 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 LYPD4Q6UWN0 246 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 SH3BP5LQ7L8J4 393 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 GALNT6Q8NCL4 622 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 ZC3H4Q9UPT8 1303 aaKnown RBP3.57□□□□□ -1.84
CCDC30-201ENST00000340612 ADH1CP00326 375 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 SLFNL1Q499Z3 407 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 ZBTB33Q86T24 672 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 RNF135Q8IUD6 432 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 ZMIZ1Q9ULJ6 1067 aa3.57□□□□□ -1.84
CCDC30-201ENST00000340612 CNTNAP5Q8WYK1 1306 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 CRTC2Q53ET0 693 aaPredicted RBP3.56□□□□□ -1.84
CCDC30-201ENST00000340612 ARMC2Q8NEN0 867 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 VRTNQ9H8Y1 702 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 TMEM88BA6NKF7 163 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 FURINP09958 794 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 RAB15P59190 212 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 TMEM164Q5U3C3 297 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 DZIP3Q86Y13 1208 aaKnown RBP3.56□□□□□ -1.84
CCDC30-201ENST00000340612 PLPP7Q8NBV4 271 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 ITPKCQ96DU7 683 aa3.56□□□□□ -1.84
CCDC30-201ENST00000340612 MKRN1Q9UHC7 482 aaKnown RBP3.56□□□□□ -1.84
CCDC30-201ENST00000340612 GIGYF1O75420 1035 aaPredicted RBP3.55□□□□□ -1.84
CCDC30-201ENST00000340612 ATG7O95352 703 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 BMP2P12643 396 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 ERFEQ4G0M1 354 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 OXLD1Q5BKU9 147 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 SH3RF1Q7Z6J0 888 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 PHTF2Q8N3S3 785 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 ZNF511Q8NB15 262 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 CCDC85AQ96PX6 553 aaPredicted RBP3.55□□□□□ -1.84
CCDC30-201ENST00000340612 GZF1Q9H116 711 aaPredicted RBP3.55□□□□□ -1.84
CCDC30-201ENST00000340612 SOS2Q07890 1332 aaPredicted RBP3.55□□□□□ -1.84
CCDC30-201ENST00000340612 CUX2O14529 1486 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 LGR5O75473 907 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 ZIC2O95409 532 aaPredicted RBP3.55□□□□□ -1.84
CCDC30-201ENST00000340612 PTSQ03393 145 aa3.55□□□□□ -1.84
CCDC30-201ENST00000340612 GPKOWQ92917 476 aaPredicted RBP eCLIP3.55□□□□□ -1.84
CCDC30-201ENST00000340612 ZNF594Q96JF6 807 aaPredicted RBP3.55□□□□□ -1.84
CCDC30-201ENST00000340612 CDCA7Q9BWT1 371 aaPredicted RBP3.55□□□□□ -1.84
CCDC30-201ENST00000340612 NOVA2Q9UNW9 492 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms