RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 KIF24Q5T7B8 1368 aa23.78■■□□□ 1.4
VSTM1-201ENST00000338372 DDX54Q8TDD1 881 aaKnown RBP23.78■■□□□ 1.4
VSTM1-201ENST00000338372 PTGER2P43116 358 aa23.77■■□□□ 1.4
VSTM1-201ENST00000338372 ZCRB1Q8TBF4 217 aaKnown RBP23.76■■□□□ 1.39
VSTM1-201ENST00000338372 NCAPD2Q15021 1401 aa23.76■■□□□ 1.39
VSTM1-201ENST00000338372 USHBP1Q8N6Y0 703 aa23.75■■□□□ 1.39
VSTM1-201ENST00000338372 SGIP1Q9BQI5 828 aa23.75■■□□□ 1.39
VSTM1-201ENST00000338372 QSER1Q2KHR3 1735 aa23.75■■□□□ 1.39
VSTM1-201ENST00000338372 FLT4P35916 1363 aa23.75■■□□□ 1.39
VSTM1-201ENST00000338372 STK32BQ9NY57 414 aa23.74■■□□□ 1.39
VSTM1-201ENST00000338372 EMILIN1Q9Y6C2 1016 aa23.74■■□□□ 1.39
VSTM1-201ENST00000338372 ZNF827Q17R98 1081 aa23.73■■□□□ 1.39
VSTM1-201ENST00000338372 TUBGCP6Q96RT7 1819 aa23.73■■□□□ 1.39
VSTM1-201ENST00000338372 ZBTB7AO95365 584 aa23.72■■□□□ 1.39
VSTM1-201ENST00000338372 PRIM1P49642 420 aaKnown RBP23.72■■□□□ 1.39
VSTM1-201ENST00000338372 COL24A1Q17RW2 1714 aa23.72■■□□□ 1.39
VSTM1-201ENST00000338372 CGNL1Q0VF96 1302 aa23.71■■□□□ 1.39
VSTM1-201ENST00000338372 AKT1S1Q96B36 256 aa23.71■■□□□ 1.39
VSTM1-201ENST00000338372 PKD1L3Q7Z443 1732 aa23.7■■□□□ 1.39
VSTM1-201ENST00000338372 HSPA5P11021 654 aaKnown RBP23.7■■□□□ 1.38
VSTM1-201ENST00000338372 TOGARAM1Q9Y4F4 1720 aa23.68■■□□□ 1.38
VSTM1-201ENST00000338372 ATF5Q9Y2D1 282 aaPredicted RBP23.68■■□□□ 1.38
VSTM1-201ENST00000338372 SMG6Q86US8 1419 aaKnown RBP23.67■■□□□ 1.38
VSTM1-201ENST00000338372 WASHC2AQ641Q2 1341 aa23.67■■□□□ 1.38
VSTM1-201ENST00000338372 SLC27A3Q5K4L6 730 aa23.67■■□□□ 1.38
VSTM1-201ENST00000338372 POLKQ9UBT6 870 aa23.67■■□□□ 1.38
VSTM1-201ENST00000338372 ITGB4P16144 1822 aa23.66■■□□□ 1.38
VSTM1-201ENST00000338372 CYP27B1O15528 508 aa23.65■■□□□ 1.38
VSTM1-201ENST00000338372 KCNQ4P56696 695 aa23.65■■□□□ 1.38
VSTM1-201ENST00000338372 EIF4G2P78344 907 aaKnown RBP eCLIP23.65■■□□□ 1.38
VSTM1-201ENST00000338372 MTFR1LQ9H019 292 aa23.65■■□□□ 1.38
VSTM1-201ENST00000338372 RAPGEF4Q8WZA2 1011 aa23.64■■□□□ 1.37
VSTM1-201ENST00000338372 PPP1R1BQ9UD71 204 aaPredicted RBP23.64■■□□□ 1.37
VSTM1-201ENST00000338372 TATP17735 454 aaPredicted RBP23.63■■□□□ 1.37
VSTM1-201ENST00000338372 TAF1LQ8IZX4 1826 aa23.62■■□□□ 1.37
VSTM1-201ENST00000338372 EYA1Q99502 592 aa23.62■■□□□ 1.37
VSTM1-201ENST00000338372 SYTL4Q96C24 671 aaPredicted RBP23.61■■□□□ 1.37
VSTM1-201ENST00000338372 PNPLA7Q6ZV29 1317 aa23.6■■□□□ 1.37
VSTM1-201ENST00000338372 CCER1Q8TC90 406 aaPredicted RBP23.6■■□□□ 1.37
VSTM1-201ENST00000338372 PANK3Q9H999 370 aa23.6■■□□□ 1.37
VSTM1-201ENST00000338372 PCDH11XQ9BZA7 1347 aa23.59■■□□□ 1.37
VSTM1-201ENST00000338372 PCDH11YQ9BZA8 1340 aa23.59■■□□□ 1.37
VSTM1-201ENST00000338372 NKX1-1Q15270 411 aaPredicted RBP23.59■■□□□ 1.37
VSTM1-201ENST00000338372 SYT17Q9BSW7 474 aa23.57■■□□□ 1.36
VSTM1-201ENST00000338372 FHDC1Q9C0D6 1143 aaPredicted RBP23.57■■□□□ 1.36
VSTM1-201ENST00000338372 C5P01031 1676 aa23.57■■□□□ 1.36
VSTM1-201ENST00000338372 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
VSTM1-201ENST00000338372 EIF4A2Q14240 407 aaKnown RBP23.55■■□□□ 1.36
VSTM1-201ENST00000338372 SLC16A10Q8TF71 515 aa23.55■■□□□ 1.36
VSTM1-201ENST00000338372 POLR3GLQ9BT43 218 aa23.55■■□□□ 1.36
VSTM1-201ENST00000338372 MAP3K5Q99683 1374 aa23.54■■□□□ 1.36
VSTM1-201ENST00000338372 CCNL1Q9UK58 526 aaPredicted RBP23.54■■□□□ 1.36
VSTM1-201ENST00000338372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.53■■□□□ 1.36
VSTM1-201ENST00000338372 ARXQ96QS3 562 aa23.52■■□□□ 1.36
VSTM1-201ENST00000338372 UTRNP46939 3433 aa23.52■■□□□ 1.36
VSTM1-201ENST00000338372 TNNT2P45379 298 aaPredicted RBP23.51■■□□□ 1.35
VSTM1-201ENST00000338372 PIGBQ92521 554 aa23.5■■□□□ 1.35
VSTM1-201ENST00000338372 TFCP2L1Q9NZI6 479 aa23.5■■□□□ 1.35
VSTM1-201ENST00000338372 IGSF1Q8N6C5 1336 aa23.5■■□□□ 1.35
VSTM1-201ENST00000338372 PALLDQ8WX93 1383 aa23.5■■□□□ 1.35
VSTM1-201ENST00000338372 MPRIPQ6WCQ1 1025 aa23.49■■□□□ 1.35
VSTM1-201ENST00000338372 COL23A1Q86Y22 540 aaPredicted RBP23.49■■□□□ 1.35
VSTM1-201ENST00000338372 PLEKHG2Q9H7P9 1386 aa23.49■■□□□ 1.35
VSTM1-201ENST00000338372 UBR3Q6ZT12 1888 aa23.48■■□□□ 1.35
VSTM1-201ENST00000338372 PHKG2P15735 406 aa23.47■■□□□ 1.35
VSTM1-201ENST00000338372 SPG7Q9UQ90 795 aa23.47■■□□□ 1.35
VSTM1-201ENST00000338372 C4BP0C0L5 1744 aa23.47■■□□□ 1.35
VSTM1-201ENST00000338372 AMIGO3Q86WK7 504 aa23.46■■□□□ 1.35
VSTM1-201ENST00000338372 YY1P25490 414 aa23.45■■□□□ 1.34
VSTM1-201ENST00000338372 AMER1Q5JTC6 1135 aaPredicted RBP23.45■■□□□ 1.34
VSTM1-201ENST00000338372 CHD4Q14839 1912 aa23.45■■□□□ 1.34
VSTM1-201ENST00000338372 KIF7Q2M1P5 1343 aa23.44■■□□□ 1.34
VSTM1-201ENST00000338372 PER1O15534 1290 aaPredicted RBP23.43■■□□□ 1.34
VSTM1-201ENST00000338372 IFNL2Q8IZJ0 200 aa23.43■■□□□ 1.34
VSTM1-201ENST00000338372 SMARCC1Q92922 1105 aaPredicted RBP23.42■■□□□ 1.34
VSTM1-201ENST00000338372 ASAP1Q9ULH1 1129 aa23.41■■□□□ 1.34
VSTM1-201ENST00000338372 MORC1Q86VD1 984 aa23.4■■□□□ 1.34
VSTM1-201ENST00000338372 ZNF831Q5JPB2 1677 aa23.39■■□□□ 1.34
VSTM1-201ENST00000338372 DCAF8L1A6NGE4 600 aa23.38■■□□□ 1.33
VSTM1-201ENST00000338372 AEBP1Q8IUX7 1158 aa23.38■■□□□ 1.33
VSTM1-201ENST00000338372 ATG3Q9NT62 314 aa23.38■■□□□ 1.33
VSTM1-201ENST00000338372 KDRP35968 1356 aa23.38■■□□□ 1.33
VSTM1-201ENST00000338372 KDM6AO15550 1401 aaPredicted RBP23.37■■□□□ 1.33
VSTM1-201ENST00000338372 GOLGB1Q14789 3259 aaKnown RBP23.37■■□□□ 1.33
VSTM1-201ENST00000338372 LOC102724428A0A0B4J2F2 783 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 POLD1P28340 1107 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 IL13P35225 146 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 SIK1P57059 783 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 ITPK1Q13572 414 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 SMIM5Q71RC9 77 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 LINC00116Q8NCU8 138 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 SLC4A9Q96Q91 983 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 KNSTRNQ9Y448 316 aa23.37■■□□□ 1.33
VSTM1-201ENST00000338372 NLGN2Q8NFZ4 835 aa23.36■■□□□ 1.33
VSTM1-201ENST00000338372 TMOD3Q9NYL9 352 aa23.36■■□□□ 1.33
VSTM1-201ENST00000338372 FLAD1Q8NFF5 587 aa23.34■■□□□ 1.33
VSTM1-201ENST00000338372 COL5A3P25940 1745 aaPredicted RBP23.33■■□□□ 1.33
VSTM1-201ENST00000338372 ERVV-2B6SEH9 535 aa23.33■■□□□ 1.33
VSTM1-201ENST00000338372 MSL1Q68DK7 614 aa23.33■■□□□ 1.33
VSTM1-201ENST00000338372 MYH14Q7Z406 1995 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms