RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 DOT1LQ8TEK3 1739 aa20.35■□□□□ 0.85
TSPO-201ENST00000329563 INSRP06213 1382 aa20.34■□□□□ 0.85
TSPO-201ENST00000329563 DDX54Q8TDD1 881 aaKnown RBP20.34■□□□□ 0.85
TSPO-201ENST00000329563 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
TSPO-201ENST00000329563 FLT4P35916 1363 aa20.34■□□□□ 0.85
TSPO-201ENST00000329563 PDGFDQ9GZP0 370 aaPredicted RBP20.33■□□□□ 0.85
TSPO-201ENST00000329563 PAPPAQ13219 1627 aa20.33■□□□□ 0.84
TSPO-201ENST00000329563 SLC15A2Q16348 729 aa20.32■□□□□ 0.84
TSPO-201ENST00000329563 KIF24Q5T7B8 1368 aa20.32■□□□□ 0.84
TSPO-201ENST00000329563 MAP2P11137 1827 aaKnown RBP20.31■□□□□ 0.84
TSPO-201ENST00000329563 SMG6Q86US8 1419 aaKnown RBP20.3■□□□□ 0.84
TSPO-201ENST00000329563 CGNL1Q0VF96 1302 aa20.29■□□□□ 0.84
TSPO-201ENST00000329563 ZCRB1Q8TBF4 217 aaKnown RBP20.29■□□□□ 0.84
TSPO-201ENST00000329563 NSD2O96028 1365 aa20.29■□□□□ 0.84
TSPO-201ENST00000329563 ZBTB7AO95365 584 aa20.28■□□□□ 0.84
TSPO-201ENST00000329563 NCAPD2Q15021 1401 aa20.27■□□□□ 0.84
TSPO-201ENST00000329563 MTFR1LQ9H019 292 aa20.27■□□□□ 0.84
TSPO-201ENST00000329563 PANK3Q9H999 370 aa20.27■□□□□ 0.84
TSPO-201ENST00000329563 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.84
TSPO-201ENST00000329563 YY1P25490 414 aa20.26■□□□□ 0.83
TSPO-201ENST00000329563 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
TSPO-201ENST00000329563 PKD1L3Q7Z443 1732 aa20.25■□□□□ 0.83
TSPO-201ENST00000329563 PPM1GO15355 546 aaPredicted RBP20.25■□□□□ 0.83
TSPO-201ENST00000329563 SLC27A3Q5K4L6 730 aa20.25■□□□□ 0.83
TSPO-201ENST00000329563 WASHC2AQ641Q2 1341 aa20.25■□□□□ 0.83
TSPO-201ENST00000329563 LY75O60449 1722 aa20.24■□□□□ 0.83
TSPO-201ENST00000329563 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
TSPO-201ENST00000329563 QSER1Q2KHR3 1735 aa20.24■□□□□ 0.83
TSPO-201ENST00000329563 TOGARAM1Q9Y4F4 1720 aa20.24■□□□□ 0.83
TSPO-201ENST00000329563 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
TSPO-201ENST00000329563 RAPGEF4Q8WZA2 1011 aa20.23■□□□□ 0.83
TSPO-201ENST00000329563 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
TSPO-201ENST00000329563 PTGER2P43116 358 aa20.22■□□□□ 0.83
TSPO-201ENST00000329563 ZNF827Q17R98 1081 aa20.22■□□□□ 0.83
TSPO-201ENST00000329563 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
TSPO-201ENST00000329563 KCNQ4P56696 695 aa20.21■□□□□ 0.83
TSPO-201ENST00000329563 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
TSPO-201ENST00000329563 CYP27B1O15528 508 aa20.2■□□□□ 0.82
TSPO-201ENST00000329563 HMGB2P26583 209 aaKnown RBP20.2■□□□□ 0.82
TSPO-201ENST00000329563 EYA1Q99502 592 aa20.2■□□□□ 0.82
TSPO-201ENST00000329563 TUBGCP6Q96RT7 1819 aa20.19■□□□□ 0.82
TSPO-201ENST00000329563 KIF7Q2M1P5 1343 aa20.19■□□□□ 0.82
TSPO-201ENST00000329563 PCDH11XQ9BZA7 1347 aa20.18■□□□□ 0.82
TSPO-201ENST00000329563 PCDH11YQ9BZA8 1340 aa20.18■□□□□ 0.82
TSPO-201ENST00000329563 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
TSPO-201ENST00000329563 SLC16A10Q8TF71 515 aa20.17■□□□□ 0.82
TSPO-201ENST00000329563 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
TSPO-201ENST00000329563 ITGB4P16144 1822 aa20.16■□□□□ 0.82
TSPO-201ENST00000329563 CHD4Q14839 1912 aa20.16■□□□□ 0.82
TSPO-201ENST00000329563 ARXQ96QS3 562 aa20.16■□□□□ 0.82
TSPO-201ENST00000329563 FHDC1Q9C0D6 1143 aaPredicted RBP20.16■□□□□ 0.82
TSPO-201ENST00000329563 SYT17Q9BSW7 474 aa20.15■□□□□ 0.82
TSPO-201ENST00000329563 MAP3K5Q99683 1374 aa20.14■□□□□ 0.81
TSPO-201ENST00000329563 POLD1P28340 1107 aa20.14■□□□□ 0.81
TSPO-201ENST00000329563 SGIP1Q9BQI5 828 aa20.14■□□□□ 0.81
TSPO-201ENST00000329563 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
TSPO-201ENST00000329563 ZNF316A6NFI3 1004 aaPredicted RBP20.13■□□□□ 0.81
TSPO-201ENST00000329563 UTRNP46939 3433 aa20.12■□□□□ 0.81
TSPO-201ENST00000329563 IGSF1Q8N6C5 1336 aa20.11■□□□□ 0.81
TSPO-201ENST00000329563 C5P01031 1676 aa20.11■□□□□ 0.81
TSPO-201ENST00000329563 NKX1-1Q15270 411 aaPredicted RBP20.11■□□□□ 0.81
TSPO-201ENST00000329563 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
TSPO-201ENST00000329563 CCNL1Q9UK58 526 aaPredicted RBP20.11■□□□□ 0.81
TSPO-201ENST00000329563 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
TSPO-201ENST00000329563 PNPLA7Q6ZV29 1317 aa20.1■□□□□ 0.81
TSPO-201ENST00000329563 MORC1Q86VD1 984 aa20.1■□□□□ 0.81
TSPO-201ENST00000329563 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
TSPO-201ENST00000329563 MPRIPQ6WCQ1 1025 aa20.09■□□□□ 0.81
TSPO-201ENST00000329563 KNSTRNQ9Y448 316 aa20.09■□□□□ 0.81
TSPO-201ENST00000329563 PER1O15534 1290 aaPredicted RBP20.08■□□□□ 0.81
TSPO-201ENST00000329563 SPG7Q9UQ90 795 aa20.08■□□□□ 0.81
TSPO-201ENST00000329563 PALLDQ8WX93 1383 aa20.08■□□□□ 0.8
TSPO-201ENST00000329563 PHKG2P15735 406 aa20.07■□□□□ 0.8
TSPO-201ENST00000329563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.07■□□□□ 0.8
TSPO-201ENST00000329563 PIGBQ92521 554 aa20.06■□□□□ 0.8
TSPO-201ENST00000329563 AEBP1Q8IUX7 1158 aa20.05■□□□□ 0.8
TSPO-201ENST00000329563 KLHL34Q8N239 644 aa20.04■□□□□ 0.8
TSPO-201ENST00000329563 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
TSPO-201ENST00000329563 MSH5O43196 834 aa20.03■□□□□ 0.8
TSPO-201ENST00000329563 IFNL2Q8IZJ0 200 aa20.03■□□□□ 0.8
TSPO-201ENST00000329563 FLAD1Q8NFF5 587 aa20.03■□□□□ 0.8
TSPO-201ENST00000329563 PLEKHG2Q9H7P9 1386 aa20.03■□□□□ 0.8
TSPO-201ENST00000329563 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
TSPO-201ENST00000329563 IL13P35225 146 aa20.02■□□□□ 0.8
TSPO-201ENST00000329563 GPR162Q16538 588 aa20.02■□□□□ 0.8
TSPO-201ENST00000329563 AMIGO3Q86WK7 504 aa20.01■□□□□ 0.79
TSPO-201ENST00000329563 COL23A1Q86Y22 540 aaPredicted RBP20.01■□□□□ 0.79
TSPO-201ENST00000329563 KDM6AO15550 1401 aaPredicted RBP20■□□□□ 0.79
TSPO-201ENST00000329563 KDRP35968 1356 aa19.99■□□□□ 0.79
TSPO-201ENST00000329563 CC2D1BQ5T0F9 858 aaKnown RBP19.99■□□□□ 0.79
TSPO-201ENST00000329563 ASAP1Q9ULH1 1129 aa19.99■□□□□ 0.79
TSPO-201ENST00000329563 MTHFSP49914 203 aa19.98■□□□□ 0.79
TSPO-201ENST00000329563 TMOD3Q9NYL9 352 aa19.98■□□□□ 0.79
TSPO-201ENST00000329563 UBR3Q6ZT12 1888 aa19.98■□□□□ 0.79
TSPO-201ENST00000329563 GOLGB1Q14789 3259 aaKnown RBP19.98■□□□□ 0.79
TSPO-201ENST00000329563 SULT6B1Q6IMI4 303 aa19.97■□□□□ 0.79
TSPO-201ENST00000329563 SMIM5Q71RC9 77 aa19.97■□□□□ 0.79
TSPO-201ENST00000329563 ZNF784Q8NCA9 323 aaPredicted RBP19.97■□□□□ 0.79
TSPO-201ENST00000329563 AK7Q96M32 723 aa19.96■□□□□ 0.79
TSPO-201ENST00000329563 ATG3Q9NT62 314 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms