RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 RBM27Q9P2N5 1060 aaKnown RBP19.72■□□□□ 0.75
SFXN1-201ENST00000321442 KDM2BQ8NHM5 1336 aa19.71■□□□□ 0.75
SFXN1-201ENST00000321442 LTKP29376 864 aa19.71■□□□□ 0.75
SFXN1-201ENST00000321442 RIC3Q7Z5B4 369 aa19.71■□□□□ 0.75
SFXN1-201ENST00000321442 HOMER1Q86YM7 354 aa19.71■□□□□ 0.75
SFXN1-201ENST00000321442 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.71■□□□□ 0.75
SFXN1-201ENST00000321442 NPATQ14207 1427 aa19.71■□□□□ 0.75
SFXN1-201ENST00000321442 GNAI2P04899 355 aa19.71■□□□□ 0.75
SFXN1-201ENST00000321442 GNAI3P08754 354 aa19.71■□□□□ 0.75
SFXN1-201ENST00000321442 F6X3S4 739 aa19.7■□□□□ 0.74
SFXN1-201ENST00000321442 UHRF1BP1Q6BDS2 1440 aa19.7■□□□□ 0.74
SFXN1-201ENST00000321442 PTCD1O75127 700 aaKnown RBP19.7■□□□□ 0.74
SFXN1-201ENST00000321442 ADAMTS2O95450 1211 aa19.69■□□□□ 0.74
SFXN1-201ENST00000321442 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
SFXN1-201ENST00000321442 ANXA1P04083 346 aa19.69■□□□□ 0.74
SFXN1-201ENST00000321442 CEBPZQ03701 1054 aaKnown RBP19.69■□□□□ 0.74
SFXN1-201ENST00000321442 NEXNQ0ZGT2 675 aa19.69■□□□□ 0.74
SFXN1-201ENST00000321442 TOMM22Q9NS69 142 aa19.69■□□□□ 0.74
SFXN1-201ENST00000321442 TSPOAP1O95153 1857 aa19.69■□□□□ 0.74
SFXN1-201ENST00000321442 PLEKHO1Q53GL0 409 aaPredicted RBP19.68■□□□□ 0.74
SFXN1-201ENST00000321442 G3BP1Q13283 466 aaKnown RBP eCLIP19.68■□□□□ 0.74
SFXN1-201ENST00000321442 POLKQ9UBT6 870 aa19.68■□□□□ 0.74
SFXN1-201ENST00000321442 BMP2KLQ5H9B9 411 aa19.68■□□□□ 0.74
SFXN1-201ENST00000321442 DDX17Q92841 729 aaKnown RBP19.68■□□□□ 0.74
SFXN1-201ENST00000321442 LARP6Q9BRS8 491 aaKnown RBP19.68■□□□□ 0.74
SFXN1-201ENST00000321442 LRRCC1Q9C099 1032 aa19.68■□□□□ 0.74
SFXN1-201ENST00000321442 KRT24Q2M2I5 525 aa19.68■□□□□ 0.74
SFXN1-201ENST00000321442 CLASRPQ8N2M8 674 aaKnown RBP19.68■□□□□ 0.74
SFXN1-201ENST00000321442 RNF20Q5VTR2 975 aa19.67■□□□□ 0.74
SFXN1-201ENST00000321442 PHACTR3Q96KR7 559 aa19.67■□□□□ 0.74
SFXN1-201ENST00000321442 WDR33Q9C0J8 1336 aaKnown RBP19.67■□□□□ 0.74
SFXN1-201ENST00000321442 FMNL2Q96PY5 1086 aa19.67■□□□□ 0.74
SFXN1-201ENST00000321442 PPP6R1Q9UPN7 881 aa19.66■□□□□ 0.74
SFXN1-201ENST00000321442 TPD52L1Q16890 204 aaPredicted RBP19.66■□□□□ 0.74
SFXN1-201ENST00000321442 CNTROBQ8N137 903 aa19.65■□□□□ 0.74
SFXN1-201ENST00000321442 A0A1W2PP64 1363 aa19.65■□□□□ 0.74
SFXN1-201ENST00000321442 KRT28Q7Z3Y7 464 aa19.65■□□□□ 0.74
SFXN1-201ENST00000321442 RPAP2Q8IXW5 612 aaPredicted RBP19.65■□□□□ 0.74
SFXN1-201ENST00000321442 TATP17735 454 aaPredicted RBP19.65■□□□□ 0.74
SFXN1-201ENST00000321442 TSHZ3Q63HK5 1081 aa19.65■□□□□ 0.74
SFXN1-201ENST00000321442 FERMT3Q86UX7 667 aa19.65■□□□□ 0.74
SFXN1-201ENST00000321442 TTC21BQ7Z4L5 1316 aa19.65■□□□□ 0.74
SFXN1-201ENST00000321442 STK3Q13188 491 aa19.64■□□□□ 0.73
SFXN1-201ENST00000321442 LRRC59Q96AG4 307 aaKnown RBP19.64■□□□□ 0.73
SFXN1-201ENST00000321442 SDF4Q9BRK5 362 aa19.64■□□□□ 0.73
SFXN1-201ENST00000321442 CCDC85AQ96PX6 553 aaPredicted RBP19.64■□□□□ 0.73
SFXN1-201ENST00000321442 CCDC73Q6ZRK6 1079 aa19.64■□□□□ 0.73
SFXN1-201ENST00000321442 USP25Q9UHP3 1055 aa19.64■□□□□ 0.73
SFXN1-201ENST00000321442 KLHL40Q2TBA0 621 aa19.63■□□□□ 0.73
SFXN1-201ENST00000321442 ORAI2Q96SN7 254 aa19.63■□□□□ 0.73
SFXN1-201ENST00000321442 PDCL3Q9H2J4 239 aa19.63■□□□□ 0.73
SFXN1-201ENST00000321442 PPIP5K1Q6PFW1 1433 aa19.63■□□□□ 0.73
SFXN1-201ENST00000321442 MEX3CQ5U5Q3 659 aaKnown RBP19.63■□□□□ 0.73
SFXN1-201ENST00000321442 CWC27Q6UX04 472 aaKnown RBP19.62■□□□□ 0.73
SFXN1-201ENST00000321442 CCDC30Q5VVM6 783 aa19.62■□□□□ 0.73
SFXN1-201ENST00000321442 SIL1Q9H173 461 aa19.62■□□□□ 0.73
SFXN1-201ENST00000321442 HDAC1Q13547 482 aaPredicted RBP19.62■□□□□ 0.73
SFXN1-201ENST00000321442 FSD1Q9BTV5 496 aa19.62■□□□□ 0.73
SFXN1-201ENST00000321442 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
SFXN1-201ENST00000321442 HSP90AB4PQ58FF6 505 aa19.62■□□□□ 0.73
SFXN1-201ENST00000321442 NUTM1Q86Y26 1132 aa19.62■□□□□ 0.73
SFXN1-201ENST00000321442 BTBD11A6QL63 1104 aa19.61■□□□□ 0.73
SFXN1-201ENST00000321442 NUCB1Q02818 461 aa19.61■□□□□ 0.73
SFXN1-201ENST00000321442 SPATA31E1Q6ZUB1 1445 aa19.61■□□□□ 0.73
SFXN1-201ENST00000321442 CPLX1O14810 134 aa19.6■□□□□ 0.73
SFXN1-201ENST00000321442 CCDC192P0DO97 292 aa19.6■□□□□ 0.73
SFXN1-201ENST00000321442 CBX1P83916 185 aa19.6■□□□□ 0.73
SFXN1-201ENST00000321442 LARP1BQ659C4 914 aaKnown RBP19.6■□□□□ 0.73
SFXN1-201ENST00000321442 YTHDC2Q9H6S0 1430 aaKnown RBP19.6■□□□□ 0.73
SFXN1-201ENST00000321442 ANKRD36BQ8N2N9 1353 aa19.6■□□□□ 0.73
SFXN1-201ENST00000321442 ZCCHC11Q5TAX3 1644 aaKnown RBP19.6■□□□□ 0.73
SFXN1-201ENST00000321442 GNAT3A8MTJ3 354 aa19.59■□□□□ 0.73
SFXN1-201ENST00000321442 CABP4P57796 275 aa19.59■□□□□ 0.73
SFXN1-201ENST00000321442 C16orf71Q8IYS4 520 aaPredicted RBP19.59■□□□□ 0.73
SFXN1-201ENST00000321442 NEUROD6Q96NK8 337 aa19.59■□□□□ 0.73
SFXN1-201ENST00000321442 PES1O00541 588 aaKnown RBP19.59■□□□□ 0.73
SFXN1-201ENST00000321442 ZSCAN23Q3MJ62 389 aa19.59■□□□□ 0.73
SFXN1-201ENST00000321442 PLA2R1Q13018 1463 aa19.59■□□□□ 0.73
SFXN1-201ENST00000321442 MYO5CQ9NQX4 1742 aa19.59■□□□□ 0.73
SFXN1-201ENST00000321442 LETM1O95202 739 aaPredicted RBP19.59■□□□□ 0.73
SFXN1-201ENST00000321442 CCT4P50991 539 aaKnown RBP19.59■□□□□ 0.73
SFXN1-201ENST00000321442 ATP10AO60312 1499 aa19.59■□□□□ 0.73
SFXN1-201ENST00000321442 MAST1Q9Y2H9 1570 aa19.58■□□□□ 0.73
SFXN1-201ENST00000321442 SRGAP3O43295 1099 aa19.58■□□□□ 0.73
SFXN1-201ENST00000321442 KDM4AO75164 1064 aa19.58■□□□□ 0.73
SFXN1-201ENST00000321442 DDX58O95786 925 aaKnown RBP19.58■□□□□ 0.73
SFXN1-201ENST00000321442 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.73
SFXN1-201ENST00000321442 CAMK4Q16566 473 aa19.58■□□□□ 0.72
SFXN1-201ENST00000321442 EIF4A2Q14240 407 aaKnown RBP19.58■□□□□ 0.72
SFXN1-201ENST00000321442 ZNF830Q96NB3 372 aaPredicted RBP19.58■□□□□ 0.72
SFXN1-201ENST00000321442 MBIPQ9NS73 344 aa19.57■□□□□ 0.72
SFXN1-201ENST00000321442 CYP46A1Q9Y6A2 500 aa19.57■□□□□ 0.72
SFXN1-201ENST00000321442 JAKMIP1Q96N16 626 aaKnown RBP19.57■□□□□ 0.72
SFXN1-201ENST00000321442 TNMDQ9H2S6 317 aa19.57■□□□□ 0.72
SFXN1-201ENST00000321442 FILIP1Q7Z7B0 1213 aa19.56■□□□□ 0.72
SFXN1-201ENST00000321442 TSPYL6Q8N831 410 aa19.56■□□□□ 0.72
SFXN1-201ENST00000321442 PDCP20941 246 aa19.56■□□□□ 0.72
SFXN1-201ENST00000321442 PRIM1P49642 420 aaKnown RBP19.56■□□□□ 0.72
SFXN1-201ENST00000321442 JARID2Q92833 1246 aaPredicted RBP19.56■□□□□ 0.72
SFXN1-201ENST00000321442 KRT85P78386 507 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms