RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 BABAM1Q9NWV8 329 aa22.92■■□□□ 1.26
RAB39A-201ENST00000320578 IPO8O15397 1037 aaKnown RBP22.91■■□□□ 1.26
RAB39A-201ENST00000320578 MCM10Q7L590 875 aa22.91■■□□□ 1.26
RAB39A-201ENST00000320578 PLEKHG2Q9H7P9 1386 aa22.91■■□□□ 1.26
RAB39A-201ENST00000320578 MAP3K5Q99683 1374 aa22.9■■□□□ 1.26
RAB39A-201ENST00000320578 CRYBG1Q9Y4K1 1723 aa22.9■■□□□ 1.26
RAB39A-201ENST00000320578 AMOTQ4VCS5 1084 aa22.89■■□□□ 1.25
RAB39A-201ENST00000320578 BCL2L13Q9BXK5 485 aa22.89■■□□□ 1.25
RAB39A-201ENST00000320578 AXIN2Q9Y2T1 843 aa22.89■■□□□ 1.25
RAB39A-201ENST00000320578 ERBB3P21860 1342 aa22.88■■□□□ 1.25
RAB39A-201ENST00000320578 ZBTB7CA1YPR0 619 aa22.88■■□□□ 1.25
RAB39A-201ENST00000320578 TWISTNBQ3B726 338 aaPredicted RBP22.88■■□□□ 1.25
RAB39A-201ENST00000320578 ARHGAP45Q92619 1136 aa22.88■■□□□ 1.25
RAB39A-201ENST00000320578 LRRC37A3O60309 1634 aa22.87■■□□□ 1.25
RAB39A-201ENST00000320578 LMO7Q8WWI1 1683 aa22.87■■□□□ 1.25
RAB39A-201ENST00000320578 ZC3H6P61129 1189 aaKnown RBP22.87■■□□□ 1.25
RAB39A-201ENST00000320578 ATF7IPQ6VMQ6 1270 aa22.87■■□□□ 1.25
RAB39A-201ENST00000320578 DZIP1LQ8IYY4 767 aaKnown RBP22.87■■□□□ 1.25
RAB39A-201ENST00000320578 PANK1Q8TE04 598 aa22.87■■□□□ 1.25
RAB39A-201ENST00000320578 COL18A1P39060 1754 aa22.86■■□□□ 1.25
RAB39A-201ENST00000320578 PLEKHO1Q53GL0 409 aaPredicted RBP22.86■■□□□ 1.25
RAB39A-201ENST00000320578 USHBP1Q8N6Y0 703 aa22.86■■□□□ 1.25
RAB39A-201ENST00000320578 TSPYL6Q8N831 410 aa22.85■■□□□ 1.25
RAB39A-201ENST00000320578 C8orf58Q8NAV2 365 aa22.85■■□□□ 1.25
RAB39A-201ENST00000320578 MRPL50Q8N5N7 158 aaKnown RBP22.85■■□□□ 1.25
RAB39A-201ENST00000320578 LRRC59Q96AG4 307 aaKnown RBP22.85■■□□□ 1.25
RAB39A-201ENST00000320578 TSHZ2Q9NRE2 1034 aa22.85■■□□□ 1.25
RAB39A-201ENST00000320578 NHSL1Q5SYE7 1610 aa22.84■■□□□ 1.25
RAB39A-201ENST00000320578 NOB1Q9ULX3 412 aaKnown RBP22.84■■□□□ 1.25
RAB39A-201ENST00000320578 COG6Q9Y2V7 657 aa22.84■■□□□ 1.25
RAB39A-201ENST00000320578 SOS1Q07889 1333 aaPredicted RBP22.84■■□□□ 1.25
RAB39A-201ENST00000320578 KDM2BQ8NHM5 1336 aa22.84■■□□□ 1.25
RAB39A-201ENST00000320578 RLBP1P12271 317 aa22.83■■□□□ 1.25
RAB39A-201ENST00000320578 TRIM27P14373 513 aa22.83■■□□□ 1.25
RAB39A-201ENST00000320578 MVPQ14764 893 aaKnown RBP22.83■■□□□ 1.25
RAB39A-201ENST00000320578 CENPQQ7L2Z9 268 aaPredicted RBP22.83■■□□□ 1.25
RAB39A-201ENST00000320578 CLUAP1Q96AJ1 413 aa22.83■■□□□ 1.25
RAB39A-201ENST00000320578 CEMIPQ8WUJ3 1361 aa22.83■■□□□ 1.25
RAB39A-201ENST00000320578 AKAP4Q5JQC9 854 aa22.82■■□□□ 1.24
RAB39A-201ENST00000320578 FTSJ3Q8IY81 847 aaKnown RBP22.82■■□□□ 1.24
RAB39A-201ENST00000320578 IL17REQ8NFR9 667 aa22.82■■□□□ 1.24
RAB39A-201ENST00000320578 OVOS2A0A0G2JMS6 1433 aa22.81■■□□□ 1.24
RAB39A-201ENST00000320578 FAM208AQ9UK61 1670 aaKnown RBP22.81■■□□□ 1.24
RAB39A-201ENST00000320578 RGPD2P0DJD1 1756 aa22.8■■□□□ 1.24
RAB39A-201ENST00000320578 LTBP4Q8N2S1 1624 aa22.8■■□□□ 1.24
RAB39A-201ENST00000320578 TAF7Q15545 349 aaPredicted RBP22.8■■□□□ 1.24
RAB39A-201ENST00000320578 CABLES1Q8TDN4 633 aa22.8■■□□□ 1.24
RAB39A-201ENST00000320578 TSPYL4Q9UJ04 414 aa22.8■■□□□ 1.24
RAB39A-201ENST00000320578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.78■■□□□ 1.24
RAB39A-201ENST00000320578 DDX19BQ9UMR2 479 aa22.78■■□□□ 1.24
RAB39A-201ENST00000320578 TNNQ9UQP3 1299 aa22.78■■□□□ 1.24
RAB39A-201ENST00000320578 PLEKHG5O94827 1062 aa22.78■■□□□ 1.24
RAB39A-201ENST00000320578 RGPD5Q99666 1765 aa22.76■■□□□ 1.23
RAB39A-201ENST00000320578 ZNF530Q6P9A1 599 aaPredicted RBP22.76■■□□□ 1.23
RAB39A-201ENST00000320578 ELL2O00472 640 aaPredicted RBP22.75■■□□□ 1.23
RAB39A-201ENST00000320578 API5Q9BZZ5 524 aaKnown RBP22.75■■□□□ 1.23
RAB39A-201ENST00000320578 CHMP4BQ9H444 224 aaKnown RBP22.75■■□□□ 1.23
RAB39A-201ENST00000320578 C1orf141Q5JVX7 400 aa22.74■■□□□ 1.23
RAB39A-201ENST00000320578 RAPGEF4Q8WZA2 1011 aa22.73■■□□□ 1.23
RAB39A-201ENST00000320578 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
RAB39A-201ENST00000320578 TCERG1O14776 1098 aaKnown RBP22.73■■□□□ 1.23
RAB39A-201ENST00000320578 AHDC1Q5TGY3 1603 aaPredicted RBP22.72■■□□□ 1.23
RAB39A-201ENST00000320578 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
RAB39A-201ENST00000320578 ABCC4O15439 1325 aa22.72■■□□□ 1.23
RAB39A-201ENST00000320578 CHRNA2Q15822 529 aa22.71■■□□□ 1.23
RAB39A-201ENST00000320578 CHMP4AQ9BY43 222 aa22.71■■□□□ 1.23
RAB39A-201ENST00000320578 PRDM11Q9NQV5 511 aa22.71■■□□□ 1.23
RAB39A-201ENST00000320578 MIS18AQ9NYP9 233 aa22.71■■□□□ 1.23
RAB39A-201ENST00000320578 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
RAB39A-201ENST00000320578 CSB-PGBD3P0DP91 1061 aa22.71■■□□□ 1.23
RAB39A-201ENST00000320578 TMEM57Q8N5G2 664 aa22.71■■□□□ 1.23
RAB39A-201ENST00000320578 ABCA3Q99758 1704 aa22.71■■□□□ 1.23
RAB39A-201ENST00000320578 PTPRCP08575 1304 aa22.7■■□□□ 1.22
RAB39A-201ENST00000320578 SPG7Q9UQ90 795 aa22.7■■□□□ 1.22
RAB39A-201ENST00000320578 ADAMTS7Q9UKP4 1686 aa22.7■■□□□ 1.22
RAB39A-201ENST00000320578 KRT24Q2M2I5 525 aa22.69■■□□□ 1.22
RAB39A-201ENST00000320578 WDR17Q8IZU2 1322 aa22.69■■□□□ 1.22
RAB39A-201ENST00000320578 HOXB7P09629 217 aa22.68■■□□□ 1.22
RAB39A-201ENST00000320578 ITPRIPQ8IWB1 547 aa22.68■■□□□ 1.22
RAB39A-201ENST00000320578 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
RAB39A-201ENST00000320578 TEFQ10587 303 aa22.67■■□□□ 1.22
RAB39A-201ENST00000320578 ZBTB40Q9NUA8 1239 aa22.67■■□□□ 1.22
RAB39A-201ENST00000320578 PCDHB15Q9Y5E8 787 aa22.67■■□□□ 1.22
RAB39A-201ENST00000320578 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
RAB39A-201ENST00000320578 COL5A2P05997 1499 aaPredicted RBP22.66■■□□□ 1.22
RAB39A-201ENST00000320578 IGHDP01880 384 aa22.66■■□□□ 1.22
RAB39A-201ENST00000320578 CCDC30Q5VVM6 783 aa22.66■■□□□ 1.22
RAB39A-201ENST00000320578 ROBO1Q9Y6N7 1651 aa22.65■■□□□ 1.22
RAB39A-201ENST00000320578 MEGF6O75095 1541 aa22.65■■□□□ 1.22
RAB39A-201ENST00000320578 MPRIPQ6WCQ1 1025 aa22.64■■□□□ 1.22
RAB39A-201ENST00000320578 HDAC1Q13547 482 aaPredicted RBP22.64■■□□□ 1.21
RAB39A-201ENST00000320578 KDM3BQ7LBC6 1761 aa22.63■■□□□ 1.21
RAB39A-201ENST00000320578 ZBTB7BO15156 539 aaPredicted RBP22.63■■□□□ 1.21
RAB39A-201ENST00000320578 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
RAB39A-201ENST00000320578 INTS3Q68E01 1043 aaKnown RBP22.63■■□□□ 1.21
RAB39A-201ENST00000320578 IFNL2Q8IZJ0 200 aa22.63■■□□□ 1.21
RAB39A-201ENST00000320578 CARD10Q9BWT7 1032 aa22.63■■□□□ 1.21
RAB39A-201ENST00000320578 PKD1L3Q7Z443 1732 aa22.62■■□□□ 1.21
RAB39A-201ENST00000320578 COL22A1Q8NFW1 1626 aaPredicted RBP22.62■■□□□ 1.21
RAB39A-201ENST00000320578 SLC4A2P04920 1241 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms