RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 CSB-PGBD3P0DP91 1061 aa10.73□□□□□ -0.69
CDC42-201ENST00000315554 RXRBP28702 533 aa10.73□□□□□ -0.69
CDC42-201ENST00000315554 VPS72Q15906 364 aa10.73□□□□□ -0.69
CDC42-201ENST00000315554 NWD2Q9ULI1 1742 aa10.73□□□□□ -0.69
CDC42-201ENST00000315554 COL5A2P05997 1499 aaPredicted RBP10.72□□□□□ -0.69
CDC42-201ENST00000315554 HOXC9P31274 260 aa10.72□□□□□ -0.69
CDC42-201ENST00000315554 RBM6P78332 1123 aaKnown RBP10.72□□□□□ -0.69
CDC42-201ENST00000315554 GJD4Q96KN9 370 aaPredicted RBP10.72□□□□□ -0.69
CDC42-201ENST00000315554 NSD2O96028 1365 aa10.72□□□□□ -0.69
CDC42-201ENST00000315554 ANKRD26Q9UPS8 1709 aa10.71□□□□□ -0.69
CDC42-201ENST00000315554 RGPD5Q99666 1765 aa10.71□□□□□ -0.69
CDC42-201ENST00000315554 ANKRD24Q8TF21 1146 aa10.71□□□□□ -0.69
CDC42-201ENST00000315554 IP6K1Q92551 441 aa10.71□□□□□ -0.69
CDC42-201ENST00000315554 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.71□□□□□ -0.7
CDC42-201ENST00000315554 PEAK1Q9H792 1746 aa10.71□□□□□ -0.7
CDC42-201ENST00000315554 GLI3P10071 1580 aa10.71□□□□□ -0.7
CDC42-201ENST00000315554 A0A0G2JS52 829 aa10.7□□□□□ -0.7
CDC42-201ENST00000315554 FAM98CQ17RN3 349 aaKnown RBP10.7□□□□□ -0.7
CDC42-201ENST00000315554 HSP90AB2PQ58FF8 381 aa10.7□□□□□ -0.7
CDC42-201ENST00000315554 TOM1L2Q6ZVM7 507 aa10.7□□□□□ -0.7
CDC42-201ENST00000315554 POLKQ9UBT6 870 aa10.7□□□□□ -0.7
CDC42-201ENST00000315554 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
CDC42-201ENST00000315554 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
CDC42-201ENST00000315554 RGS12O14924 1447 aa10.7□□□□□ -0.7
CDC42-201ENST00000315554 ATN1P54259 1190 aaPredicted RBP10.69□□□□□ -0.7
CDC42-201ENST00000315554 NLRP2Q9NX02 1062 aa10.69□□□□□ -0.7
CDC42-201ENST00000315554 ERBB3P21860 1342 aa10.69□□□□□ -0.7
CDC42-201ENST00000315554 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
CDC42-201ENST00000315554 WDR17Q8IZU2 1322 aa10.69□□□□□ -0.7
CDC42-201ENST00000315554 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
CDC42-201ENST00000315554 RTL1A6NKG5 1358 aa10.68□□□□□ -0.7
CDC42-201ENST00000315554 FLT4P35916 1363 aa10.68□□□□□ -0.7
CDC42-201ENST00000315554 USHBP1Q8N6Y0 703 aa10.68□□□□□ -0.7
CDC42-201ENST00000315554 BLMP54132 1417 aaPredicted RBP10.67□□□□□ -0.7
CDC42-201ENST00000315554 CRB1P82279 1406 aa10.67□□□□□ -0.7
CDC42-201ENST00000315554 NPC1L1Q9UHC9 1359 aa10.67□□□□□ -0.7
CDC42-201ENST00000315554 ABCC6O95255 1503 aa10.67□□□□□ -0.7
CDC42-201ENST00000315554 POTEFA5A3E0 1075 aa10.67□□□□□ -0.7
CDC42-201ENST00000315554 SEPT12Q8IYM1 358 aa10.67□□□□□ -0.7
CDC42-201ENST00000315554 TCP11L2Q8N4U5 519 aa10.67□□□□□ -0.7
CDC42-201ENST00000315554 MAP2P11137 1827 aaKnown RBP10.66□□□□□ -0.7
CDC42-201ENST00000315554 MTHFSP49914 203 aa10.66□□□□□ -0.7
CDC42-201ENST00000315554 INSRP06213 1382 aa10.65□□□□□ -0.7
CDC42-201ENST00000315554 NBPF6Q5VWK0 638 aa10.65□□□□□ -0.7
CDC42-201ENST00000315554 NBPF4Q96M43 638 aa10.65□□□□□ -0.7
CDC42-201ENST00000315554 CARD10Q9BWT7 1032 aa10.65□□□□□ -0.7
CDC42-201ENST00000315554 SMG6Q86US8 1419 aaKnown RBP10.64□□□□□ -0.71
CDC42-201ENST00000315554 EIF4A2Q14240 407 aaKnown RBP10.64□□□□□ -0.71
CDC42-201ENST00000315554 FAM182BQ5T319 152 aa10.64□□□□□ -0.71
CDC42-201ENST00000315554 RGPD2P0DJD1 1756 aa10.64□□□□□ -0.71
CDC42-201ENST00000315554 CDK12Q9NYV4 1490 aaPredicted RBP10.63□□□□□ -0.71
CDC42-201ENST00000315554 PPP2R1AP30153 589 aa10.63□□□□□ -0.71
CDC42-201ENST00000315554 KIF24Q5T7B8 1368 aa10.63□□□□□ -0.71
CDC42-201ENST00000315554 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
CDC42-201ENST00000315554 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
CDC42-201ENST00000315554 EYA1Q99502 592 aa10.62□□□□□ -0.71
CDC42-201ENST00000315554 PARD3Q8TEW0 1356 aa10.62□□□□□ -0.71
CDC42-201ENST00000315554 THSD7AQ9UPZ6 1657 aa10.62□□□□□ -0.71
CDC42-201ENST00000315554 THRAP3Q9Y2W1 955 aaKnown RBP10.61□□□□□ -0.71
CDC42-201ENST00000315554 KRT27Q7Z3Y8 459 aa10.61□□□□□ -0.71
CDC42-201ENST00000315554 BRWD3Q6RI45 1802 aa10.6□□□□□ -0.71
CDC42-201ENST00000315554 DISP2A7MBM2 1401 aa10.6□□□□□ -0.71
CDC42-201ENST00000315554 FAM208AQ9UK61 1670 aaKnown RBP10.6□□□□□ -0.71
CDC42-201ENST00000315554 IL2RBP14784 551 aa10.6□□□□□ -0.71
CDC42-201ENST00000315554 IL13P35225 146 aa10.6□□□□□ -0.71
CDC42-201ENST00000315554 DDB1Q16531 1140 aa10.6□□□□□ -0.71
CDC42-201ENST00000315554 BMP2KQ9NSY1 1161 aaPredicted RBP10.6□□□□□ -0.71
CDC42-201ENST00000315554 MEGF6O75095 1541 aa10.59□□□□□ -0.71
CDC42-201ENST00000315554 WNK3Q9BYP7 1800 aa10.59□□□□□ -0.71
CDC42-201ENST00000315554 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
CDC42-201ENST00000315554 DIAPH1O60610 1272 aaKnown RBP10.59□□□□□ -0.71
CDC42-201ENST00000315554 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
CDC42-201ENST00000315554 AEBP1Q8IUX7 1158 aa10.59□□□□□ -0.71
CDC42-201ENST00000315554 LRRC37A3O60309 1634 aa10.59□□□□□ -0.71
CDC42-201ENST00000315554 U2SURPO15042 1029 aaKnown RBP10.58□□□□□ -0.72
CDC42-201ENST00000315554 COL3A1P02461 1466 aaPredicted RBP10.58□□□□□ -0.72
CDC42-201ENST00000315554 TIE1P35590 1138 aa10.58□□□□□ -0.72
CDC42-201ENST00000315554 RALBP1Q15311 655 aa10.58□□□□□ -0.72
CDC42-201ENST00000315554 KIF12Q96FN5 646 aa10.58□□□□□ -0.72
CDC42-201ENST00000315554 PRKRIP1Q9H875 184 aaPredicted RBP10.58□□□□□ -0.72
CDC42-201ENST00000315554 IGSF1Q8N6C5 1336 aa10.57□□□□□ -0.72
CDC42-201ENST00000315554 EXOC5O00471 708 aa10.57□□□□□ -0.72
CDC42-201ENST00000315554 HMOX1P09601 288 aa10.57□□□□□ -0.72
CDC42-201ENST00000315554 SULT6B1Q6IMI4 303 aa10.57□□□□□ -0.72
CDC42-201ENST00000315554 MARCH10Q8NA82 808 aaPredicted RBP10.57□□□□□ -0.72
CDC42-201ENST00000315554 DDX54Q8TDD1 881 aaKnown RBP10.57□□□□□ -0.72
CDC42-201ENST00000315554 RAPGEF4Q8WZA2 1011 aa10.57□□□□□ -0.72
CDC42-201ENST00000315554 CFAP53Q96M91 514 aa10.57□□□□□ -0.72
CDC42-201ENST00000315554 PARP4Q9UKK3 1724 aaKnown RBP10.57□□□□□ -0.72
CDC42-201ENST00000315554 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
CDC42-201ENST00000315554 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
CDC42-201ENST00000315554 TNS2Q63HR2 1409 aa10.56□□□□□ -0.72
CDC42-201ENST00000315554 MYBBP1AQ9BQG0 1328 aaKnown RBP10.56□□□□□ -0.72
CDC42-201ENST00000315554 OVOS2A0A0G2JMS6 1433 aa10.55□□□□□ -0.72
CDC42-201ENST00000315554 NCAPD2Q15021 1401 aa10.55□□□□□ -0.72
CDC42-201ENST00000315554 ZCRB1Q8TBF4 217 aaKnown RBP10.55□□□□□ -0.72
CDC42-201ENST00000315554 SOCS7O14512 581 aa10.54□□□□□ -0.72
CDC42-201ENST00000315554 ANP32CO43423 234 aa10.54□□□□□ -0.72
CDC42-201ENST00000315554 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDC42-201ENST00000315554 RGPD1P0DJD0 1748 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms