RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 ATRNO75882 1429 aa24.72■■□□□ 1.55
CDK4-202ENST00000312990 TMPOP42166 694 aaKnown RBP24.72■■□□□ 1.55
CDK4-202ENST00000312990 MTHFSDQ2M296 383 aaKnown RBP24.71■■□□□ 1.55
CDK4-202ENST00000312990 ILDR1Q86SU0 546 aaPredicted RBP24.71■■□□□ 1.55
CDK4-202ENST00000312990 IL2RBP14784 551 aa24.7■■□□□ 1.54
CDK4-202ENST00000312990 TATP17735 454 aaPredicted RBP24.7■■□□□ 1.54
CDK4-202ENST00000312990 NFE2L2Q16236 605 aa24.7■■□□□ 1.54
CDK4-202ENST00000312990 CCDC9Q9Y3X0 531 aaKnown RBP24.69■■□□□ 1.54
CDK4-202ENST00000312990 SALL2Q9Y467 1007 aaPredicted RBP24.69■■□□□ 1.54
CDK4-202ENST00000312990 LRRC37A3O60309 1634 aa24.69■■□□□ 1.54
CDK4-202ENST00000312990 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
CDK4-202ENST00000312990 THRAP3Q9Y2W1 955 aaKnown RBP24.69■■□□□ 1.54
CDK4-202ENST00000312990 THSD7AQ9UPZ6 1657 aa24.67■■□□□ 1.54
CDK4-202ENST00000312990 AMOTQ4VCS5 1084 aa24.66■■□□□ 1.54
CDK4-202ENST00000312990 GAS2L2Q8NHY3 880 aa24.66■■□□□ 1.54
CDK4-202ENST00000312990 TRPC5Q9UL62 973 aaPredicted RBP24.66■■□□□ 1.54
CDK4-202ENST00000312990 ZBED9Q6R2W3 1325 aa24.66■■□□□ 1.54
CDK4-202ENST00000312990 RIPK4P57078 832 aa24.66■■□□□ 1.54
CDK4-202ENST00000312990 PLEKHO1Q53GL0 409 aaPredicted RBP24.66■■□□□ 1.54
CDK4-202ENST00000312990 BARGINQ6ZT62 677 aa24.66■■□□□ 1.54
CDK4-202ENST00000312990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.66■■□□□ 1.54
CDK4-202ENST00000312990 SCN11AQ9UI33 1791 aa24.65■■□□□ 1.54
CDK4-202ENST00000312990 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
CDK4-202ENST00000312990 NCBP3Q53F19 620 aaKnown RBP24.64■■□□□ 1.53
CDK4-202ENST00000312990 TRIM35Q9UPQ4 493 aa24.64■■□□□ 1.53
CDK4-202ENST00000312990 ADAMTS7Q9UKP4 1686 aa24.64■■□□□ 1.53
CDK4-202ENST00000312990 ZNF521Q96K83 1311 aa24.63■■□□□ 1.53
CDK4-202ENST00000312990 NGEFQ8N5V2 710 aa24.63■■□□□ 1.53
CDK4-202ENST00000312990 GJD4Q96KN9 370 aaPredicted RBP24.63■■□□□ 1.53
CDK4-202ENST00000312990 CCDC27Q2M243 656 aa24.62■■□□□ 1.53
CDK4-202ENST00000312990 ZNF530Q6P9A1 599 aaPredicted RBP24.62■■□□□ 1.53
CDK4-202ENST00000312990 QTRT2Q9H974 415 aaKnown RBP24.62■■□□□ 1.53
CDK4-202ENST00000312990 SPG7Q9UQ90 795 aa24.62■■□□□ 1.53
CDK4-202ENST00000312990 TNS2Q63HR2 1409 aa24.61■■□□□ 1.53
CDK4-202ENST00000312990 MAP3K5Q99683 1374 aa24.61■■□□□ 1.53
CDK4-202ENST00000312990 FAM98CQ17RN3 349 aaKnown RBP24.61■■□□□ 1.53
CDK4-202ENST00000312990 WWC1Q8IX03 1113 aa24.61■■□□□ 1.53
CDK4-202ENST00000312990 ZCRB1Q8TBF4 217 aaKnown RBP24.61■■□□□ 1.53
CDK4-202ENST00000312990 CDCA7Q9BWT1 371 aaPredicted RBP24.61■■□□□ 1.53
CDK4-202ENST00000312990 KAT6BQ8WYB5 2073 aa24.61■■□□□ 1.53
CDK4-202ENST00000312990 ZNF772Q68DY9 489 aaPredicted RBP24.6■■□□□ 1.53
CDK4-202ENST00000312990 CYP27B1O15528 508 aa24.59■■□□□ 1.53
CDK4-202ENST00000312990 BRWD3Q6RI45 1802 aa24.58■■□□□ 1.53
CDK4-202ENST00000312990 SIPA1L3O60292 1781 aaPredicted RBP24.58■■□□□ 1.53
CDK4-202ENST00000312990 PCDH11XQ9BZA7 1347 aa24.58■■□□□ 1.53
CDK4-202ENST00000312990 PCDH11YQ9BZA8 1340 aa24.58■■□□□ 1.53
CDK4-202ENST00000312990 GNAT3A8MTJ3 354 aa24.58■■□□□ 1.53
CDK4-202ENST00000312990 AKAP4Q5JQC9 854 aa24.58■■□□□ 1.53
CDK4-202ENST00000312990 RGS17Q9UGC6 210 aaPredicted RBP24.58■■□□□ 1.53
CDK4-202ENST00000312990 PHKG2P15735 406 aa24.57■■□□□ 1.52
CDK4-202ENST00000312990 TOGARAM1Q9Y4F4 1720 aa24.57■■□□□ 1.52
CDK4-202ENST00000312990 DCTN1Q14203 1278 aa24.56■■□□□ 1.52
CDK4-202ENST00000312990 LMOD3Q0VAK6 560 aa24.56■■□□□ 1.52
CDK4-202ENST00000312990 C1orf141Q5JVX7 400 aa24.56■■□□□ 1.52
CDK4-202ENST00000312990 MCM10Q7L590 875 aa24.55■■□□□ 1.52
CDK4-202ENST00000312990 IFNL2Q8IZJ0 200 aa24.55■■□□□ 1.52
CDK4-202ENST00000312990 THUMPD2Q9BTF0 503 aaKnown RBP24.55■■□□□ 1.52
CDK4-202ENST00000312990 KDM6AO15550 1401 aaPredicted RBP24.55■■□□□ 1.52
CDK4-202ENST00000312990 ITGB4P16144 1822 aa24.54■■□□□ 1.52
CDK4-202ENST00000312990 HTATSF1O43719 755 aaKnown RBP24.54■■□□□ 1.52
CDK4-202ENST00000312990 ONECUT3O60422 494 aaPredicted RBP24.54■■□□□ 1.52
CDK4-202ENST00000312990 EXOC5O00471 708 aa24.53■■□□□ 1.52
CDK4-202ENST00000312990 DDB1Q16531 1140 aa24.53■■□□□ 1.52
CDK4-202ENST00000312990 CEMIPQ8WUJ3 1361 aa24.53■■□□□ 1.52
CDK4-202ENST00000312990 IL17REQ8NFR9 667 aa24.53■■□□□ 1.52
CDK4-202ENST00000312990 RTF1Q92541 710 aaKnown RBP24.53■■□□□ 1.52
CDK4-202ENST00000312990 EP400Q96L91 3159 aa24.52■■□□□ 1.52
CDK4-202ENST00000312990 MPRIPQ6WCQ1 1025 aa24.52■■□□□ 1.52
CDK4-202ENST00000312990 DDX54Q8TDD1 881 aaKnown RBP24.52■■□□□ 1.52
CDK4-202ENST00000312990 DOT1LQ8TEK3 1739 aa24.51■■□□□ 1.51
CDK4-202ENST00000312990 WDR63Q8IWG1 891 aa24.51■■□□□ 1.51
CDK4-202ENST00000312990 LGR6Q9HBX8 967 aa24.51■■□□□ 1.51
CDK4-202ENST00000312990 CDCA7LQ96GN5 454 aa24.5■■□□□ 1.51
CDK4-202ENST00000312990 SPINK5Q9NQ38 1064 aaPredicted RBP24.5■■□□□ 1.51
CDK4-202ENST00000312990 RBM6P78332 1123 aaKnown RBP24.5■■□□□ 1.51
CDK4-202ENST00000312990 MRC1P22897 1456 aa24.49■■□□□ 1.51
CDK4-202ENST00000312990 RNMTO43148 476 aaKnown RBP24.49■■□□□ 1.51
CDK4-202ENST00000312990 GOLGA2Q08379 1002 aa24.49■■□□□ 1.51
CDK4-202ENST00000312990 NKX1-1Q15270 411 aaPredicted RBP24.49■■□□□ 1.51
CDK4-202ENST00000312990 A0A0G2JS52 829 aa24.48■■□□□ 1.51
CDK4-202ENST00000312990 MYT1Q01538 1121 aa24.48■■□□□ 1.51
CDK4-202ENST00000312990 POTEAQ6S8J7 498 aa24.48■■□□□ 1.51
CDK4-202ENST00000312990 KDM3BQ7LBC6 1761 aa24.47■■□□□ 1.51
CDK4-202ENST00000312990 DCAF5Q96JK2 942 aa24.47■■□□□ 1.51
CDK4-202ENST00000312990 SBF2Q86WG5 1849 aa24.47■■□□□ 1.51
CDK4-202ENST00000312990 HSP90AB1P08238 724 aaKnown RBP24.46■■□□□ 1.51
CDK4-202ENST00000312990 PDE3BQ13370 1112 aa24.46■■□□□ 1.51
CDK4-202ENST00000312990 SEPT12Q8IYM1 358 aa24.46■■□□□ 1.51
CDK4-202ENST00000312990 MARCH10Q8NA82 808 aaPredicted RBP24.46■■□□□ 1.51
CDK4-202ENST00000312990 IL16Q14005 1332 aa24.46■■□□□ 1.51
CDK4-202ENST00000312990 SLFN5Q08AF3 891 aa24.44■■□□□ 1.5
CDK4-202ENST00000312990 CALD1Q05682 793 aaKnown RBP24.43■■□□□ 1.5
CDK4-202ENST00000312990 ZNF853P0CG23 659 aa24.43■■□□□ 1.5
CDK4-202ENST00000312990 RXRBP28702 533 aa24.43■■□□□ 1.5
CDK4-202ENST00000312990 E9PSI1 815 aa24.42■■□□□ 1.5
CDK4-202ENST00000312990 TRMT2AQ8IZ69 625 aaKnown RBP24.42■■□□□ 1.5
CDK4-202ENST00000312990 IFT57Q9NWB7 429 aa24.42■■□□□ 1.5
CDK4-202ENST00000312990 CFAP44Q96MT7 982 aa24.41■■□□□ 1.5
CDK4-202ENST00000312990 RGS12O14924 1447 aa24.41■■□□□ 1.5
CDK4-202ENST00000312990 PAPPAQ13219 1627 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms