RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 KDM5BQ9UGL1 1544 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 RRP1P56182 461 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 ZNF530Q6P9A1 599 aaPredicted RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 STXBP4Q6ZWJ1 553 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 LRRC59Q96AG4 307 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 SEC63Q9UGP8 760 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 DDX49Q9Y6V7 483 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 A2MP01023 1474 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 TSPOAP1O95153 1857 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 APAF1O14727 1248 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 CETN1Q12798 172 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 TMEM132AQ24JP5 1023 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 TWISTNBQ3B726 338 aaPredicted RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 TTC39AQ5SRH9 613 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 TMEM87AQ8NBN3 555 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 RBM42Q9BTD8 480 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 UGGT2Q9NYU1 1516 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 MAP3K12Q12852 859 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 ALDH1L2Q3SY69 923 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 TEX35Q5T0J7 233 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 BICD2Q8TD16 824 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 NUDT16Q96DE0 195 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 IPO9Q96P70 1041 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 SDF4Q9BRK5 362 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 ANO2Q9NQ90 1003 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 TNRQ92752 1358 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 C19orf44Q9H6X5 657 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 DBF4Q9UBU7 674 aaPredicted RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 PPIP5K1Q6PFW1 1433 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 MPHOSPH10O00566 681 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 SURF6O75683 361 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 RAPGEF3O95398 923 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 GSTO1P78417 241 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 ZSCAN29Q8IWY8 852 aaPredicted RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 TMTC2Q8N394 836 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 PODXL2Q9NZ53 605 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 RBM27Q9P2N5 1060 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 RALGAPBQ86X10 1494 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 RABEP1Q15276 862 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 CCDC69A6NI79 296 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 CDC45O75419 566 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 LRRC45Q96CN5 670 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 UBAC1Q9BSL1 405 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 LRRC27Q9C0I9 530 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.76□□□□□ -1.816e-7■■■■■ 121.8
CLOCK-201ENST00000309964 POLD1P28340 1107 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 TAF7Q15545 349 aaPredicted RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 HSP90B2PQ58FF3 399 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 DDX54Q8TDD1 881 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 UHRF1BP1Q6BDS2 1440 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 GLRX3O76003 335 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 HLA-DOAP06340 250 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 C16orf71Q8IYS4 520 aaPredicted RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 FSD1Q9BTV5 496 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 DEF6Q9H4E7 631 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 IFT57Q9NWB7 429 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 FAM13BQ9NYF5 915 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 LRP2BPQ9P2M1 347 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 RRP7AQ9Y3A4 280 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 ARAP1Q96P48 1450 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 PLEKHH1Q9ULM0 1364 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 USP5P45974 858 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 RBM26Q5T8P6 1007 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 KIF1BPQ96EK5 621 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 NAP1L5Q96NT1 182 aaPredicted RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 PLCH2O75038 1416 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 RBM5P52756 815 aaKnown RBP eCLIP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 AIMP1Q12904 312 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 IFIT5Q13325 482 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 NFE2L2Q16236 605 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 IFNL2Q8IZJ0 200 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 FLAD1Q8NFF5 587 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 SCAF11Q99590 1463 aaKnown RBP3.76□□□□□ -1.81
CLOCK-201ENST00000309964 CFAP43Q8NDM7 1665 aa3.76□□□□□ -1.81
CLOCK-201ENST00000309964 WDR62O43379 1518 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 RFC4P35249 363 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 DDX46Q7L014 1031 aaKnown RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 VPS36Q86VN1 386 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 DDX12PQ92771 950 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 CAVIN2O95810 425 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 KRT18P05783 430 aaKnown RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 KIF5BP33176 963 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 PDE4BQ07343 736 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 RRP12Q5JTH9 1297 aaKnown RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 CFAP70Q5T0N1 1121 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 SULT6B1Q6IMI4 303 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 FMNL2Q96PY5 1086 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 HDAC9Q9UKV0 1011 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 AK9Q5TCS8 1911 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 ELL2O00472 640 aaPredicted RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 PLCG2P16885 1265 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 ARHGEF6Q15052 776 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 PRKAR2BP31323 418 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 IMMTQ16891 758 aaKnown RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 ZNF397Q8NF99 534 aaPredicted RBP3.75□□□□□ -1.81
CLOCK-201ENST00000309964 C22orf23Q9BZE7 217 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 ANKIB1Q9P2G1 1089 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 CYP46A1Q9Y6A2 500 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 MAGI2Q86UL8 1455 aa3.75□□□□□ -1.81
CLOCK-201ENST00000309964 APBB1IPQ7Z5R6 666 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms