RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 SUDS3Q9H7L9 328 aaPredicted RBP18.15■□□□□ 0.5
LEMD3-201ENST00000308330 UGGT2Q9NYU1 1516 aa18.15■□□□□ 0.5
LEMD3-201ENST00000308330 POLR3GO15318 223 aaPredicted RBP18.14■□□□□ 0.5
LEMD3-201ENST00000308330 TPM1P09493 284 aa18.14■□□□□ 0.5
LEMD3-201ENST00000308330 KRT28Q7Z3Y7 464 aa18.14■□□□□ 0.5
LEMD3-201ENST00000308330 EFCC1Q9HA90 598 aa18.14■□□□□ 0.49
LEMD3-201ENST00000308330 ABCC2Q92887 1545 aa18.14■□□□□ 0.49
LEMD3-201ENST00000308330 TOM1O60784 492 aa18.14■□□□□ 0.49
LEMD3-201ENST00000308330 CCP110O43303 1012 aa18.13■□□□□ 0.49
LEMD3-201ENST00000308330 CCDC30Q5VVM6 783 aa18.13■□□□□ 0.49
LEMD3-201ENST00000308330 FBXW7Q969H0 707 aa18.13■□□□□ 0.49
LEMD3-201ENST00000308330 MBD3O95983 291 aa18.13■□□□□ 0.49
LEMD3-201ENST00000308330 ZNF830Q96NB3 372 aaPredicted RBP18.13■□□□□ 0.49
LEMD3-201ENST00000308330 UHRF1BP1LA0JNW5 1464 aa18.13■□□□□ 0.49
LEMD3-201ENST00000308330 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
LEMD3-201ENST00000308330 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
LEMD3-201ENST00000308330 TMCO3Q6UWJ1 677 aa18.12■□□□□ 0.49
LEMD3-201ENST00000308330 CENPHQ9H3R5 247 aa18.12■□□□□ 0.49
LEMD3-201ENST00000308330 IBSPP21815 317 aaPredicted RBP18.11■□□□□ 0.49
LEMD3-201ENST00000308330 ERCC4Q92889 916 aaPredicted RBP18.11■□□□□ 0.49
LEMD3-201ENST00000308330 BMS1Q14692 1282 aaKnown RBP18.11■□□□□ 0.49
LEMD3-201ENST00000308330 TICAM2Q86XR7 235 aa18.11■□□□□ 0.49
LEMD3-201ENST00000308330 EXOSC9Q06265 439 aaKnown RBP18.11■□□□□ 0.49
LEMD3-201ENST00000308330 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
LEMD3-201ENST00000308330 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
LEMD3-201ENST00000308330 TWISTNBQ3B726 338 aaPredicted RBP18.1■□□□□ 0.49
LEMD3-201ENST00000308330 CCDC34Q96HJ3 373 aa18.1■□□□□ 0.49
LEMD3-201ENST00000308330 MAP2K2P36507 400 aa18.1■□□□□ 0.49
LEMD3-201ENST00000308330 HS1BP3Q53T59 392 aa18.1■□□□□ 0.49
LEMD3-201ENST00000308330 ZKSCAN5Q9Y2L8 839 aa18.1■□□□□ 0.49
LEMD3-201ENST00000308330 RPAINQ86UA6 219 aa18.09■□□□□ 0.49
LEMD3-201ENST00000308330 CDCA7LQ96GN5 454 aa18.09■□□□□ 0.49
LEMD3-201ENST00000308330 BECN2A8MW95 431 aa18.09■□□□□ 0.49
LEMD3-201ENST00000308330 UBTFL1P0CB47 393 aaPredicted RBP18.09■□□□□ 0.49
LEMD3-201ENST00000308330 ATP6V1AP38606 617 aa18.09■□□□□ 0.49
LEMD3-201ENST00000308330 KIF6Q6ZMV9 814 aa18.09■□□□□ 0.49
LEMD3-201ENST00000308330 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
LEMD3-201ENST00000308330 NEUROD6Q96NK8 337 aa18.09■□□□□ 0.49
LEMD3-201ENST00000308330 FAM135AQ9P2D6 1515 aa18.08■□□□□ 0.49
LEMD3-201ENST00000308330 EIF3JO75822 258 aaKnown RBP18.08■□□□□ 0.49
LEMD3-201ENST00000308330 ABCC10Q5T3U5 1492 aa18.08■□□□□ 0.49
LEMD3-201ENST00000308330 NOL8Q76FK4 1167 aaKnown RBP18.08■□□□□ 0.48
LEMD3-201ENST00000308330 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.48
LEMD3-201ENST00000308330 KIAA0556O60303 1618 aa18.07■□□□□ 0.48
LEMD3-201ENST00000308330 LRRFIP1Q32MZ4 808 aaKnown RBP18.07■□□□□ 0.48
LEMD3-201ENST00000308330 ZBTB9Q96C00 473 aa18.07■□□□□ 0.48
LEMD3-201ENST00000308330 MSH6P52701 1360 aa18.07■□□□□ 0.48
LEMD3-201ENST00000308330 RABEP1Q15276 862 aa18.07■□□□□ 0.48
LEMD3-201ENST00000308330 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
LEMD3-201ENST00000308330 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
LEMD3-201ENST00000308330 GOLGA6L10A6NI86 522 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
LEMD3-201ENST00000308330 IVLP07476 585 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 RRP12Q5JTH9 1297 aaKnown RBP18.06■□□□□ 0.48
LEMD3-201ENST00000308330 ZMYM3Q14202 1370 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 FOXD4L6Q3SYB3 417 aaPredicted RBP18.06■□□□□ 0.48
LEMD3-201ENST00000308330 FOXD4L3Q6VB84 417 aaPredicted RBP18.06■□□□□ 0.48
LEMD3-201ENST00000308330 DCAF8L1A6NGE4 600 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
LEMD3-201ENST00000308330 FCHSD2O94868 740 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 USHBP1Q8N6Y0 703 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 SPC24Q8NBT2 197 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 ZNF428Q96B54 188 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
LEMD3-201ENST00000308330 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
LEMD3-201ENST00000308330 CIZ1Q9ULV3 898 aaPredicted RBP18.05■□□□□ 0.48
LEMD3-201ENST00000308330 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
LEMD3-201ENST00000308330 KIAA1328Q86T90 577 aa18.05■□□□□ 0.48
LEMD3-201ENST00000308330 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
LEMD3-201ENST00000308330 GBP6Q6ZN66 633 aa18.04■□□□□ 0.48
LEMD3-201ENST00000308330 LMAN1P49257 510 aa18.04■□□□□ 0.48
LEMD3-201ENST00000308330 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
LEMD3-201ENST00000308330 MYL6BP14649 208 aa18.04■□□□□ 0.48
LEMD3-201ENST00000308330 HSP90AB4PQ58FF6 505 aa18.04■□□□□ 0.48
LEMD3-201ENST00000308330 AP1ARQ63HQ0 302 aa18.04■□□□□ 0.48
LEMD3-201ENST00000308330 ACEP12821 1306 aa18.04■□□□□ 0.48
LEMD3-201ENST00000308330 ZNF853P0CG23 659 aa18.04■□□□□ 0.48
LEMD3-201ENST00000308330 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
LEMD3-201ENST00000308330 CCDC70Q6NSX1 233 aa18.03■□□□□ 0.48
LEMD3-201ENST00000308330 ATP6V1DQ9Y5K8 247 aa18.03■□□□□ 0.48
LEMD3-201ENST00000308330 RUFY1Q96T51 708 aa18.03■□□□□ 0.48
LEMD3-201ENST00000308330 MYO6Q9UM54 1294 aa18.03■□□□□ 0.48
LEMD3-201ENST00000308330 BTBD11A6QL63 1104 aa18.02■□□□□ 0.48
LEMD3-201ENST00000308330 CREBRFQ8IUR6 639 aa18.02■□□□□ 0.48
LEMD3-201ENST00000308330 U2AF2P26368 475 aaKnown RBP eCLIP18.02■□□□□ 0.48
LEMD3-201ENST00000308330 LOC102724159A0A0B4J2E5 919 aa18.02■□□□□ 0.47
LEMD3-201ENST00000308330 RAD21O60216 631 aa18.02■□□□□ 0.47
LEMD3-201ENST00000308330 GNAI3P08754 354 aa18.02■□□□□ 0.47
LEMD3-201ENST00000308330 DCTN1Q14203 1278 aa18.02■□□□□ 0.47
LEMD3-201ENST00000308330 PWP2Q15269 919 aaKnown RBP18.02■□□□□ 0.47
LEMD3-201ENST00000308330 UBXN4Q92575 508 aa18.02■□□□□ 0.47
LEMD3-201ENST00000308330 PTPRKQ15262 1439 aa18.01■□□□□ 0.47
LEMD3-201ENST00000308330 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
LEMD3-201ENST00000308330 EXOC5O00471 708 aa18■□□□□ 0.47
LEMD3-201ENST00000308330 PPP2R5AQ15172 486 aa18■□□□□ 0.47
LEMD3-201ENST00000308330 AMOTL1Q8IY63 956 aa18■□□□□ 0.47
LEMD3-201ENST00000308330 TRIM5Q9C035 493 aa18■□□□□ 0.47
LEMD3-201ENST00000308330 C19orf44Q9H6X5 657 aa18■□□□□ 0.47
LEMD3-201ENST00000308330 NINLQ9Y2I6 1382 aa18■□□□□ 0.47
LEMD3-201ENST00000308330 MYRIPQ8NFW9 859 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms