RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 SOS2Q07890 1332 aaPredicted RBP18.22■□□□□ 0.51
CDH16-201ENST00000299752 RBM19Q9Y4C8 960 aaKnown RBP18.21■□□□□ 0.51
CDH16-201ENST00000299752 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
CDH16-201ENST00000299752 GNAI1P63096 354 aa18.21■□□□□ 0.5
CDH16-201ENST00000299752 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.5
CDH16-201ENST00000299752 IFT57Q9NWB7 429 aa18.21■□□□□ 0.5
CDH16-201ENST00000299752 RLBP1P12271 317 aa18.2■□□□□ 0.5
CDH16-201ENST00000299752 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
CDH16-201ENST00000299752 ZNF853P0CG23 659 aa18.19■□□□□ 0.5
CDH16-201ENST00000299752 PHRF1Q9P1Y6 1649 aaKnown RBP18.19■□□□□ 0.5
CDH16-201ENST00000299752 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
CDH16-201ENST00000299752 ERBB3P21860 1342 aa18.18■□□□□ 0.5
CDH16-201ENST00000299752 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
CDH16-201ENST00000299752 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
CDH16-201ENST00000299752 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
CDH16-201ENST00000299752 LTBP4Q8N2S1 1624 aa18.16■□□□□ 0.5
CDH16-201ENST00000299752 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
CDH16-201ENST00000299752 AEBP2Q6ZN18 517 aaPredicted RBP18.15■□□□□ 0.5
CDH16-201ENST00000299752 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
CDH16-201ENST00000299752 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
CDH16-201ENST00000299752 ZNF530Q6P9A1 599 aaPredicted RBP18.15■□□□□ 0.5
CDH16-201ENST00000299752 IL17REQ8NFR9 667 aa18.15■□□□□ 0.5
CDH16-201ENST00000299752 LGR6Q9HBX8 967 aa18.15■□□□□ 0.5
CDH16-201ENST00000299752 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
CDH16-201ENST00000299752 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
CDH16-201ENST00000299752 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
CDH16-201ENST00000299752 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
CDH16-201ENST00000299752 ROBO1Q9Y6N7 1651 aa18.14■□□□□ 0.49
CDH16-201ENST00000299752 VAMP4O75379 141 aa18.14■□□□□ 0.49
CDH16-201ENST00000299752 TRIM27P14373 513 aa18.13■□□□□ 0.49
CDH16-201ENST00000299752 DZIP1LQ8IYY4 767 aaKnown RBP18.13■□□□□ 0.49
CDH16-201ENST00000299752 USP35Q9P2H5 1018 aa18.13■□□□□ 0.49
CDH16-201ENST00000299752 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
CDH16-201ENST00000299752 TWISTNBQ3B726 338 aaPredicted RBP18.12■□□□□ 0.49
CDH16-201ENST00000299752 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
CDH16-201ENST00000299752 TSPYL4Q9UJ04 414 aa18.12■□□□□ 0.49
CDH16-201ENST00000299752 ATF7IPQ6VMQ6 1270 aa18.12■□□□□ 0.49
CDH16-201ENST00000299752 MAP3K5Q99683 1374 aa18.11■□□□□ 0.49
CDH16-201ENST00000299752 CRYBG1Q9Y4K1 1723 aa18.11■□□□□ 0.49
CDH16-201ENST00000299752 NECTIN2Q92692 538 aa18.11■□□□□ 0.49
CDH16-201ENST00000299752 ZNF428Q96B54 188 aa18.11■□□□□ 0.49
CDH16-201ENST00000299752 CRB1P82279 1406 aa18.11■□□□□ 0.49
CDH16-201ENST00000299752 KIF16BQ96L93 1317 aa18.1■□□□□ 0.49
CDH16-201ENST00000299752 CHL1O00533 1208 aa18.1■□□□□ 0.49
CDH16-201ENST00000299752 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
CDH16-201ENST00000299752 RAPGEF4Q8WZA2 1011 aa18.1■□□□□ 0.49
CDH16-201ENST00000299752 NHSL1Q5SYE7 1610 aa18.1■□□□□ 0.49
CDH16-201ENST00000299752 MS4A1P11836 297 aa18.09■□□□□ 0.49
CDH16-201ENST00000299752 PLEKHO1Q53GL0 409 aaPredicted RBP18.09■□□□□ 0.49
CDH16-201ENST00000299752 TOM1L2Q6ZVM7 507 aa18.09■□□□□ 0.49
CDH16-201ENST00000299752 COL18A1P39060 1754 aa18.09■□□□□ 0.49
CDH16-201ENST00000299752 IGHDP01880 384 aa18.09■□□□□ 0.49
CDH16-201ENST00000299752 UBAP1LF5GYI3 381 aa18.08■□□□□ 0.49
CDH16-201ENST00000299752 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.49
CDH16-201ENST00000299752 ADAMTS2O95450 1211 aa18.08■□□□□ 0.48
CDH16-201ENST00000299752 CAMTA1Q9Y6Y1 1673 aa18.08■□□□□ 0.48
CDH16-201ENST00000299752 NUTM2BA6NNL0 878 aaPredicted RBP18.07■□□□□ 0.48
CDH16-201ENST00000299752 NUTM2EB1AL46 878 aaPredicted RBP18.07■□□□□ 0.48
CDH16-201ENST00000299752 C1orf141Q5JVX7 400 aa18.07■□□□□ 0.48
CDH16-201ENST00000299752 NUTM2AQ8IVF1 878 aaPredicted RBP18.07■□□□□ 0.48
CDH16-201ENST00000299752 EVA1CP58658 441 aa18.07■□□□□ 0.48
CDH16-201ENST00000299752 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
CDH16-201ENST00000299752 ITPRIPQ8IWB1 547 aa18.06■□□□□ 0.48
CDH16-201ENST00000299752 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
CDH16-201ENST00000299752 PCDHB15Q9Y5E8 787 aa18.06■□□□□ 0.48
CDH16-201ENST00000299752 CPDO75976 1380 aa18.06■□□□□ 0.48
CDH16-201ENST00000299752 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
CDH16-201ENST00000299752 MEGF6O75095 1541 aa18.06■□□□□ 0.48
CDH16-201ENST00000299752 KCNQ3O43525 872 aa18.05■□□□□ 0.48
CDH16-201ENST00000299752 TATP17735 454 aaPredicted RBP18.05■□□□□ 0.48
CDH16-201ENST00000299752 TMEM57Q8N5G2 664 aa18.05■□□□□ 0.48
CDH16-201ENST00000299752 AAMPQ13685 434 aa18.05■□□□□ 0.48
CDH16-201ENST00000299752 BTG4Q9NY30 223 aa18.05■□□□□ 0.48
CDH16-201ENST00000299752 TOM1O60784 492 aa18.03■□□□□ 0.48
CDH16-201ENST00000299752 AKAP4Q5JQC9 854 aa18.03■□□□□ 0.48
CDH16-201ENST00000299752 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
CDH16-201ENST00000299752 HTATSF1O43719 755 aaKnown RBP18.03■□□□□ 0.48
CDH16-201ENST00000299752 TEFQ10587 303 aa18.03■□□□□ 0.48
CDH16-201ENST00000299752 TAF7Q15545 349 aaPredicted RBP18.03■□□□□ 0.48
CDH16-201ENST00000299752 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
CDH16-201ENST00000299752 DDX19BQ9UMR2 479 aa18.03■□□□□ 0.48
CDH16-201ENST00000299752 WDR17Q8IZU2 1322 aa18.01■□□□□ 0.47
CDH16-201ENST00000299752 RNMTO43148 476 aaKnown RBP18.01■□□□□ 0.47
CDH16-201ENST00000299752 COL5A2P05997 1499 aaPredicted RBP18■□□□□ 0.47
CDH16-201ENST00000299752 NCAPD2Q15021 1401 aa18■□□□□ 0.47
CDH16-201ENST00000299752 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
CDH16-201ENST00000299752 FAM208AQ9UK61 1670 aaKnown RBP18■□□□□ 0.47
CDH16-201ENST00000299752 BTBD11A6QL63 1104 aa17.99■□□□□ 0.47
CDH16-201ENST00000299752 RGS3P49796 1198 aa17.99■□□□□ 0.47
CDH16-201ENST00000299752 CYP27B1O15528 508 aa17.99■□□□□ 0.47
CDH16-201ENST00000299752 DDX54Q8TDD1 881 aaKnown RBP17.99■□□□□ 0.47
CDH16-201ENST00000299752 PHLPP1O60346 1717 aa17.99■□□□□ 0.47
CDH16-201ENST00000299752 EIF2S2P20042 333 aaKnown RBP17.98■□□□□ 0.47
CDH16-201ENST00000299752 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
CDH16-201ENST00000299752 SLC39A6Q13433 755 aa17.98■□□□□ 0.47
CDH16-201ENST00000299752 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
CDH16-201ENST00000299752 CEMIPQ8WUJ3 1361 aa17.97■□□□□ 0.47
CDH16-201ENST00000299752 LMO7Q8WWI1 1683 aa17.97■□□□□ 0.47
CDH16-201ENST00000299752 PHKG2P15735 406 aa17.97■□□□□ 0.47
CDH16-201ENST00000299752 PDE4AP27815 886 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1255.2 ms