RNA–Protein interactions for RNA: ENST00000292314.6

CCDC12-201, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5 BASIC

Gene CCDC12, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-201ENST00000292314 NFE2L2Q16236 605 aa21.29■■□□□ 1
CCDC12-201ENST00000292314 TMPOP42166 694 aaKnown RBP21.28■■□□□ 1
CCDC12-201ENST00000292314 THRAP3Q9Y2W1 955 aaKnown RBP21.28■■□□□ 1
CCDC12-201ENST00000292314 AFF2P51816 1311 aa21.28■■□□□ 1
CCDC12-201ENST00000292314 IL2RBP14784 551 aa21.27■■□□□ 1
CCDC12-201ENST00000292314 NEUROD2Q15784 382 aa21.27■■□□□ 1
CCDC12-201ENST00000292314 CDCA7Q9BWT1 371 aaPredicted RBP21.27■■□□□ 1
CCDC12-201ENST00000292314 USP35Q9P2H5 1018 aa21.27■■□□□ 1
CCDC12-201ENST00000292314 SPG7Q9UQ90 795 aa21.27■■□□□ 1
CCDC12-201ENST00000292314 RIPK4P57078 832 aa21.26■□□□□ 0.99
CCDC12-201ENST00000292314 VPS72Q15906 364 aa21.26■□□□□ 0.99
CCDC12-201ENST00000292314 PHACTR3Q96KR7 559 aa21.26■□□□□ 0.99
CCDC12-201ENST00000292314 SALL2Q9Y467 1007 aaPredicted RBP21.26■□□□□ 0.99
CCDC12-201ENST00000292314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.25■□□□□ 0.99
CCDC12-201ENST00000292314 RRP7AQ9Y3A4 280 aaKnown RBP21.25■□□□□ 0.99
CCDC12-201ENST00000292314 BCL9LQ86UU0 1499 aa21.25■□□□□ 0.99
CCDC12-201ENST00000292314 SPATA31A1Q5TZJ5 1347 aa21.25■□□□□ 0.99
CCDC12-201ENST00000292314 SPATA31A5Q5VU36 1347 aa21.25■□□□□ 0.99
CCDC12-201ENST00000292314 SPATA31A7Q8IWB4 1347 aa21.25■□□□□ 0.99
CCDC12-201ENST00000292314 OVOS2A0A0G2JMS6 1433 aa21.24■□□□□ 0.99
CCDC12-201ENST00000292314 CALD1Q05682 793 aaKnown RBP21.24■□□□□ 0.99
CCDC12-201ENST00000292314 CCDC27Q2M243 656 aa21.24■□□□□ 0.99
CCDC12-201ENST00000292314 C1orf141Q5JVX7 400 aa21.24■□□□□ 0.99
CCDC12-201ENST00000292314 RTF1Q92541 710 aaKnown RBP21.24■□□□□ 0.99
CCDC12-201ENST00000292314 MEGF6O75095 1541 aa21.24■□□□□ 0.99
CCDC12-201ENST00000292314 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
CCDC12-201ENST00000292314 TRPC5Q9UL62 973 aaPredicted RBP21.23■□□□□ 0.99
CCDC12-201ENST00000292314 WNK3Q9BYP7 1800 aa21.22■□□□□ 0.99
CCDC12-201ENST00000292314 MTHFSDQ2M296 383 aaKnown RBP21.22■□□□□ 0.99
CCDC12-201ENST00000292314 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
CCDC12-201ENST00000292314 PKD1L3Q7Z443 1732 aa21.21■□□□□ 0.99
CCDC12-201ENST00000292314 SENP3-EIF4A1A0A087X0R7 540 aa21.21■□□□□ 0.99
CCDC12-201ENST00000292314 CENPBP07199 599 aaPredicted RBP21.21■□□□□ 0.99
CCDC12-201ENST00000292314 ZNF772Q68DY9 489 aaPredicted RBP21.21■□□□□ 0.99
CCDC12-201ENST00000292314 MAP3K5Q99683 1374 aa21.21■□□□□ 0.99
CCDC12-201ENST00000292314 GNAT3A8MTJ3 354 aa21.2■□□□□ 0.98
CCDC12-201ENST00000292314 HTATSF1O43719 755 aaKnown RBP21.2■□□□□ 0.98
CCDC12-201ENST00000292314 PDE3BQ13370 1112 aa21.2■□□□□ 0.98
CCDC12-201ENST00000292314 BARGINQ6ZT62 677 aa21.2■□□□□ 0.98
CCDC12-201ENST00000292314 ZCRB1Q8TBF4 217 aaKnown RBP21.2■□□□□ 0.98
CCDC12-201ENST00000292314 PCDH11XQ9BZA7 1347 aa21.2■□□□□ 0.98
CCDC12-201ENST00000292314 PCDH11YQ9BZA8 1340 aa21.2■□□□□ 0.98
CCDC12-201ENST00000292314 AKAP4Q5JQC9 854 aa21.19■□□□□ 0.98
CCDC12-201ENST00000292314 HSP90AB1P08238 724 aaKnown RBP21.18■□□□□ 0.98
CCDC12-201ENST00000292314 WWC1Q8IX03 1113 aa21.18■□□□□ 0.98
CCDC12-201ENST00000292314 DISP2A7MBM2 1401 aa21.18■□□□□ 0.98
CCDC12-201ENST00000292314 ATRNO75882 1429 aa21.18■□□□□ 0.98
CCDC12-201ENST00000292314 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
CCDC12-201ENST00000292314 WDR63Q8IWG1 891 aa21.17■□□□□ 0.98
CCDC12-201ENST00000292314 RNF216Q9NWF9 866 aaPredicted RBP21.17■□□□□ 0.98
CCDC12-201ENST00000292314 A0A0G2JS52 829 aa21.16■□□□□ 0.98
CCDC12-201ENST00000292314 MYT1Q01538 1121 aa21.16■□□□□ 0.98
CCDC12-201ENST00000292314 IFNL2Q8IZJ0 200 aa21.16■□□□□ 0.98
CCDC12-201ENST00000292314 EXOC5O00471 708 aa21.15■□□□□ 0.98
CCDC12-201ENST00000292314 GJD4Q96KN9 370 aaPredicted RBP21.15■□□□□ 0.98
CCDC12-201ENST00000292314 TNS2Q63HR2 1409 aa21.14■□□□□ 0.98
CCDC12-201ENST00000292314 QTRT2Q9H974 415 aaKnown RBP21.14■□□□□ 0.97
CCDC12-201ENST00000292314 TRIM35Q9UPQ4 493 aa21.14■□□□□ 0.97
CCDC12-201ENST00000292314 IL16Q14005 1332 aa21.13■□□□□ 0.97
CCDC12-201ENST00000292314 ZNF521Q96K83 1311 aa21.13■□□□□ 0.97
CCDC12-201ENST00000292314 DDB1Q16531 1140 aa21.13■□□□□ 0.97
CCDC12-201ENST00000292314 FAM98CQ17RN3 349 aaKnown RBP21.13■□□□□ 0.97
CCDC12-201ENST00000292314 E9PSI1 815 aa21.12■□□□□ 0.97
CCDC12-201ENST00000292314 PHKG2P15735 406 aa21.12■□□□□ 0.97
CCDC12-201ENST00000292314 MYH16Q9H6N6 1097 aa21.12■□□□□ 0.97
CCDC12-201ENST00000292314 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
CCDC12-201ENST00000292314 MCM10Q7L590 875 aa21.1■□□□□ 0.97
CCDC12-201ENST00000292314 DCAF5Q96JK2 942 aa21.1■□□□□ 0.97
CCDC12-201ENST00000292314 LRRC37A3O60309 1634 aa21.1■□□□□ 0.97
CCDC12-201ENST00000292314 GLI3P10071 1580 aa21.1■□□□□ 0.97
CCDC12-201ENST00000292314 GNAI1P63096 354 aa21.09■□□□□ 0.97
CCDC12-201ENST00000292314 TEFQ10587 303 aa21.09■□□□□ 0.97
CCDC12-201ENST00000292314 CYP27B1O15528 508 aa21.08■□□□□ 0.97
CCDC12-201ENST00000292314 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.97
CCDC12-201ENST00000292314 IFT57Q9NWB7 429 aa21.08■□□□□ 0.97
CCDC12-201ENST00000292314 VIRMAQ69YN4 1812 aaKnown RBP21.07■□□□□ 0.96
CCDC12-201ENST00000292314 RNMTO43148 476 aaKnown RBP21.07■□□□□ 0.96
CCDC12-201ENST00000292314 RBM6P78332 1123 aaKnown RBP21.07■□□□□ 0.96
CCDC12-201ENST00000292314 DCTN1Q14203 1278 aa21.07■□□□□ 0.96
CCDC12-201ENST00000292314 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
CCDC12-201ENST00000292314 THSD7AQ9UPZ6 1657 aa21.07■□□□□ 0.96
CCDC12-201ENST00000292314 SCN11AQ9UI33 1791 aa21.06■□□□□ 0.96
CCDC12-201ENST00000292314 THUMPD2Q9BTF0 503 aaKnown RBP21.06■□□□□ 0.96
CCDC12-201ENST00000292314 LAS1LQ9Y4W2 734 aaKnown RBP21.06■□□□□ 0.96
CCDC12-201ENST00000292314 SLFN5Q08AF3 891 aa21.05■□□□□ 0.96
CCDC12-201ENST00000292314 CEMIPQ8WUJ3 1361 aa21.05■□□□□ 0.96
CCDC12-201ENST00000292314 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
CCDC12-201ENST00000292314 IL17REQ8NFR9 667 aa21.04■□□□□ 0.96
CCDC12-201ENST00000292314 CFAP44Q96MT7 982 aa21.04■□□□□ 0.96
CCDC12-201ENST00000292314 ADAMTS7Q9UKP4 1686 aa21.04■□□□□ 0.96
CCDC12-201ENST00000292314 TAF7Q15545 349 aaPredicted RBP21.03■□□□□ 0.96
CCDC12-201ENST00000292314 BABAM1Q9NWV8 329 aa21.03■□□□□ 0.96
CCDC12-201ENST00000292314 ERVV-2B6SEH9 535 aa21.02■□□□□ 0.96
CCDC12-201ENST00000292314 RXRBP28702 533 aa21.02■□□□□ 0.96
CCDC12-201ENST00000292314 CABP4P57796 275 aa21.02■□□□□ 0.96
CCDC12-201ENST00000292314 CDCA7LQ96GN5 454 aa21.02■□□□□ 0.96
CCDC12-201ENST00000292314 KDM6AO15550 1401 aaPredicted RBP21.02■□□□□ 0.96
CCDC12-201ENST00000292314 ONECUT3O60422 494 aaPredicted RBP21.01■□□□□ 0.95
CCDC12-201ENST00000292314 SEPT12Q8IYM1 358 aa21.01■□□□□ 0.95
CCDC12-201ENST00000292314 LGR6Q9HBX8 967 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms