RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CENPHQ9H3R5 247 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 DHX8Q14562 1220 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-201ENST00000291547 ANKRD62A6NC57 917 aa12.73□□□□□ -0.37
PKNOX1-201ENST00000291547 PPFIBP1Q86W92 1011 aa12.73□□□□□ -0.37
PKNOX1-201ENST00000291547 TERF1P54274 439 aa12.73□□□□□ -0.37
PKNOX1-201ENST00000291547 KRI1Q8N9T8 703 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-201ENST00000291547 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
PKNOX1-201ENST00000291547 CCDC181Q5TID7 509 aa12.73□□□□□ -0.37
PKNOX1-201ENST00000291547 TAX1BP1Q86VP1 789 aa12.73□□□□□ -0.37
PKNOX1-201ENST00000291547 SURF6O75683 361 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 TNMDQ9H2S6 317 aa12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 TXLNAP40222 546 aa12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 ENOX2Q16206 610 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 KIF20AO95235 890 aa12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 SEPT7Q16181 437 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 RIC3Q7Z5B4 369 aa12.72□□□□□ -0.37
PKNOX1-201ENST00000291547 EVA1CP58658 441 aa12.71□□□□□ -0.37
PKNOX1-201ENST00000291547 PZPP20742 1482 aa12.71□□□□□ -0.37
PKNOX1-201ENST00000291547 HMOX1P09601 288 aa12.71□□□□□ -0.37
PKNOX1-201ENST00000291547 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-201ENST00000291547 SYCP1Q15431 976 aa12.71□□□□□ -0.37
PKNOX1-201ENST00000291547 JMYQ8N9B5 988 aa12.71□□□□□ -0.37
PKNOX1-201ENST00000291547 GCC2Q8IWJ2 1684 aa12.71□□□□□ -0.37
PKNOX1-201ENST00000291547 FAM193AP78312 1265 aa12.71□□□□□ -0.37
PKNOX1-201ENST00000291547 ABCC1P33527 1531 aa12.71□□□□□ -0.38
PKNOX1-201ENST00000291547 CCAR1Q8IX12 1150 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-201ENST00000291547 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-201ENST00000291547 CWC22Q9HCG8 908 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-201ENST00000291547 LUC7LQ9NQ29 371 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-201ENST00000291547 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 PDCL2Q8N4E4 241 aa12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 IPO4Q8TEX9 1081 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 CDK5RAP3Q96JB5 506 aa12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 ZHX1Q9UKY1 873 aaPredicted RBP12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 INCENPQ9NQS7 918 aa12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 ATP10AO60312 1499 aa12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 FILIP1Q7Z7B0 1213 aa12.7□□□□□ -0.38
PKNOX1-201ENST00000291547 GNAI3P08754 354 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 ME1P48163 572 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 PRAM1Q96QH2 718 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 PAF1Q8N7H5 531 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 DYDC1Q8WWB3 177 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 WDR33Q9C0J8 1336 aaKnown RBP12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 KRT85P78386 507 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 SYTL4Q96C24 671 aaPredicted RBP12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 CDC42BPAQ5VT25 1732 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 UBXN4Q92575 508 aa12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 LRRFIP2Q9Y608 721 aaKnown RBP12.69□□□□□ -0.38
PKNOX1-201ENST00000291547 ANKLE2Q86XL3 938 aa12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 ADGRF5Q8IZF2 1346 aa12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 KRT18P05783 430 aaKnown RBP12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 MCM4P33991 863 aa12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 K7ELQ4 463 aaPredicted RBP12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
PKNOX1-201ENST00000291547 EZRP15311 586 aaKnown RBP12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 RRAGDQ9NQL2 400 aaPredicted RBP12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 IKQ13123 557 aaPredicted RBP12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 NOS1P29475 1434 aa12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 RBM33Q96EV2 1170 aaKnown RBP12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 CYP46A1Q9Y6A2 500 aa12.67□□□□□ -0.38
PKNOX1-201ENST00000291547 HIP1O00291 1037 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 MCM5P33992 734 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 TNRQ92752 1358 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 CBFA2T2O43439 604 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 SLC26A8Q96RN1 970 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 MAST1Q9Y2H9 1570 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 STK3Q13188 491 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 CALCOCO1Q9P1Z2 691 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 STIM1Q13586 685 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 CEP57L1Q8IYX8 460 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 TCP11L2Q8N4U5 519 aa12.66□□□□□ -0.38
PKNOX1-201ENST00000291547 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 LARP1BQ659C4 914 aaKnown RBP12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 GIMAP7Q8NHV1 300 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 TMCO3Q6UWJ1 677 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 CCDC94Q9BW85 323 aaPredicted RBP12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 PRDM10Q9NQV6 1147 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.38
PKNOX1-201ENST00000291547 UTP14CQ5TAP6 766 aaKnown RBP12.65□□□□□ -0.39
PKNOX1-201ENST00000291547 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.39
PKNOX1-201ENST00000291547 LRRIQ1Q96JM4 1722 aa12.64□□□□□ -0.39
PKNOX1-201ENST00000291547 IQCEQ6IPM2 695 aa12.64□□□□□ -0.39
PKNOX1-201ENST00000291547 CBX1P83916 185 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms