RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
CACNA1B-201ENST00000277549 EZRP15311 586 aaKnown RBP23.93■■□□□ 1.42
CACNA1B-201ENST00000277549 RAD54L2Q9Y4B4 1467 aa23.93■■□□□ 1.42
CACNA1B-201ENST00000277549 DZIP1Q86YF9 867 aaKnown RBP23.93■■□□□ 1.42
CACNA1B-201ENST00000277549 KIAA1328Q86T90 577 aa23.93■■□□□ 1.42
CACNA1B-201ENST00000277549 EIF5P55010 431 aaKnown RBP23.92■■□□□ 1.42
CACNA1B-201ENST00000277549 GOPCQ9HD26 462 aa23.92■■□□□ 1.42
CACNA1B-201ENST00000277549 CDCA7LQ96GN5 454 aa23.92■■□□□ 1.42
CACNA1B-201ENST00000277549 ZSCAN25Q6NSZ9 544 aa23.92■■□□□ 1.42
CACNA1B-201ENST00000277549 ZNF354CQ86Y25 554 aa23.91■■□□□ 1.42
CACNA1B-201ENST00000277549 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
CACNA1B-201ENST00000277549 CNTLNQ9NXG0 1405 aa23.91■■□□□ 1.42
CACNA1B-201ENST00000277549 NGLY1Q96IV0 654 aa23.91■■□□□ 1.42
CACNA1B-201ENST00000277549 JAKMIP1Q96N16 626 aaKnown RBP23.91■■□□□ 1.42
CACNA1B-201ENST00000277549 CAMK4Q16566 473 aa23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 SPTY2D1Q68D10 685 aaPredicted RBP23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 VAT1LQ9HCJ6 419 aa23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 TMOD3Q9NYL9 352 aa23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 PDZRN3Q9UPQ7 1066 aa23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 SRGAP3O43295 1099 aa23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 SRCIN1Q9C0H9 1055 aa23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 PIP4K2AP48426 406 aaPredicted RBP23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 LEKR1Q6ZMV7 388 aa23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 MMRN2Q9H8L6 949 aa23.9■■□□□ 1.42
CACNA1B-201ENST00000277549 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.41
CACNA1B-201ENST00000277549 LARP1BQ659C4 914 aaKnown RBP23.88■■□□□ 1.41
CACNA1B-201ENST00000277549 C6orf229H3BNL8 230 aa23.88■■□□□ 1.41
CACNA1B-201ENST00000277549 KLHL10Q6JEL2 608 aa23.88■■□□□ 1.41
CACNA1B-201ENST00000277549 PDRG1Q9NUG6 133 aa23.88■■□□□ 1.41
CACNA1B-201ENST00000277549 CEP126Q9P2H0 1117 aa23.88■■□□□ 1.41
CACNA1B-201ENST00000277549 SERPINA10Q9UK55 444 aa23.88■■□□□ 1.41
CACNA1B-201ENST00000277549 GUCY1B3Q02153 619 aa23.88■■□□□ 1.41
CACNA1B-201ENST00000277549 MYD88Q99836 296 aa23.88■■□□□ 1.41
CACNA1B-201ENST00000277549 RANBP6O60518 1105 aaKnown RBP23.87■■□□□ 1.41
CACNA1B-201ENST00000277549 CAVIN4Q5BKX8 364 aa23.87■■□□□ 1.41
CACNA1B-201ENST00000277549 JMYQ8N9B5 988 aa23.87■■□□□ 1.41
CACNA1B-201ENST00000277549 DACH1Q9UI36 760 aa23.87■■□□□ 1.41
CACNA1B-201ENST00000277549 PUF60Q9UHX1 559 aaKnown RBP23.87■■□□□ 1.41
CACNA1B-201ENST00000277549 POTEJP0CG39 1038 aa23.87■■□□□ 1.41
CACNA1B-201ENST00000277549 FEZ1Q99689 392 aa23.87■■□□□ 1.41
CACNA1B-201ENST00000277549 LUC7LQ9NQ29 371 aaKnown RBP23.87■■□□□ 1.41
CACNA1B-201ENST00000277549 GPTP24298 496 aa23.86■■□□□ 1.41
CACNA1B-201ENST00000277549 STARD3NLO95772 234 aa23.86■■□□□ 1.41
CACNA1B-201ENST00000277549 JAKMIP3Q5VZ66 844 aa23.86■■□□□ 1.41
CACNA1B-201ENST00000277549 ANKLE2Q86XL3 938 aa23.86■■□□□ 1.41
CACNA1B-201ENST00000277549 CCDC144CPQ8IYA2 1237 aa23.86■■□□□ 1.41
CACNA1B-201ENST00000277549 UBE4AQ14139 1066 aa23.85■■□□□ 1.41
CACNA1B-201ENST00000277549 CCDC178Q5BJE1 867 aa23.85■■□□□ 1.41
CACNA1B-201ENST00000277549 FERMT2Q96AC1 680 aa23.85■■□□□ 1.41
CACNA1B-201ENST00000277549 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
CACNA1B-201ENST00000277549 GOLGA6L10A0A0M3HER8 536 aa23.85■■□□□ 1.41
CACNA1B-201ENST00000277549 THEMISQ8N1K5 641 aaPredicted RBP23.85■■□□□ 1.41
CACNA1B-201ENST00000277549 LETM1O95202 739 aaPredicted RBP23.84■■□□□ 1.41
CACNA1B-201ENST00000277549 C16orf71Q8IYS4 520 aaPredicted RBP23.84■■□□□ 1.41
CACNA1B-201ENST00000277549 MAPK8IP2Q13387 824 aaPredicted RBP23.84■■□□□ 1.41
CACNA1B-201ENST00000277549 CWC15Q9P013 229 aaKnown RBP23.84■■□□□ 1.41
CACNA1B-201ENST00000277549 TAF4BQ92750 862 aa23.84■■□□□ 1.41
CACNA1B-201ENST00000277549 SAMM50Q9Y512 469 aa23.84■■□□□ 1.41
CACNA1B-201ENST00000277549 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.83■■□□□ 1.41
CACNA1B-201ENST00000277549 MRPS9P82933 396 aaKnown RBP23.83■■□□□ 1.41
CACNA1B-201ENST00000277549 CUL5Q93034 780 aa23.83■■□□□ 1.41
CACNA1B-201ENST00000277549 SPATA32Q96LK8 384 aa23.83■■□□□ 1.41
CACNA1B-201ENST00000277549 SLC12A5Q9H2X9 1139 aa23.83■■□□□ 1.4
CACNA1B-201ENST00000277549 TRAK2O60296 914 aa23.82■■□□□ 1.4
CACNA1B-201ENST00000277549 PPFIA3O75145 1194 aa23.82■■□□□ 1.4
CACNA1B-201ENST00000277549 KIAA0754O94854 1291 aa23.82■■□□□ 1.4
CACNA1B-201ENST00000277549 USP8P40818 1118 aa23.82■■□□□ 1.4
CACNA1B-201ENST00000277549 F8W031 263 aaPredicted RBP23.82■■□□□ 1.4
CACNA1B-201ENST00000277549 MAP3K9P80192 1104 aa23.82■■□□□ 1.4
CACNA1B-201ENST00000277549 BCCIPQ9P287 314 aaKnown RBP eCLIP23.82■■□□□ 1.4
CACNA1B-201ENST00000277549 TERF1P54274 439 aa23.81■■□□□ 1.4
CACNA1B-201ENST00000277549 ZNF444Q8N0Y2 327 aaPredicted RBP23.81■■□□□ 1.4
CACNA1B-201ENST00000277549 ZNF652Q9Y2D9 606 aa23.8■■□□□ 1.4
CACNA1B-201ENST00000277549 IMMTQ16891 758 aaKnown RBP23.8■■□□□ 1.4
CACNA1B-201ENST00000277549 CCP110O43303 1012 aa23.8■■□□□ 1.4
CACNA1B-201ENST00000277549 CCDC102AQ96A19 550 aa23.8■■□□□ 1.4
CACNA1B-201ENST00000277549 SMARCA5O60264 1052 aaPredicted RBP23.8■■□□□ 1.4
CACNA1B-201ENST00000277549 CCDC150Q8NCX0 1101 aa23.8■■□□□ 1.4
CACNA1B-201ENST00000277549 CASTP20810 708 aaKnown RBP23.8■■□□□ 1.4
CACNA1B-201ENST00000277549 PDCP20941 246 aa23.8■■□□□ 1.4
CACNA1B-201ENST00000277549 LARP6Q9BRS8 491 aaKnown RBP23.79■■□□□ 1.4
CACNA1B-201ENST00000277549 BLOC1S2Q6QNY1 142 aa23.79■■□□□ 1.4
CACNA1B-201ENST00000277549 RAB11FIP4Q86YS3 637 aa23.79■■□□□ 1.4
CACNA1B-201ENST00000277549 DYDC1Q8WWB3 177 aa23.79■■□□□ 1.4
CACNA1B-201ENST00000277549 KIF7Q2M1P5 1343 aa23.79■■□□□ 1.4
CACNA1B-201ENST00000277549 HOMER2Q9NSB8 354 aa23.79■■□□□ 1.4
CACNA1B-201ENST00000277549 RBM26Q5T8P6 1007 aaKnown RBP23.78■■□□□ 1.4
CACNA1B-201ENST00000277549 CDKL5O76039 1030 aa23.78■■□□□ 1.4
CACNA1B-201ENST00000277549 CTNNA2P26232 953 aa23.78■■□□□ 1.4
CACNA1B-201ENST00000277549 NF2P35240 595 aa23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 TRMT112Q9UI30 125 aaKnown RBP23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 MCM10Q7L590 875 aa23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 FILIP1Q7Z7B0 1213 aa23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 C11orf95C9JLR9 678 aaPredicted RBP23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 CCT4P50991 539 aaKnown RBP23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 JARID2Q92833 1246 aaPredicted RBP23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 DNAI2Q9GZS0 605 aa23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 PPP1R12BO60237 982 aaPredicted RBP23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 GRIPAP1Q4V328 841 aa23.77■■□□□ 1.4
CACNA1B-201ENST00000277549 BOLA2Q9H3K6 86 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms