RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 TATP17735 454 aaPredicted RBP22.81■■□□□ 1.24
SKP2-201ENST00000274254 CDCA7Q9BWT1 371 aaPredicted RBP22.81■■□□□ 1.24
SKP2-201ENST00000274254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.79■■□□□ 1.24
SKP2-201ENST00000274254 PKD1L3Q7Z443 1732 aa22.78■■□□□ 1.24
SKP2-201ENST00000274254 MAPK8IP3Q9UPT6 1336 aa22.78■■□□□ 1.24
SKP2-201ENST00000274254 FAM98CQ17RN3 349 aaKnown RBP22.78■■□□□ 1.24
SKP2-201ENST00000274254 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
SKP2-201ENST00000274254 ONECUT3O60422 494 aaPredicted RBP22.77■■□□□ 1.24
SKP2-201ENST00000274254 NEFMP07197 916 aa22.77■■□□□ 1.24
SKP2-201ENST00000274254 AMOTQ4VCS5 1084 aa22.77■■□□□ 1.24
SKP2-201ENST00000274254 THSD7AQ9UPZ6 1657 aa22.76■■□□□ 1.23
SKP2-201ENST00000274254 APAF1O14727 1248 aa22.76■■□□□ 1.23
SKP2-201ENST00000274254 MTHFSDQ2M296 383 aaKnown RBP22.76■■□□□ 1.23
SKP2-201ENST00000274254 PLEKHO1Q53GL0 409 aaPredicted RBP22.76■■□□□ 1.23
SKP2-201ENST00000274254 RBM6P78332 1123 aaKnown RBP22.75■■□□□ 1.23
SKP2-201ENST00000274254 POTEAQ6S8J7 498 aa22.74■■□□□ 1.23
SKP2-201ENST00000274254 GAS2L2Q8NHY3 880 aa22.74■■□□□ 1.23
SKP2-201ENST00000274254 SPG7Q9UQ90 795 aa22.74■■□□□ 1.23
SKP2-201ENST00000274254 LRRC37A3O60309 1634 aa22.74■■□□□ 1.23
SKP2-201ENST00000274254 SHANK3Q9BYB0 1731 aa22.73■■□□□ 1.23
SKP2-201ENST00000274254 TNS2Q63HR2 1409 aa22.73■■□□□ 1.23
SKP2-201ENST00000274254 TMPOP42166 694 aaKnown RBP22.73■■□□□ 1.23
SKP2-201ENST00000274254 NFE2L2Q16236 605 aa22.73■■□□□ 1.23
SKP2-201ENST00000274254 ZCRB1Q8TBF4 217 aaKnown RBP22.73■■□□□ 1.23
SKP2-201ENST00000274254 EXOC5O00471 708 aa22.71■■□□□ 1.23
SKP2-201ENST00000274254 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.22
SKP2-201ENST00000274254 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.22
SKP2-201ENST00000274254 CYP27B1O15528 508 aa22.7■■□□□ 1.22
SKP2-201ENST00000274254 RXRBP28702 533 aa22.7■■□□□ 1.22
SKP2-201ENST00000274254 DDB1Q16531 1140 aa22.7■■□□□ 1.22
SKP2-201ENST00000274254 ZNF530Q6P9A1 599 aaPredicted RBP22.7■■□□□ 1.22
SKP2-201ENST00000274254 DLG5Q8TDM6 1919 aa22.69■■□□□ 1.22
SKP2-201ENST00000274254 NCBP3Q53F19 620 aaKnown RBP22.69■■□□□ 1.22
SKP2-201ENST00000274254 RRP7AQ9Y3A4 280 aaKnown RBP22.69■■□□□ 1.22
SKP2-201ENST00000274254 PHKG2P15735 406 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 RIPK4P57078 832 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 SEPT12Q8IYM1 358 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 NGEFQ8N5V2 710 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 MAP3K5Q99683 1374 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 NEUROD2Q15784 382 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 C1orf141Q5JVX7 400 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 IFNL2Q8IZJ0 200 aa22.67■■□□□ 1.22
SKP2-201ENST00000274254 A0A0G2JS52 829 aa22.66■■□□□ 1.22
SKP2-201ENST00000274254 GNAT3A8MTJ3 354 aa22.66■■□□□ 1.22
SKP2-201ENST00000274254 MYT1Q01538 1121 aa22.66■■□□□ 1.22
SKP2-201ENST00000274254 HNRNPUQ00839 825 aaKnown RBP eCLIP22.65■■□□□ 1.22
SKP2-201ENST00000274254 CCDC27Q2M243 656 aa22.65■■□□□ 1.22
SKP2-201ENST00000274254 DDX54Q8TDD1 881 aaKnown RBP22.65■■□□□ 1.22
SKP2-201ENST00000274254 TRIM35Q9UPQ4 493 aa22.65■■□□□ 1.22
SKP2-201ENST00000274254 HTATSF1O43719 755 aaKnown RBP22.64■■□□□ 1.21
SKP2-201ENST00000274254 NKX1-1Q15270 411 aaPredicted RBP22.64■■□□□ 1.21
SKP2-201ENST00000274254 ADAMTS7Q9UKP4 1686 aa22.62■■□□□ 1.21
SKP2-201ENST00000274254 LMOD3Q0VAK6 560 aa22.62■■□□□ 1.21
SKP2-201ENST00000274254 MARCH10Q8NA82 808 aaPredicted RBP22.62■■□□□ 1.21
SKP2-201ENST00000274254 RGS12O14924 1447 aa22.62■■□□□ 1.21
SKP2-201ENST00000274254 HSP90AB1P08238 724 aaKnown RBP22.62■■□□□ 1.21
SKP2-201ENST00000274254 KDM6AO15550 1401 aaPredicted RBP22.61■■□□□ 1.21
SKP2-201ENST00000274254 BRWD3Q6RI45 1802 aa22.61■■□□□ 1.21
SKP2-201ENST00000274254 PDE3BQ13370 1112 aa22.61■■□□□ 1.21
SKP2-201ENST00000274254 WWC1Q8IX03 1113 aa22.61■■□□□ 1.21
SKP2-201ENST00000274254 SALL2Q9Y467 1007 aaPredicted RBP22.61■■□□□ 1.21
SKP2-201ENST00000274254 MPRIPQ6WCQ1 1025 aa22.6■■□□□ 1.21
SKP2-201ENST00000274254 IL17REQ8NFR9 667 aa22.6■■□□□ 1.21
SKP2-201ENST00000274254 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
SKP2-201ENST00000274254 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
SKP2-201ENST00000274254 DCAF5Q96JK2 942 aa22.6■■□□□ 1.21
SKP2-201ENST00000274254 ZNF521Q96K83 1311 aa22.6■■□□□ 1.21
SKP2-201ENST00000274254 DCTN1Q14203 1278 aa22.59■■□□□ 1.21
SKP2-201ENST00000274254 VIRMAQ69YN4 1812 aaKnown RBP22.59■■□□□ 1.21
SKP2-201ENST00000274254 SCN11AQ9UI33 1791 aa22.59■■□□□ 1.21
SKP2-201ENST00000274254 MCM10Q7L590 875 aa22.58■■□□□ 1.21
SKP2-201ENST00000274254 LGR6Q9HBX8 967 aa22.58■■□□□ 1.21
SKP2-201ENST00000274254 ZBED9Q6R2W3 1325 aa22.57■■□□□ 1.2
SKP2-201ENST00000274254 RNMTO43148 476 aaKnown RBP22.57■■□□□ 1.2
SKP2-201ENST00000274254 BCL9O00512 1426 aa22.57■■□□□ 1.2
SKP2-201ENST00000274254 KRT27Q7Z3Y8 459 aa22.57■■□□□ 1.2
SKP2-201ENST00000274254 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
SKP2-201ENST00000274254 THUMPD2Q9BTF0 503 aaKnown RBP22.57■■□□□ 1.2
SKP2-201ENST00000274254 TOGARAM1Q9Y4F4 1720 aa22.55■■□□□ 1.2
SKP2-201ENST00000274254 MRC1P22897 1456 aa22.54■■□□□ 1.2
SKP2-201ENST00000274254 WDR63Q8IWG1 891 aa22.54■■□□□ 1.2
SKP2-201ENST00000274254 ERVV-2B6SEH9 535 aa22.53■■□□□ 1.2
SKP2-201ENST00000274254 FAM182BQ5T319 152 aa22.52■■□□□ 1.19
SKP2-201ENST00000274254 DOT1LQ8TEK3 1739 aa22.51■■□□□ 1.19
SKP2-201ENST00000274254 SIPA1L3O60292 1781 aaPredicted RBP22.51■■□□□ 1.19
SKP2-201ENST00000274254 CALD1Q05682 793 aaKnown RBP22.51■■□□□ 1.19
SKP2-201ENST00000274254 SLC52A2Q9HAB3 445 aa22.51■■□□□ 1.19
SKP2-201ENST00000274254 IL16Q14005 1332 aa22.5■■□□□ 1.19
SKP2-201ENST00000274254 KAT6BQ8WYB5 2073 aa22.5■■□□□ 1.19
SKP2-201ENST00000274254 TEFQ10587 303 aa22.49■■□□□ 1.19
SKP2-201ENST00000274254 ITGB4P16144 1822 aa22.49■■□□□ 1.19
SKP2-201ENST00000274254 CABP4P57796 275 aa22.48■■□□□ 1.19
SKP2-201ENST00000274254 FAM196AQ6ZSG2 479 aa22.48■■□□□ 1.19
SKP2-201ENST00000274254 ZNF853P0CG23 659 aa22.47■■□□□ 1.19
SKP2-201ENST00000274254 GOLGA2Q08379 1002 aa22.47■■□□□ 1.19
SKP2-201ENST00000274254 TAF7Q15545 349 aaPredicted RBP22.47■■□□□ 1.19
SKP2-201ENST00000274254 NFATC2IPQ8NCF5 419 aa22.47■■□□□ 1.19
SKP2-201ENST00000274254 SBF2Q86WG5 1849 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms