RNA–Protein interactions for RNA: ENST00000267163.4

RB1-201, Transcript of RB transcriptional corepressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RB1, Length 4,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-201ENST00000267163 DBF4Q9UBU7 674 aaPredicted RBP16.12■□□□□ 0.17
RB1-201ENST00000267163 ABCF2Q9UG63 623 aa16.12■□□□□ 0.17
RB1-201ENST00000267163 TMEM2Q9UHN6 1383 aa16.12■□□□□ 0.17
RB1-201ENST00000267163 CT47B1P0C2W7 299 aaPredicted RBP16.12■□□□□ 0.17
RB1-201ENST00000267163 METTL24Q5JXM2 366 aa16.12■□□□□ 0.17
RB1-201ENST00000267163 DNTTIP2Q5QJE6 756 aaKnown RBP16.11■□□□□ 0.17
RB1-201ENST00000267163 INTS3Q68E01 1043 aaKnown RBP16.11■□□□□ 0.17
RB1-201ENST00000267163 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
RB1-201ENST00000267163 TFCP2L1Q9NZI6 479 aa16.11■□□□□ 0.17
RB1-201ENST00000267163 STK11IPQ8N1F8 1099 aa16.11■□□□□ 0.17
RB1-201ENST00000267163 UBE2Q2Q8WVN8 375 aa16.11■□□□□ 0.17
RB1-201ENST00000267163 IFT57Q9NWB7 429 aa16.11■□□□□ 0.17
RB1-201ENST00000267163 RAI14Q9P0K7 980 aa16.11■□□□□ 0.17
RB1-201ENST00000267163 YTHDC2Q9H6S0 1430 aaKnown RBP16.1■□□□□ 0.17
RB1-201ENST00000267163 C6orf229H3BNL8 230 aa16.1■□□□□ 0.17
RB1-201ENST00000267163 ANXA1P04083 346 aa16.1■□□□□ 0.17
RB1-201ENST00000267163 NSD2O96028 1365 aa16.1■□□□□ 0.17
RB1-201ENST00000267163 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.1■□□□□ 0.178e-7■■■■□ 22.5
RB1-201ENST00000267163 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
RB1-201ENST00000267163 AAMPQ13685 434 aa16.1■□□□□ 0.17
RB1-201ENST00000267163 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
RB1-201ENST00000267163 DRC7Q8IY82 874 aa16.1■□□□□ 0.17
RB1-201ENST00000267163 A0A087WZG4 1122 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 IL1RAPL2Q9NP60 686 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 TMOD2Q9NZR1 351 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 LRP2BPQ9P2M1 347 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 F6X3S4 739 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 AACSQ86V21 672 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 FAM98CQ17RN3 349 aaKnown RBP16.09■□□□□ 0.17
RB1-201ENST00000267163 USP21Q9UK80 565 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 ANKRD36BQ8N2N9 1353 aa16.09■□□□□ 0.17
RB1-201ENST00000267163 SLC3A2P08195 630 aaKnown RBP16.08■□□□□ 0.17
RB1-201ENST00000267163 PDE3AQ14432 1141 aa16.08■□□□□ 0.17
RB1-201ENST00000267163 HYPKQ9NX55 129 aa16.08■□□□□ 0.17
RB1-201ENST00000267163 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
RB1-201ENST00000267163 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
RB1-201ENST00000267163 CFAP65Q6ZU64 1925 aaKnown RBP16.08■□□□□ 0.16
RB1-201ENST00000267163 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.16
RB1-201ENST00000267163 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
RB1-201ENST00000267163 NBPF4Q96M43 638 aa16.08■□□□□ 0.16
RB1-201ENST00000267163 TSPOAP1O95153 1857 aa16.08■□□□□ 0.16
RB1-201ENST00000267163 LRRCC1Q9C099 1032 aa16.07■□□□□ 0.16
RB1-201ENST00000267163 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
RB1-201ENST00000267163 TCOF1Q13428 1488 aaKnown RBP16.07■□□□□ 0.16
RB1-201ENST00000267163 IDH1O75874 414 aaKnown RBP16.07■□□□□ 0.16
RB1-201ENST00000267163 SART3Q15020 963 aaKnown RBP16.07■□□□□ 0.16
RB1-201ENST00000267163 DNAAF4Q8WXU2 420 aa16.07■□□□□ 0.16
RB1-201ENST00000267163 IFIT1P09914 478 aaKnown RBP16.06■□□□□ 0.16
RB1-201ENST00000267163 PAXIP1Q6ZW49 1069 aaPredicted RBP16.06■□□□□ 0.16
RB1-201ENST00000267163 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
RB1-201ENST00000267163 FOSBP53539 338 aa16.06■□□□□ 0.16
RB1-201ENST00000267163 PDE4AP27815 886 aa16.06■□□□□ 0.16
RB1-201ENST00000267163 KDM4AO75164 1064 aa16.05■□□□□ 0.16
RB1-201ENST00000267163 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
RB1-201ENST00000267163 NACAP1Q9BZK3 213 aa16.05■□□□□ 0.16
RB1-201ENST00000267163 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
RB1-201ENST00000267163 GZF1Q9H116 711 aaPredicted RBP16.05■□□□□ 0.16
RB1-201ENST00000267163 PRAG1Q86YV5 1406 aa16.05■□□□□ 0.16
RB1-201ENST00000267163 DDX46Q7L014 1031 aaKnown RBP16.05■□□□□ 0.16
RB1-201ENST00000267163 NFATC2IPQ8NCF5 419 aa16.05■□□□□ 0.16
RB1-201ENST00000267163 NPATQ14207 1427 aa16.05■□□□□ 0.16
RB1-201ENST00000267163 SSH1Q8WYL5 1049 aa16.05■□□□□ 0.16
RB1-201ENST00000267163 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 TMEM94Q12767 1356 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 TRPM2O94759 1503 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 POLD1P28340 1107 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 PPP1R42Q7Z4L9 355 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 FLT4P35916 1363 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 SLFN5Q08AF3 891 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 EXOC6BQ9Y2D4 811 aa16.04■□□□□ 0.16
RB1-201ENST00000267163 ABCC11Q96J66 1382 aa16.03■□□□□ 0.16
RB1-201ENST00000267163 MAP4K4O95819 1239 aaPredicted RBP16.03■□□□□ 0.16
RB1-201ENST00000267163 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
RB1-201ENST00000267163 SETDB2Q96T68 719 aa16.03■□□□□ 0.16
RB1-201ENST00000267163 CDC45O75419 566 aa16.03■□□□□ 0.16
RB1-201ENST00000267163 GCC1Q96CN9 775 aa16.03■□□□□ 0.16
RB1-201ENST00000267163 FLIIQ13045 1269 aa16.03■□□□□ 0.16
RB1-201ENST00000267163 MVPQ14764 893 aaKnown RBP16.03■□□□□ 0.16
RB1-201ENST00000267163 IP6K1Q92551 441 aa16.03■□□□□ 0.16
RB1-201ENST00000267163 AKAP4Q5JQC9 854 aa16.02■□□□□ 0.16
RB1-201ENST00000267163 TMEM57Q8N5G2 664 aa16.02■□□□□ 0.16
RB1-201ENST00000267163 JARID2Q92833 1246 aaPredicted RBP16.02■□□□□ 0.16
RB1-201ENST00000267163 EYA1Q99502 592 aa16.02■□□□□ 0.16
RB1-201ENST00000267163 RTCBQ9Y3I0 505 aaKnown RBP16.02■□□□□ 0.16
RB1-201ENST00000267163 CHD1O14646 1710 aa16.02■□□□□ 0.16
RB1-201ENST00000267163 ANKRD18BA2A2Z9 1011 aa16.02■□□□□ 0.16
RB1-201ENST00000267163 SAFBQ15424 915 aaKnown RBP eCLIP16.02■□□□□ 0.16
RB1-201ENST00000267163 SYAP1Q96A49 352 aaPredicted RBP16.02■□□□□ 0.16
RB1-201ENST00000267163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.02■□□□□ 0.16
RB1-201ENST00000267163 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.15
RB1-201ENST00000267163 ST5P78524 1137 aa16.02■□□□□ 0.15
RB1-201ENST00000267163 PI4KAP2A4QPH2 592 aa16.01■□□□□ 0.15
RB1-201ENST00000267163 HIP1O00291 1037 aa16.01■□□□□ 0.15
RB1-201ENST00000267163 PI4KAP1Q8N8J0 262 aa16.01■□□□□ 0.15
RB1-201ENST00000267163 SIRT1Q96EB6 747 aa16.01■□□□□ 0.15
RB1-201ENST00000267163 HOXC9P31274 260 aa16.01■□□□□ 0.15
RB1-201ENST00000267163 PDZRN3Q9UPQ7 1066 aa16.01■□□□□ 0.15
RB1-201ENST00000267163 MAP3K2Q9Y2U5 619 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms