RNA–Protein interactions for RNA: ENST00000264917.9

PDE8B-201, Transcript of phosphodiesterase 8B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE8B, Length 5,956 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-201ENST00000264917 TRIM5Q9C035 493 aa19.46■□□□□ 0.71
PDE8B-201ENST00000264917 SIL1Q9H173 461 aa19.46■□□□□ 0.71
PDE8B-201ENST00000264917 ABCC10Q5T3U5 1492 aa19.46■□□□□ 0.71
PDE8B-201ENST00000264917 NASPP49321 788 aaPredicted RBP19.46■□□□□ 0.71
PDE8B-201ENST00000264917 UGGT2Q9NYU1 1516 aa19.46■□□□□ 0.71
PDE8B-201ENST00000264917 CDC45O75419 566 aa19.46■□□□□ 0.71
PDE8B-201ENST00000264917 NOM1Q5C9Z4 860 aaKnown RBP19.46■□□□□ 0.71
PDE8B-201ENST00000264917 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
PDE8B-201ENST00000264917 CNTROBQ8N137 903 aa19.44■□□□□ 0.7
PDE8B-201ENST00000264917 CDK5RAP3Q96JB5 506 aa19.44■□□□□ 0.7
PDE8B-201ENST00000264917 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.44■□□□□ 0.7
PDE8B-201ENST00000264917 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
PDE8B-201ENST00000264917 CTTNBP2Q8WZ74 1663 aa19.44■□□□□ 0.7
PDE8B-201ENST00000264917 ACEP12821 1306 aa19.44■□□□□ 0.7
PDE8B-201ENST00000264917 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
PDE8B-201ENST00000264917 C19orf44Q9H6X5 657 aa19.43■□□□□ 0.7
PDE8B-201ENST00000264917 PSMA5P28066 241 aa19.43■□□□□ 0.7
PDE8B-201ENST00000264917 PNISRQ8TF01 805 aaKnown RBP19.43■□□□□ 0.7
PDE8B-201ENST00000264917 CCDC39Q9UFE4 941 aa19.43■□□□□ 0.7
PDE8B-201ENST00000264917 CCDC191Q8NCU4 936 aa19.42■□□□□ 0.7
PDE8B-201ENST00000264917 SURF6O75683 361 aaKnown RBP19.42■□□□□ 0.7
PDE8B-201ENST00000264917 KRT18P05783 430 aaKnown RBP19.42■□□□□ 0.7
PDE8B-201ENST00000264917 NFKBIBQ15653 356 aa19.42■□□□□ 0.7
PDE8B-201ENST00000264917 PLCD4Q9BRC7 762 aa19.42■□□□□ 0.7
PDE8B-201ENST00000264917 TBC1D2BQ9UPU7 963 aa19.42■□□□□ 0.7
PDE8B-201ENST00000264917 RFC4P35249 363 aa19.42■□□□□ 0.7
PDE8B-201ENST00000264917 SART3Q15020 963 aaKnown RBP19.42■□□□□ 0.7
PDE8B-201ENST00000264917 NBPF14Q5TI25 921 aa19.42■□□□□ 0.7
PDE8B-201ENST00000264917 DCTN1Q14203 1278 aa19.41■□□□□ 0.7
PDE8B-201ENST00000264917 HMGB2P26583 209 aaKnown RBP19.41■□□□□ 0.7
PDE8B-201ENST00000264917 KINO60870 393 aaKnown RBP19.4■□□□□ 0.7
PDE8B-201ENST00000264917 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
PDE8B-201ENST00000264917 MAGEC2Q9UBF1 373 aaPredicted RBP19.4■□□□□ 0.7
PDE8B-201ENST00000264917 ANKIB1Q9P2G1 1089 aa19.4■□□□□ 0.7
PDE8B-201ENST00000264917 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.7
PDE8B-201ENST00000264917 LRRC59Q96AG4 307 aaKnown RBP19.39■□□□□ 0.7
PDE8B-201ENST00000264917 C1orf115Q9H7X2 142 aa19.39■□□□□ 0.7
PDE8B-201ENST00000264917 ATP10AO60312 1499 aa19.39■□□□□ 0.7
PDE8B-201ENST00000264917 KCNA6P17658 529 aa19.39■□□□□ 0.7
PDE8B-201ENST00000264917 CLASRPQ8N2M8 674 aaKnown RBP19.39■□□□□ 0.7
PDE8B-201ENST00000264917 SPC24Q8NBT2 197 aa19.39■□□□□ 0.7
PDE8B-201ENST00000264917 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.7
PDE8B-201ENST00000264917 C14orf93Q9H972 538 aaKnown RBP19.39■□□□□ 0.7
PDE8B-201ENST00000264917 RDXP35241 583 aaKnown RBP19.39■□□□□ 0.69
PDE8B-201ENST00000264917 TTC39AQ5SRH9 613 aa19.39■□□□□ 0.69
PDE8B-201ENST00000264917 C16orf71Q8IYS4 520 aaPredicted RBP19.39■□□□□ 0.69
PDE8B-201ENST00000264917 NEFHP12036 1026 aa19.39■□□□□ 0.69
PDE8B-201ENST00000264917 NEK4P51957 841 aa19.39■□□□□ 0.69
PDE8B-201ENST00000264917 TWISTNBQ3B726 338 aaPredicted RBP19.39■□□□□ 0.69
PDE8B-201ENST00000264917 RPGRQ92834 1020 aaKnown RBP19.39■□□□□ 0.69
PDE8B-201ENST00000264917 TSR2Q969E8 191 aaKnown RBP19.39■□□□□ 0.69
PDE8B-201ENST00000264917 CLEC11AQ9Y240 323 aa19.39■□□□□ 0.69
PDE8B-201ENST00000264917 EMILIN1Q9Y6C2 1016 aa19.39■□□□□ 0.69
PDE8B-201ENST00000264917 FIBPO43427 364 aa19.39■□□□□ 0.69
PDE8B-201ENST00000264917 SYCP1Q15431 976 aa19.39■□□□□ 0.69
PDE8B-201ENST00000264917 AXDND1Q5T1B0 1012 aaPredicted RBP19.39■□□□□ 0.69
PDE8B-201ENST00000264917 DHX37Q8IY37 1157 aaKnown RBP19.39■□□□□ 0.69
PDE8B-201ENST00000264917 ZNF652Q9Y2D9 606 aa19.39■□□□□ 0.69
PDE8B-201ENST00000264917 ANKRD24Q8TF21 1146 aa19.38■□□□□ 0.69
PDE8B-201ENST00000264917 PRPF40AO75400 957 aaKnown RBP19.38■□□□□ 0.69
PDE8B-201ENST00000264917 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
PDE8B-201ENST00000264917 TSPYL1Q9H0U9 437 aa19.38■□□□□ 0.69
PDE8B-201ENST00000264917 DUOX2Q9NRD8 1548 aa19.38■□□□□ 0.69
PDE8B-201ENST00000264917 TFCP2L1Q9NZI6 479 aa19.38■□□□□ 0.69
PDE8B-201ENST00000264917 GNL3LQ9NVN8 582 aaKnown RBP19.38■□□□□ 0.69
PDE8B-201ENST00000264917 FILIP1LQ4L180 1135 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 MCM10Q7L590 875 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 FANCIQ9NVI1 1328 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 DDB1Q16531 1140 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 WWC2Q6AWC2 1192 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 ERCC4Q92889 916 aaPredicted RBP19.37■□□□□ 0.69
PDE8B-201ENST00000264917 ZHX3Q9H4I2 956 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 CCDC57Q2TAC2 916 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 MPNDQ8N594 471 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 MYO6Q9UM54 1294 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 STK3Q13188 491 aa19.37■□□□□ 0.69
PDE8B-201ENST00000264917 SMARCE1Q969G3 411 aa19.36■□□□□ 0.69
PDE8B-201ENST00000264917 ANKRD62A6NC57 917 aa19.36■□□□□ 0.69
PDE8B-201ENST00000264917 IBSPP21815 317 aaPredicted RBP19.36■□□□□ 0.69
PDE8B-201ENST00000264917 GPTP24298 496 aa19.36■□□□□ 0.69
PDE8B-201ENST00000264917 EXOSC9Q06265 439 aaKnown RBP19.35■□□□□ 0.69
PDE8B-201ENST00000264917 POLD1P28340 1107 aa19.35■□□□□ 0.69
PDE8B-201ENST00000264917 MRE11P49959 708 aa19.35■□□□□ 0.69
PDE8B-201ENST00000264917 STK38Q15208 465 aa19.35■□□□□ 0.69
PDE8B-201ENST00000264917 TXLNAP40222 546 aa19.35■□□□□ 0.69
PDE8B-201ENST00000264917 TRAK2O60296 914 aa19.35■□□□□ 0.69
PDE8B-201ENST00000264917 PDCL3Q9H2J4 239 aa19.35■□□□□ 0.69
PDE8B-201ENST00000264917 TSPY26PQ9H489 355 aa19.35■□□□□ 0.69
PDE8B-201ENST00000264917 FBLN1P23142 703 aa19.34■□□□□ 0.69
PDE8B-201ENST00000264917 BTG4Q9NY30 223 aa19.34■□□□□ 0.69
PDE8B-201ENST00000264917 TSPOAP1O95153 1857 aa19.33■□□□□ 0.69
PDE8B-201ENST00000264917 IGHMBP2P38935 993 aaKnown RBP19.33■□□□□ 0.68
PDE8B-201ENST00000264917 ITSN2Q9NZM3 1697 aa19.32■□□□□ 0.68
PDE8B-201ENST00000264917 MAP4K4O95819 1239 aaPredicted RBP19.32■□□□□ 0.68
PDE8B-201ENST00000264917 RBM10P98175 930 aaKnown RBP19.32■□□□□ 0.68
PDE8B-201ENST00000264917 SLC3A2P08195 630 aaKnown RBP19.32■□□□□ 0.68
PDE8B-201ENST00000264917 ATP6V1AP38606 617 aa19.32■□□□□ 0.68
PDE8B-201ENST00000264917 CWC15Q9P013 229 aaKnown RBP19.32■□□□□ 0.68
PDE8B-201ENST00000264917 AMOTQ4VCS5 1084 aa19.32■□□□□ 0.68
PDE8B-201ENST00000264917 SERPINC1P01008 464 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms