RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 CCDC91Q7Z6B0 441 aa17.69■□□□□ 0.42
NID1-201ENST00000264187 SRCIN1Q9C0H9 1055 aa17.69■□□□□ 0.42
NID1-201ENST00000264187 CNTLNQ9NXG0 1405 aa17.69■□□□□ 0.42
NID1-201ENST00000264187 TNNT1P13805 278 aa17.69■□□□□ 0.42
NID1-201ENST00000264187 ESPNB1AK53 854 aa17.69■□□□□ 0.42
NID1-201ENST00000264187 SULT6B1Q6IMI4 303 aa17.69■□□□□ 0.42
NID1-201ENST00000264187 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
NID1-201ENST00000264187 CTNNBL1Q8WYA6 563 aaPredicted RBP17.68■□□□□ 0.42
NID1-201ENST00000264187 GSTTP1A0A1W2PQM5 241 aa17.68■□□□□ 0.42
NID1-201ENST00000264187 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
NID1-201ENST00000264187 IDH1O75874 414 aaKnown RBP17.68■□□□□ 0.42
NID1-201ENST00000264187 CCDC178Q5BJE1 867 aa17.68■□□□□ 0.42
NID1-201ENST00000264187 UBA5Q9GZZ9 404 aa17.68■□□□□ 0.42
NID1-201ENST00000264187 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
NID1-201ENST00000264187 SHTN1A0MZ66 631 aa17.67■□□□□ 0.42
NID1-201ENST00000264187 POLR3GO15318 223 aaPredicted RBP17.67■□□□□ 0.42
NID1-201ENST00000264187 NUTM2BA6NNL0 878 aaPredicted RBP17.67■□□□□ 0.42
NID1-201ENST00000264187 NUTM2EB1AL46 878 aaPredicted RBP17.67■□□□□ 0.42
NID1-201ENST00000264187 NUTM2AQ8IVF1 878 aaPredicted RBP17.67■□□□□ 0.42
NID1-201ENST00000264187 PSMD1Q99460 953 aa17.67■□□□□ 0.42
NID1-201ENST00000264187 CDKL5O76039 1030 aa17.67■□□□□ 0.42
NID1-201ENST00000264187 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
NID1-201ENST00000264187 SMTNL1A8MU46 457 aa17.67■□□□□ 0.42
NID1-201ENST00000264187 RNF187Q5TA31 235 aaPredicted RBP17.67■□□□□ 0.42
NID1-201ENST00000264187 LRP2BPQ9P2M1 347 aa17.67■□□□□ 0.42
NID1-201ENST00000264187 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
NID1-201ENST00000264187 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
NID1-201ENST00000264187 ZNF397Q8NF99 534 aaPredicted RBP17.66■□□□□ 0.42
NID1-201ENST00000264187 URI1O94763 535 aaPredicted RBP17.66■□□□□ 0.42
NID1-201ENST00000264187 NUTM1Q86Y26 1132 aa17.66■□□□□ 0.42
NID1-201ENST00000264187 IFFO1Q0D2I5 559 aa17.66■□□□□ 0.42
NID1-201ENST00000264187 SPA17Q15506 151 aa17.66■□□□□ 0.42
NID1-201ENST00000264187 MAP3K11Q16584 847 aa17.65■□□□□ 0.42
NID1-201ENST00000264187 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
NID1-201ENST00000264187 SCLT1Q96NL6 688 aa17.65■□□□□ 0.42
NID1-201ENST00000264187 SERPINA10Q9UK55 444 aa17.65■□□□□ 0.42
NID1-201ENST00000264187 CHD1LQ86WJ1 897 aa17.65■□□□□ 0.42
NID1-201ENST00000264187 CPLX3Q8WVH0 158 aa17.65■□□□□ 0.42
NID1-201ENST00000264187 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
NID1-201ENST00000264187 CCT4P50991 539 aaKnown RBP17.65■□□□□ 0.42
NID1-201ENST00000264187 ZSCAN25Q6NSZ9 544 aa17.65■□□□□ 0.42
NID1-201ENST00000264187 CEP63Q96MT8 703 aa17.65■□□□□ 0.42
NID1-201ENST00000264187 GPRASP1Q5JY77 1395 aa17.64■□□□□ 0.42
NID1-201ENST00000264187 PTPN14Q15678 1187 aa17.64■□□□□ 0.42
NID1-201ENST00000264187 LUZP1Q86V48 1076 aa17.64■□□□□ 0.42
NID1-201ENST00000264187 IPO4Q8TEX9 1081 aaKnown RBP17.64■□□□□ 0.41
NID1-201ENST00000264187 KIF4BQ2VIQ3 1234 aa17.64■□□□□ 0.41
NID1-201ENST00000264187 TOM1L2Q6ZVM7 507 aa17.64■□□□□ 0.41
NID1-201ENST00000264187 CCDC82Q8N4S0 544 aa17.64■□□□□ 0.41
NID1-201ENST00000264187 MCM4P33991 863 aa17.64■□□□□ 0.41
NID1-201ENST00000264187 CCDC83Q8IWF9 413 aa17.64■□□□□ 0.41
NID1-201ENST00000264187 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
NID1-201ENST00000264187 GUCY1B3Q02153 619 aa17.63■□□□□ 0.41
NID1-201ENST00000264187 POTEJP0CG39 1038 aa17.63■□□□□ 0.41
NID1-201ENST00000264187 SFPQP23246 707 aaKnown RBP eCLIP17.63■□□□□ 0.41
NID1-201ENST00000264187 CASQ1P31415 396 aa17.63■□□□□ 0.41
NID1-201ENST00000264187 TRMT1LQ7Z2T5 733 aaKnown RBP17.63■□□□□ 0.41
NID1-201ENST00000264187 CACNA2D4Q7Z3S7 1137 aa17.63■□□□□ 0.41
NID1-201ENST00000264187 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
NID1-201ENST00000264187 TTC16Q8NEE8 873 aa17.63■□□□□ 0.41
NID1-201ENST00000264187 ZFP91Q96JP5 570 aaPredicted RBP17.63■□□□□ 0.41
NID1-201ENST00000264187 TRMT1Q9NXH9 659 aaKnown RBP17.63■□□□□ 0.41
NID1-201ENST00000264187 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
NID1-201ENST00000264187 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
NID1-201ENST00000264187 CETN2P41208 172 aa17.62■□□□□ 0.41
NID1-201ENST00000264187 CEP126Q9P2H0 1117 aa17.62■□□□□ 0.41
NID1-201ENST00000264187 PUS7Q96PZ0 661 aaKnown RBP17.62■□□□□ 0.41
NID1-201ENST00000264187 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
NID1-201ENST00000264187 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
NID1-201ENST00000264187 LIG1P18858 919 aa17.62■□□□□ 0.41
NID1-201ENST00000264187 AIDAQ96BJ3 306 aa17.61■□□□□ 0.41
NID1-201ENST00000264187 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
NID1-201ENST00000264187 ZNF644Q9H582 1327 aaPredicted RBP17.61■□□□□ 0.41
NID1-201ENST00000264187 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
NID1-201ENST00000264187 ZSCAN31Q96LW9 406 aaPredicted RBP17.61■□□□□ 0.41
NID1-201ENST00000264187 C11orf95C9JLR9 678 aaPredicted RBP17.61■□□□□ 0.41
NID1-201ENST00000264187 PDE3AQ14432 1141 aa17.61■□□□□ 0.41
NID1-201ENST00000264187 CTNNA3Q9UI47 895 aa17.61■□□□□ 0.41
NID1-201ENST00000264187 MINDY4BA8MYZ0 360 aa17.6■□□□□ 0.41
NID1-201ENST00000264187 PPP1R12BO60237 982 aaPredicted RBP17.6■□□□□ 0.41
NID1-201ENST00000264187 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.6■□□□□ 0.41
NID1-201ENST00000264187 KIF5CO60282 957 aa17.6■□□□□ 0.41
NID1-201ENST00000264187 STAMBPO95630 424 aa17.6■□□□□ 0.41
NID1-201ENST00000264187 GPATCH11Q8N954 259 aa17.6■□□□□ 0.41
NID1-201ENST00000264187 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
NID1-201ENST00000264187 IMMTQ16891 758 aaKnown RBP17.6■□□□□ 0.41
NID1-201ENST00000264187 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
NID1-201ENST00000264187 XPCQ01831 940 aaPredicted RBP17.59■□□□□ 0.41
NID1-201ENST00000264187 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
NID1-201ENST00000264187 EXOC6BQ9Y2D4 811 aa17.59■□□□□ 0.41
NID1-201ENST00000264187 ATF7IPQ6VMQ6 1270 aa17.59■□□□□ 0.41
NID1-201ENST00000264187 COMMD10Q9Y6G5 202 aa17.59■□□□□ 0.41
NID1-201ENST00000264187 FKBP15Q5T1M5 1219 aa17.59■□□□□ 0.41
NID1-201ENST00000264187 LARP1Q6PKG0 1096 aaKnown RBP17.59■□□□□ 0.41
NID1-201ENST00000264187 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
NID1-201ENST00000264187 GBP3Q9H0R5 595 aa17.59■□□□□ 0.41
NID1-201ENST00000264187 TDRD12Q587J7 1177 aaKnown RBP17.59■□□□□ 0.41
NID1-201ENST00000264187 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.41
NID1-201ENST00000264187 WASF1Q92558 559 aa17.58■□□□□ 0.41
NID1-201ENST00000264187 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms