RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 MBIPQ9NS73 344 aa18.26■□□□□ 0.51
XRCC1-201ENST00000262887 VGFO15240 615 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-201ENST00000262887 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
XRCC1-201ENST00000262887 GTF2E1P29083 439 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-201ENST00000262887 OTUD7AQ8TE49 926 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-201ENST00000262887 CFAP65Q6ZU64 1925 aaKnown RBP18.26■□□□□ 0.51
XRCC1-201ENST00000262887 CAMSAP1Q5T5Y3 1602 aa18.25■□□□□ 0.51
XRCC1-201ENST00000262887 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
XRCC1-201ENST00000262887 STK26Q9P289 416 aa18.25■□□□□ 0.51
XRCC1-201ENST00000262887 ZFYVE9O95405 1425 aa18.25■□□□□ 0.51
XRCC1-201ENST00000262887 PRIMPOLQ96LW4 560 aa18.25■□□□□ 0.51
XRCC1-201ENST00000262887 HMOX1P09601 288 aa18.24■□□□□ 0.51
XRCC1-201ENST00000262887 CDC42BPGQ6DT37 1551 aa18.24■□□□□ 0.51
XRCC1-201ENST00000262887 KNDC1Q76NI1 1749 aa18.24■□□□□ 0.51
XRCC1-201ENST00000262887 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
XRCC1-201ENST00000262887 HMGN5P82970 282 aaKnown RBP18.23■□□□□ 0.51
XRCC1-201ENST00000262887 SYAP1Q96A49 352 aaPredicted RBP18.23■□□□□ 0.51
XRCC1-201ENST00000262887 APBB1O00213 710 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 GGT6Q6P531 493 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
XRCC1-201ENST00000262887 KIF24Q5T7B8 1368 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 ZBTB7CA1YPR0 619 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 ANKRD44Q8N8A2 993 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 ERC2O15083 957 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 RAPGEF3O95398 923 aa18.22■□□□□ 0.51
XRCC1-201ENST00000262887 MINK1Q8N4C8 1332 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-201ENST00000262887 KIDINS220Q9ULH0 1771 aa18.21■□□□□ 0.51
XRCC1-201ENST00000262887 ZNF853P0CG23 659 aa18.21■□□□□ 0.51
XRCC1-201ENST00000262887 SMARCA5O60264 1052 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-201ENST00000262887 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
XRCC1-201ENST00000262887 TMX3Q96JJ7 454 aa18.21■□□□□ 0.51
XRCC1-201ENST00000262887 NAP1L2Q9ULW6 460 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-201ENST00000262887 GTF2F1P35269 517 aaKnown RBP eCLIP18.2■□□□□ 0.5
XRCC1-201ENST00000262887 NEK4P51957 841 aa18.2■□□□□ 0.5
XRCC1-201ENST00000262887 ZNF710Q8N1W2 664 aa18.2■□□□□ 0.5
XRCC1-201ENST00000262887 JARID2Q92833 1246 aaPredicted RBP18.2■□□□□ 0.5
XRCC1-201ENST00000262887 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
XRCC1-201ENST00000262887 BRD1O95696 1058 aa18.19■□□□□ 0.5
XRCC1-201ENST00000262887 FBLN1P23142 703 aa18.19■□□□□ 0.5
XRCC1-201ENST00000262887 NOLC1Q14978 699 aaKnown RBP eCLIP18.19■□□□□ 0.5
XRCC1-201ENST00000262887 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-201ENST00000262887 ATP10DQ9P241 1426 aa18.19■□□□□ 0.5
XRCC1-201ENST00000262887 PHF14O94880 888 aa18.19■□□□□ 0.5
XRCC1-201ENST00000262887 TSC1Q92574 1164 aa18.19■□□□□ 0.5
XRCC1-201ENST00000262887 POLKQ9UBT6 870 aa18.19■□□□□ 0.5
XRCC1-201ENST00000262887 NEXMIFQ5QGS0 1516 aa18.18■□□□□ 0.5
XRCC1-201ENST00000262887 CEP85Q6P2H3 762 aa18.18■□□□□ 0.5
XRCC1-201ENST00000262887 MCM2P49736 904 aa18.17■□□□□ 0.5
XRCC1-201ENST00000262887 UVSSAQ2YD98 709 aa18.17■□□□□ 0.5
XRCC1-201ENST00000262887 ZNF830Q96NB3 372 aaPredicted RBP18.17■□□□□ 0.5
XRCC1-201ENST00000262887 CBX1P83916 185 aa18.17■□□□□ 0.5
XRCC1-201ENST00000262887 FAM184AQ8NB25 1140 aa18.17■□□□□ 0.5
XRCC1-201ENST00000262887 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
XRCC1-201ENST00000262887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.16■□□□□ 0.5
XRCC1-201ENST00000262887 MPNDQ8N594 471 aa18.16■□□□□ 0.5
XRCC1-201ENST00000262887 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
XRCC1-201ENST00000262887 LMOD3Q0VAK6 560 aa18.16■□□□□ 0.5
XRCC1-201ENST00000262887 KIF3AQ9Y496 699 aa18.16■□□□□ 0.5
XRCC1-201ENST00000262887 ABCC3O15438 1527 aa18.15■□□□□ 0.5
XRCC1-201ENST00000262887 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
XRCC1-201ENST00000262887 CABP1Q9NZU7 370 aa18.15■□□□□ 0.5
XRCC1-201ENST00000262887 FOXD4L6Q3SYB3 417 aaPredicted RBP18.14■□□□□ 0.5
XRCC1-201ENST00000262887 FOXD4L3Q6VB84 417 aaPredicted RBP18.14■□□□□ 0.5
XRCC1-201ENST00000262887 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.49
XRCC1-201ENST00000262887 CUL4AQ13619 759 aa18.14■□□□□ 0.49
XRCC1-201ENST00000262887 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
XRCC1-201ENST00000262887 RIMS2Q9UQ26 1411 aa18.14■□□□□ 0.49
XRCC1-201ENST00000262887 USP25Q9UHP3 1055 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 RIMBP3CA6NJZ7 1639 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 RIMBP3BA6NNM3 1639 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 RIMBP3Q9UFD9 1639 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 TTC12Q9H892 705 aaPredicted RBP18.13■□□□□ 0.49
XRCC1-201ENST00000262887 GDPD2Q9HCC8 539 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 RTL1A6NKG5 1358 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 MSH6P52701 1360 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 PTPRMP28827 1452 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 HECW2Q9P2P5 1572 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 FKBP5Q13451 457 aaPredicted RBP18.13■□□□□ 0.49
XRCC1-201ENST00000262887 SPTLC3Q9NUV7 552 aa18.13■□□□□ 0.49
XRCC1-201ENST00000262887 YTHDC2Q9H6S0 1430 aaKnown RBP18.12■□□□□ 0.49
XRCC1-201ENST00000262887 GADD45BO75293 160 aaPredicted RBP18.12■□□□□ 0.49
XRCC1-201ENST00000262887 ADCY5O95622 1261 aa18.12■□□□□ 0.49
XRCC1-201ENST00000262887 MCCP23508 829 aa18.12■□□□□ 0.49
XRCC1-201ENST00000262887 ATP2B3Q16720 1220 aa18.12■□□□□ 0.49
XRCC1-201ENST00000262887 C17orf53Q8N3J3 647 aaPredicted RBP18.12■□□□□ 0.49
XRCC1-201ENST00000262887 INTS4Q96HW7 963 aaKnown RBP18.12■□□□□ 0.49
XRCC1-201ENST00000262887 ARHGEF40Q8TER5 1519 aa18.12■□□□□ 0.49
XRCC1-201ENST00000262887 KIF20AO95235 890 aa18.12■□□□□ 0.49
XRCC1-201ENST00000262887 FRMPD1Q5SYB0 1578 aa18.11■□□□□ 0.49
XRCC1-201ENST00000262887 PIK3C2BO00750 1634 aa18.11■□□□□ 0.49
XRCC1-201ENST00000262887 MEIS3Q99687 375 aa18.11■□□□□ 0.49
XRCC1-201ENST00000262887 CDK19Q9BWU1 502 aa18.11■□□□□ 0.49
XRCC1-201ENST00000262887 EMILIN1Q9Y6C2 1016 aa18.11■□□□□ 0.49
XRCC1-201ENST00000262887 CLTCQ00610 1675 aaKnown RBP18.11■□□□□ 0.49
XRCC1-201ENST00000262887 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
XRCC1-201ENST00000262887 FAM177BA6PVY3 158 aa18.1■□□□□ 0.49
XRCC1-201ENST00000262887 IL13P35225 146 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms