RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
GSDMD-201ENST00000262580 CRB1P82279 1406 aa23.86■■□□□ 1.41
GSDMD-201ENST00000262580 BCAR3O75815 825 aa23.86■■□□□ 1.41
GSDMD-201ENST00000262580 UBAP1LF5GYI3 381 aa23.86■■□□□ 1.41
GSDMD-201ENST00000262580 RTF1Q92541 710 aaKnown RBP23.86■■□□□ 1.41
GSDMD-201ENST00000262580 CFAP44Q96MT7 982 aa23.86■■□□□ 1.41
GSDMD-201ENST00000262580 MBIPQ9NS73 344 aa23.86■■□□□ 1.41
GSDMD-201ENST00000262580 ERICH6BQ5W0A0 696 aa23.85■■□□□ 1.41
GSDMD-201ENST00000262580 GNAT3A8MTJ3 354 aa23.84■■□□□ 1.41
GSDMD-201ENST00000262580 RARSP54136 660 aaKnown RBP23.83■■□□□ 1.41
GSDMD-201ENST00000262580 MEGF6O75095 1541 aa23.83■■□□□ 1.41
GSDMD-201ENST00000262580 HTATSF1O43719 755 aaKnown RBP23.83■■□□□ 1.4
GSDMD-201ENST00000262580 CT47B1P0C2W7 299 aaPredicted RBP23.82■■□□□ 1.4
GSDMD-201ENST00000262580 PLEKHO1Q53GL0 409 aaPredicted RBP23.81■■□□□ 1.4
GSDMD-201ENST00000262580 WDR17Q8IZU2 1322 aa23.81■■□□□ 1.4
GSDMD-201ENST00000262580 COL14A1Q05707 1796 aaKnown RBP23.81■■□□□ 1.4
GSDMD-201ENST00000262580 VIRMAQ69YN4 1812 aaKnown RBP23.8■■□□□ 1.4
GSDMD-201ENST00000262580 AMOTQ4VCS5 1084 aa23.8■■□□□ 1.4
GSDMD-201ENST00000262580 C20orf194Q5TEA3 1177 aa23.79■■□□□ 1.4
GSDMD-201ENST00000262580 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
GSDMD-201ENST00000262580 BCL2L13Q9BXK5 485 aa23.79■■□□□ 1.4
GSDMD-201ENST00000262580 CHL1O00533 1208 aa23.78■■□□□ 1.4
GSDMD-201ENST00000262580 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.78■■□□□ 1.4
GSDMD-201ENST00000262580 IL17REQ8NFR9 667 aa23.78■■□□□ 1.4
GSDMD-201ENST00000262580 RAPGEF4Q8WZA2 1011 aa23.78■■□□□ 1.4
GSDMD-201ENST00000262580 PKD1L3Q7Z443 1732 aa23.77■■□□□ 1.4
GSDMD-201ENST00000262580 AKAP4Q5JQC9 854 aa23.76■■□□□ 1.39
GSDMD-201ENST00000262580 CERKQ8TCT0 537 aa23.76■■□□□ 1.39
GSDMD-201ENST00000262580 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
GSDMD-201ENST00000262580 TATP17735 454 aaPredicted RBP23.75■■□□□ 1.39
GSDMD-201ENST00000262580 TOM1L2Q6ZVM7 507 aa23.75■■□□□ 1.39
GSDMD-201ENST00000262580 TSPYL6Q8N831 410 aa23.75■■□□□ 1.39
GSDMD-201ENST00000262580 EXOC6Q8TAG9 804 aa23.75■■□□□ 1.39
GSDMD-201ENST00000262580 STRN4Q9NRL3 753 aa23.75■■□□□ 1.39
GSDMD-201ENST00000262580 CEMIPQ8WUJ3 1361 aa23.75■■□□□ 1.39
GSDMD-201ENST00000262580 PPP4R2Q9NY27 417 aa23.75■■□□□ 1.39
GSDMD-201ENST00000262580 C8orf58Q8NAV2 365 aa23.74■■□□□ 1.39
GSDMD-201ENST00000262580 MIS18AQ9NYP9 233 aa23.74■■□□□ 1.39
GSDMD-201ENST00000262580 PLCH1Q4KWH8 1693 aa23.74■■□□□ 1.39
GSDMD-201ENST00000262580 LARP1Q6PKG0 1096 aaKnown RBP23.73■■□□□ 1.39
GSDMD-201ENST00000262580 SSH1Q8WYL5 1049 aa23.73■■□□□ 1.39
GSDMD-201ENST00000262580 CRBNQ96SW2 442 aa23.73■■□□□ 1.39
GSDMD-201ENST00000262580 PLEKHG2Q9H7P9 1386 aa23.73■■□□□ 1.39
GSDMD-201ENST00000262580 ADAMTS7Q9UKP4 1686 aa23.73■■□□□ 1.39
GSDMD-201ENST00000262580 C1orf141Q5JVX7 400 aa23.73■■□□□ 1.39
GSDMD-201ENST00000262580 LGR6Q9HBX8 967 aa23.73■■□□□ 1.39
GSDMD-201ENST00000262580 BTG4Q9NY30 223 aa23.73■■□□□ 1.39
GSDMD-201ENST00000262580 TSPYL4Q9UJ04 414 aa23.73■■□□□ 1.39
GSDMD-201ENST00000262580 ELL2O00472 640 aaPredicted RBP23.72■■□□□ 1.39
GSDMD-201ENST00000262580 VAMP4O75379 141 aa23.72■■□□□ 1.39
GSDMD-201ENST00000262580 FRAT1Q92837 279 aaPredicted RBP23.72■■□□□ 1.39
GSDMD-201ENST00000262580 SMC4Q9NTJ3 1288 aa23.72■■□□□ 1.39
GSDMD-201ENST00000262580 OVOS2A0A0G2JMS6 1433 aa23.72■■□□□ 1.39
GSDMD-201ENST00000262580 CANXP27824 592 aaKnown RBP23.71■■□□□ 1.39
GSDMD-201ENST00000262580 EVA1CP58658 441 aa23.71■■□□□ 1.39
GSDMD-201ENST00000262580 KRT24Q2M2I5 525 aa23.71■■□□□ 1.39
GSDMD-201ENST00000262580 TWISTNBQ3B726 338 aaPredicted RBP23.71■■□□□ 1.39
GSDMD-201ENST00000262580 MPRIPQ6WCQ1 1025 aa23.71■■□□□ 1.39
GSDMD-201ENST00000262580 CARD10Q9BWT7 1032 aa23.7■■□□□ 1.39
GSDMD-201ENST00000262580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.69■■□□□ 1.38
GSDMD-201ENST00000262580 KDM3BQ7LBC6 1761 aa23.69■■□□□ 1.38
GSDMD-201ENST00000262580 SIPA1L3O60292 1781 aaPredicted RBP23.68■■□□□ 1.38
GSDMD-201ENST00000262580 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
GSDMD-201ENST00000262580 ALDH1L2Q3SY69 923 aa23.68■■□□□ 1.38
GSDMD-201ENST00000262580 ZNF428Q96B54 188 aa23.68■■□□□ 1.38
GSDMD-201ENST00000262580 SPG7Q9UQ90 795 aa23.68■■□□□ 1.38
GSDMD-201ENST00000262580 NRAPQ86VF7 1730 aa23.68■■□□□ 1.38
GSDMD-201ENST00000262580 SCN11AQ9UI33 1791 aa23.68■■□□□ 1.38
GSDMD-201ENST00000262580 RNMTO43148 476 aaKnown RBP23.68■■□□□ 1.38
GSDMD-201ENST00000262580 TAF7Q15545 349 aaPredicted RBP23.68■■□□□ 1.38
GSDMD-201ENST00000262580 SHANK3Q9BYB0 1731 aa23.67■■□□□ 1.38
GSDMD-201ENST00000262580 B4GALNT3Q6L9W6 998 aa23.67■■□□□ 1.38
GSDMD-201ENST00000262580 TNNQ9UQP3 1299 aa23.67■■□□□ 1.38
GSDMD-201ENST00000262580 NUTM2BA6NNL0 878 aaPredicted RBP23.66■■□□□ 1.38
GSDMD-201ENST00000262580 NUTM2EB1AL46 878 aaPredicted RBP23.66■■□□□ 1.38
GSDMD-201ENST00000262580 PHKG2P15735 406 aa23.66■■□□□ 1.38
GSDMD-201ENST00000262580 NUTM2AQ8IVF1 878 aaPredicted RBP23.66■■□□□ 1.38
GSDMD-201ENST00000262580 KDM6AO15550 1401 aaPredicted RBP23.66■■□□□ 1.38
GSDMD-201ENST00000262580 PDE3AQ14432 1141 aa23.65■■□□□ 1.38
GSDMD-201ENST00000262580 BABAM1Q9NWV8 329 aa23.65■■□□□ 1.38
GSDMD-201ENST00000262580 PANK1Q8TE04 598 aa23.64■■□□□ 1.37
GSDMD-201ENST00000262580 CYP27B1O15528 508 aa23.63■■□□□ 1.37
GSDMD-201ENST00000262580 IL2RBP14784 551 aa23.63■■□□□ 1.37
GSDMD-201ENST00000262580 TEFQ10587 303 aa23.63■■□□□ 1.37
GSDMD-201ENST00000262580 IFNL2Q8IZJ0 200 aa23.63■■□□□ 1.37
GSDMD-201ENST00000262580 JCADQ9P266 1359 aa23.63■■□□□ 1.37
GSDMD-201ENST00000262580 TCERG1O14776 1098 aaKnown RBP23.63■■□□□ 1.37
GSDMD-201ENST00000262580 ZKSCAN2Q63HK3 967 aa23.63■■□□□ 1.37
GSDMD-201ENST00000262580 MRPL50Q8N5N7 158 aaKnown RBP23.63■■□□□ 1.37
GSDMD-201ENST00000262580 USP35Q9P2H5 1018 aa23.63■■□□□ 1.37
GSDMD-201ENST00000262580 KIF16BQ96L93 1317 aa23.62■■□□□ 1.37
GSDMD-201ENST00000262580 NOB1Q9ULX3 412 aaKnown RBP23.62■■□□□ 1.37
GSDMD-201ENST00000262580 WNK3Q9BYP7 1800 aa23.62■■□□□ 1.37
GSDMD-201ENST00000262580 RLBP1P12271 317 aa23.61■■□□□ 1.37
GSDMD-201ENST00000262580 NWD2Q9ULI1 1742 aa23.61■■□□□ 1.37
GSDMD-201ENST00000262580 BRPF1P55201 1214 aaPredicted RBP23.6■■□□□ 1.37
GSDMD-201ENST00000262580 ZCRB1Q8TBF4 217 aaKnown RBP23.6■■□□□ 1.37
GSDMD-201ENST00000262580 TRIM27P14373 513 aa23.59■■□□□ 1.37
GSDMD-201ENST00000262580 CLUAP1Q96AJ1 413 aa23.59■■□□□ 1.37
GSDMD-201ENST00000262580 MRC1P22897 1456 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms