RNA–Protein interactions for RNA: ENST00000261523.9

RORA-201, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-201ENST00000261523 NRKQ7Z2Y5 1582 aa8.9□□□□□ -0.98
RORA-201ENST00000261523 BTG4Q9NY30 223 aa8.9□□□□□ -0.99
RORA-201ENST00000261523 CCDC9Q9Y3X0 531 aaKnown RBP8.9□□□□□ -0.99
RORA-201ENST00000261523 CPDO75976 1380 aa8.9□□□□□ -0.99
RORA-201ENST00000261523 USP6P35125 1406 aa8.9□□□□□ -0.99
RORA-201ENST00000261523 MTHFSP49914 203 aa8.89□□□□□ -0.99
RORA-201ENST00000261523 AKAP12Q02952 1782 aa8.89□□□□□ -0.99
RORA-201ENST00000261523 AAMPQ13685 434 aa8.89□□□□□ -0.99
RORA-201ENST00000261523 CCDC27Q2M243 656 aa8.89□□□□□ -0.99
RORA-201ENST00000261523 ABTB2Q8N961 1025 aa8.89□□□□□ -0.99
RORA-201ENST00000261523 KIAA0232Q92628 1395 aa8.88□□□□□ -0.99
RORA-201ENST00000261523 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
RORA-201ENST00000261523 ANO8Q9HCE9 1232 aaPredicted RBP8.88□□□□□ -0.99
RORA-201ENST00000261523 CABP2Q9NPB3 220 aa8.88□□□□□ -0.99
RORA-201ENST00000261523 PDZRN3Q9UPQ7 1066 aa8.88□□□□□ -0.99
RORA-201ENST00000261523 SEPT12Q8IYM1 358 aa8.88□□□□□ -0.99
RORA-201ENST00000261523 THSD7AQ9UPZ6 1657 aa8.87□□□□□ -0.99
RORA-201ENST00000261523 SPATA31A5Q5VU36 1347 aa8.87□□□□□ -0.99
RORA-201ENST00000261523 SPATA31A7Q8IWB4 1347 aa8.87□□□□□ -0.99
RORA-201ENST00000261523 LMO7Q8WWI1 1683 aa8.87□□□□□ -0.99
RORA-201ENST00000261523 SLIT3O75094 1523 aa8.87□□□□□ -0.99
RORA-201ENST00000261523 KRT27Q7Z3Y8 459 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 BCL2L13Q9BXK5 485 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 MON2Q7Z3U7 1717 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 PIK3C2AO00443 1686 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 TTC21AQ8NDW8 1320 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 SF3B2Q13435 895 aaKnown RBP8.86□□□□□ -0.99
RORA-201ENST00000261523 BECN1Q14457 450 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 CFAP53Q96M91 514 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 TBC1D32Q96NH3 1257 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 PUS7Q96PZ0 661 aaKnown RBP8.86□□□□□ -0.99
RORA-201ENST00000261523 ANTXR1Q9H6X2 564 aa8.86□□□□□ -0.99
RORA-201ENST00000261523 ABCC6O95255 1503 aa8.85□□□□□ -0.99
RORA-201ENST00000261523 RGPD1P0DJD0 1748 aa8.85□□□□□ -0.99
RORA-201ENST00000261523 A0A0G2JS52 829 aa8.85□□□□□ -0.99
RORA-201ENST00000261523 PODXL2Q9NZ53 605 aa8.85□□□□□ -0.99
RORA-201ENST00000261523 USP54Q70EL1 1684 aa8.85□□□□□ -0.99
RORA-201ENST00000261523 CPSF1Q10570 1443 aaKnown RBP8.85□□□□□ -0.99
RORA-201ENST00000261523 ANKRD36BQ8N2N9 1353 aa8.85□□□□□ -0.99
RORA-201ENST00000261523 SPATA31A1Q5TZJ5 1347 aa8.85□□□□□ -0.99
RORA-201ENST00000261523 GCP02774 474 aa8.84□□□□□ -0.99
RORA-201ENST00000261523 ZC3H6P61129 1189 aaKnown RBP8.84□□□□□ -0.99
RORA-201ENST00000261523 MVPQ14764 893 aaKnown RBP8.84□□□□□ -0.99
RORA-201ENST00000261523 FAM98CQ17RN3 349 aaKnown RBP8.84□□□□□ -0.99
RORA-201ENST00000261523 RWDD1Q9H446 243 aaPredicted RBP8.84□□□□□ -0.99
RORA-201ENST00000261523 MYH16Q9H6N6 1097 aa8.84□□□□□ -0.99
RORA-201ENST00000261523 NSD2O96028 1365 aa8.84□□□□□ -0.99
RORA-201ENST00000261523 NUTM2GQ5VZR2 741 aa8.84□□□□□ -0.99
RORA-201ENST00000261523 KCNH5Q8NCM2 988 aa8.84□□□□□ -0.99
RORA-201ENST00000261523 AATKQ6ZMQ8 1374 aa8.84□□□□□ -1
RORA-201ENST00000261523 CAMTA1Q9Y6Y1 1673 aa8.84□□□□□ -1
RORA-201ENST00000261523 COL3A1P02461 1466 aaPredicted RBP8.83□□□□□ -1
RORA-201ENST00000261523 U2AF1L5P0DN76 240 aaPredicted RBP8.83□□□□□ -1
RORA-201ENST00000261523 EVA1CP58658 441 aa8.83□□□□□ -1
RORA-201ENST00000261523 NLRP6P59044 892 aa8.83□□□□□ -1
RORA-201ENST00000261523 U2AF1Q01081 240 aaKnown RBP eCLIP8.83□□□□□ -1
RORA-201ENST00000261523 BARGINQ6ZT62 677 aa8.83□□□□□ -1
RORA-201ENST00000261523 TBC1D2Q9BYX2 928 aa8.83□□□□□ -1
RORA-201ENST00000261523 THRAP3Q9Y2W1 955 aaKnown RBP8.83□□□□□ -1
RORA-201ENST00000261523 COL5A2P05997 1499 aaPredicted RBP8.83□□□□□ -1
RORA-201ENST00000261523 ANKRD26Q9UPS8 1709 aa8.83□□□□□ -1
RORA-201ENST00000261523 CHRNA2Q15822 529 aa8.82□□□□□ -1
RORA-201ENST00000261523 ZKSCAN2Q63HK3 967 aa8.82□□□□□ -1
RORA-201ENST00000261523 PLEKHF1Q96S99 279 aa8.82□□□□□ -1
RORA-201ENST00000261523 SLKQ9H2G2 1235 aaPredicted RBP8.82□□□□□ -1
RORA-201ENST00000261523 ZRANB1Q9UGI0 708 aa8.82□□□□□ -1
RORA-201ENST00000261523 PARP4Q9UKK3 1724 aaKnown RBP8.82□□□□□ -1
RORA-201ENST00000261523 TTC21BQ7Z4L5 1316 aa8.82□□□□□ -1
RORA-201ENST00000261523 DZIP1LQ8IYY4 767 aaKnown RBP8.82□□□□□ -1
RORA-201ENST00000261523 TSR2Q969E8 191 aaKnown RBP8.82□□□□□ -1
RORA-201ENST00000261523 STRN4Q9NRL3 753 aa8.82□□□□□ -1
RORA-201ENST00000261523 TRIM35Q9UPQ4 493 aa8.82□□□□□ -1
RORA-201ENST00000261523 CRB1P82279 1406 aa8.81□□□□□ -1
RORA-201ENST00000261523 CT47B1P0C2W7 299 aaPredicted RBP8.81□□□□□ -1
RORA-201ENST00000261523 EXOSC9Q06265 439 aaKnown RBP8.81□□□□□ -1
RORA-201ENST00000261523 HDGFL2Q7Z4V5 671 aaPredicted RBP8.81□□□□□ -1
RORA-201ENST00000261523 UPF2Q9HAU5 1272 aaKnown RBP8.81□□□□□ -1
RORA-201ENST00000261523 TERF2IPQ9NYB0 399 aa8.81□□□□□ -1
RORA-201ENST00000261523 DISP2A7MBM2 1401 aa8.81□□□□□ -1
RORA-201ENST00000261523 EDC4Q6P2E9 1401 aaKnown RBP8.81□□□□□ -1
RORA-201ENST00000261523 COL18A1P39060 1754 aa8.81□□□□□ -1
RORA-201ENST00000261523 MYCNP04198 464 aaPredicted RBP8.81□□□□□ -1
RORA-201ENST00000261523 TMPOP42166 694 aaKnown RBP8.81□□□□□ -1
RORA-201ENST00000261523 BAG6P46379 1132 aa8.81□□□□□ -1
RORA-201ENST00000261523 SRCAPQ6ZRS2 3230 aa8.8□□□□□ -1
RORA-201ENST00000261523 A0A1W2PP64 1363 aa8.8□□□□□ -1
RORA-201ENST00000261523 USP31Q70CQ4 1352 aa8.8□□□□□ -1
RORA-201ENST00000261523 WNK3Q9BYP7 1800 aa8.8□□□□□ -1
RORA-201ENST00000261523 HDAC1Q13547 482 aaPredicted RBP8.8□□□□□ -1
RORA-201ENST00000261523 SSH1Q8WYL5 1049 aa8.8□□□□□ -1
RORA-201ENST00000261523 TNS1Q9HBL0 1735 aaKnown RBP8.8□□□□□ -1
RORA-201ENST00000261523 NFAT5O94916 1531 aa8.8□□□□□ -1
RORA-201ENST00000261523 TRIM27P14373 513 aa8.79□□□□□ -1
RORA-201ENST00000261523 FAM196AQ6ZSG2 479 aa8.79□□□□□ -1
RORA-201ENST00000261523 FTSJ3Q8IY81 847 aaKnown RBP8.79□□□□□ -1
RORA-201ENST00000261523 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
RORA-201ENST00000261523 SMC4Q9NTJ3 1288 aa8.79□□□□□ -1
RORA-201ENST00000261523 CD163L1Q9NR16 1453 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms