RNA–Protein interactions for RNA: ENST00000261489.6

TSC22D1-201, Transcript of TSC22 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-201ENST00000261489 NFAT5O94916 1531 aa11.51□□□□□ -0.57
TSC22D1-201ENST00000261489 GNAT3A8MTJ3 354 aa11.51□□□□□ -0.57
TSC22D1-201ENST00000261489 RRP1P56182 461 aaKnown RBP11.51□□□□□ -0.57
TSC22D1-201ENST00000261489 C8orf58Q8NAV2 365 aa11.51□□□□□ -0.57
TSC22D1-201ENST00000261489 HSPA1LP34931 641 aa11.5□□□□□ -0.57
TSC22D1-201ENST00000261489 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
TSC22D1-201ENST00000261489 TRMT2AQ8IZ69 625 aaKnown RBP11.5□□□□□ -0.57
TSC22D1-201ENST00000261489 EXOC6Q8TAG9 804 aa11.5□□□□□ -0.57
TSC22D1-201ENST00000261489 GAS2L2Q8NHY3 880 aa11.5□□□□□ -0.57
TSC22D1-201ENST00000261489 MYT1Q01538 1121 aa11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 C1orf141Q5JVX7 400 aa11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 TSPYL4Q9UJ04 414 aa11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 PRKCSHP14314 528 aaPredicted RBP11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 NGLY1Q96IV0 654 aa11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 KCNQ3O43525 872 aa11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 PLEKHO1Q53GL0 409 aaPredicted RBP11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 PANK1Q8TE04 598 aa11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 SMC4Q9NTJ3 1288 aa11.49□□□□□ -0.57
TSC22D1-201ENST00000261489 IQSEC2Q5JU85 1478 aa11.48□□□□□ -0.57
TSC22D1-201ENST00000261489 TATP17735 454 aaPredicted RBP11.48□□□□□ -0.57
TSC22D1-201ENST00000261489 KDRP35968 1356 aa11.48□□□□□ -0.57
TSC22D1-201ENST00000261489 SLC39A6Q13433 755 aa11.48□□□□□ -0.57
TSC22D1-201ENST00000261489 ZNF428Q96B54 188 aa11.48□□□□□ -0.57
TSC22D1-201ENST00000261489 ROBO1Q9Y6N7 1651 aa11.48□□□□□ -0.57
TSC22D1-201ENST00000261489 RARSP54136 660 aaKnown RBP11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 LMOD3Q0VAK6 560 aa11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 SSH1Q8WYL5 1049 aa11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 GNAI1P63096 354 aa11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 NGEFQ8N5V2 710 aa11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 MARF1Q9Y4F3 1742 aaKnown RBP11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 RTL1A6NKG5 1358 aa11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 KIF1AQ12756 1690 aa11.47□□□□□ -0.57
TSC22D1-201ENST00000261489 TEFQ10587 303 aa11.46□□□□□ -0.57
TSC22D1-201ENST00000261489 CRBNQ96SW2 442 aa11.46□□□□□ -0.57
TSC22D1-201ENST00000261489 LTN1O94822 1766 aa11.46□□□□□ -0.57
TSC22D1-201ENST00000261489 EIF2S2P20042 333 aaKnown RBP11.46□□□□□ -0.57
TSC22D1-201ENST00000261489 CYP27B1O15528 508 aa11.46□□□□□ -0.58
TSC22D1-201ENST00000261489 TWISTNBQ3B726 338 aaPredicted RBP11.46□□□□□ -0.58
TSC22D1-201ENST00000261489 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.58
TSC22D1-201ENST00000261489 COG6Q9Y2V7 657 aa11.46□□□□□ -0.58
TSC22D1-201ENST00000261489 WDR17Q8IZU2 1322 aa11.46□□□□□ -0.58
TSC22D1-201ENST00000261489 CAMTA1Q9Y6Y1 1673 aa11.45□□□□□ -0.58
TSC22D1-201ENST00000261489 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
TSC22D1-201ENST00000261489 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
TSC22D1-201ENST00000261489 KIF24Q5T7B8 1368 aa11.45□□□□□ -0.58
TSC22D1-201ENST00000261489 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 IFT57Q9NWB7 429 aa11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 ANXA1P04083 346 aa11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 SLIT3O75094 1523 aa11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 RLBP1P12271 317 aa11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 MEX3CQ5U5Q3 659 aaKnown RBP11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 NOB1Q9ULX3 412 aaKnown RBP11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 ALS2Q96Q42 1657 aa11.44□□□□□ -0.58
TSC22D1-201ENST00000261489 RGPD2P0DJD1 1756 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 RGPD5Q99666 1765 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 BTBD11A6QL63 1104 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 CHL1O00533 1208 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 VAMP4O75379 141 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 UTRNP46939 3433 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 ZNF853P0CG23 659 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 PIP4K2AP48426 406 aaPredicted RBP11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 TAF7Q15545 349 aaPredicted RBP11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 AKAP4Q5JQC9 854 aa11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 ZCRB1Q8TBF4 217 aaKnown RBP11.43□□□□□ -0.58
TSC22D1-201ENST00000261489 IL2RBP14784 551 aa11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 AMOTQ4VCS5 1084 aa11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 CPDO75976 1380 aa11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 MEGF6O75095 1541 aa11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 SKAP1Q86WV1 359 aa11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 CCDC136Q96JN2 1154 aa11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 SPG7Q9UQ90 795 aa11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 RNMTO43148 476 aaKnown RBP11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
TSC22D1-201ENST00000261489 PTCD1O75127 700 aaKnown RBP11.41□□□□□ -0.58
TSC22D1-201ENST00000261489 PHKG2P15735 406 aa11.41□□□□□ -0.58
TSC22D1-201ENST00000261489 FTSJ3Q8IY81 847 aaKnown RBP11.41□□□□□ -0.58
TSC22D1-201ENST00000261489 IFNL2Q8IZJ0 200 aa11.41□□□□□ -0.58
TSC22D1-201ENST00000261489 CARD10Q9BWT7 1032 aa11.41□□□□□ -0.58
TSC22D1-201ENST00000261489 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
TSC22D1-201ENST00000261489 COL5A2P05997 1499 aaPredicted RBP11.4□□□□□ -0.58
TSC22D1-201ENST00000261489 IL16Q14005 1332 aa11.4□□□□□ -0.58
TSC22D1-201ENST00000261489 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.59
TSC22D1-201ENST00000261489 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
TSC22D1-201ENST00000261489 RNF123Q5XPI4 1314 aa11.39□□□□□ -0.59
TSC22D1-201ENST00000261489 TRIM27P14373 513 aa11.39□□□□□ -0.59
TSC22D1-201ENST00000261489 CABP4P57796 275 aa11.39□□□□□ -0.59
TSC22D1-201ENST00000261489 F6X3S4 739 aa11.38□□□□□ -0.59
TSC22D1-201ENST00000261489 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
TSC22D1-201ENST00000261489 G2E3Q7L622 706 aa11.38□□□□□ -0.59
TSC22D1-201ENST00000261489 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
TSC22D1-201ENST00000261489 CRB1P82279 1406 aa11.38□□□□□ -0.59
TSC22D1-201ENST00000261489 EXOC5O00471 708 aa11.38□□□□□ -0.59
TSC22D1-201ENST00000261489 PPP4R2Q9NY27 417 aa11.38□□□□□ -0.59
TSC22D1-201ENST00000261489 USP21Q9UK80 565 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms