RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 CAVIN4Q5BKX8 364 aa11.97□□□□□ -0.49
VIL1-201ENST00000248444 LARP1Q6PKG0 1096 aaKnown RBP11.97□□□□□ -0.49
VIL1-201ENST00000248444 NCKAP5LQ9HCH0 1330 aa11.97□□□□□ -0.49
VIL1-201ENST00000248444 MVPQ14764 893 aaKnown RBP11.96□□□□□ -0.49
VIL1-201ENST00000248444 C14orf93Q9H972 538 aaKnown RBP11.96□□□□□ -0.49
VIL1-201ENST00000248444 KRT18P05783 430 aaKnown RBP11.96□□□□□ -0.49
VIL1-201ENST00000248444 WDR7Q9Y4E6 1490 aa11.96□□□□□ -0.49
VIL1-201ENST00000248444 GPTP24298 496 aa11.96□□□□□ -0.5
VIL1-201ENST00000248444 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.5
VIL1-201ENST00000248444 FMNL2Q96PY5 1086 aa11.96□□□□□ -0.5
VIL1-201ENST00000248444 PLCH2O75038 1416 aa11.96□□□□□ -0.5
VIL1-201ENST00000248444 SOGA3Q5TF21 947 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 IFNL2Q8IZJ0 200 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 ACSBG1Q96GR2 724 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 OLFM4Q6UX06 510 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 PEG3Q9GZU2 1588 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 NUTM1Q86Y26 1132 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 HSP90AB3PQ58FF7 597 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 CT47A1Q5JQC4 288 aaPredicted RBP11.95□□□□□ -0.5
VIL1-201ENST00000248444 IFT57Q9NWB7 429 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 UHRF1BP1LA0JNW5 1464 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 ATP10BO94823 1461 aa11.95□□□□□ -0.5
VIL1-201ENST00000248444 AIDAQ96BJ3 306 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 RFC4P35249 363 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 NAP1L1P55209 391 aaKnown RBP11.94□□□□□ -0.5
VIL1-201ENST00000248444 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
VIL1-201ENST00000248444 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
VIL1-201ENST00000248444 USP5P45974 858 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 CWC27Q6UX04 472 aaKnown RBP11.94□□□□□ -0.5
VIL1-201ENST00000248444 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 CYP46A1Q9Y6A2 500 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 CEBPZQ03701 1054 aaKnown RBP11.94□□□□□ -0.5
VIL1-201ENST00000248444 AKAP2Q9Y2D5 859 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 A2MP01023 1474 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 TXLNAP40222 546 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 IFIT5Q13325 482 aaKnown RBP11.94□□□□□ -0.5
VIL1-201ENST00000248444 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 SDF4Q9BRK5 362 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 UBAC1Q9BSL1 405 aa11.94□□□□□ -0.5
VIL1-201ENST00000248444 GPATCH8Q9UKJ3 1502 aaKnown RBP11.93□□□□□ -0.5
VIL1-201ENST00000248444 CRACR2BQ8N4Y2 399 aaPredicted RBP11.93□□□□□ -0.5
VIL1-201ENST00000248444 ZNF592Q92610 1267 aa11.93□□□□□ -0.5
VIL1-201ENST00000248444 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.5
VIL1-201ENST00000248444 SCAF11Q99590 1463 aaKnown RBP11.93□□□□□ -0.5
VIL1-201ENST00000248444 NPHP3Q7Z494 1330 aa11.93□□□□□ -0.5
VIL1-201ENST00000248444 POLR3DP05423 398 aaPredicted RBP11.93□□□□□ -0.5
VIL1-201ENST00000248444 ZNF518AQ6AHZ1 1483 aa11.92□□□□□ -0.5
VIL1-201ENST00000248444 ODF2Q5BJF6 829 aa11.92□□□□□ -0.5
VIL1-201ENST00000248444 TMEM57Q8N5G2 664 aa11.92□□□□□ -0.5
VIL1-201ENST00000248444 CCDC70Q6NSX1 233 aa11.92□□□□□ -0.5
VIL1-201ENST00000248444 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
VIL1-201ENST00000248444 TTC21BQ7Z4L5 1316 aa11.92□□□□□ -0.5
VIL1-201ENST00000248444 RIMS2Q9UQ26 1411 aa11.92□□□□□ -0.5
VIL1-201ENST00000248444 CHD1LQ86WJ1 897 aa11.92□□□□□ -0.5
VIL1-201ENST00000248444 EXOC6BQ9Y2D4 811 aa11.92□□□□□ -0.5
VIL1-201ENST00000248444 SYCP2Q9BX26 1530 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 C6orf229H3BNL8 230 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 HYPKQ9NX55 129 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 ANKRD18BA2A2Z9 1011 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 ZHX3Q9H4I2 956 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 CTNNA3Q9UI47 895 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 F6X3S4 739 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 ZFYVE27Q5T4F4 411 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
VIL1-201ENST00000248444 TEX13AQ9BXU3 409 aaPredicted RBP11.91□□□□□ -0.5
VIL1-201ENST00000248444 LMTK3Q96Q04 1460 aa11.9□□□□□ -0.5
VIL1-201ENST00000248444 SLC5A1P13866 664 aa11.9□□□□□ -0.5
VIL1-201ENST00000248444 ZNF396Q96N95 335 aaPredicted RBP11.9□□□□□ -0.5
VIL1-201ENST00000248444 OFD1O75665 1012 aa11.9□□□□□ -0.5
VIL1-201ENST00000248444 STK38Q15208 465 aa11.9□□□□□ -0.5
VIL1-201ENST00000248444 FBLN1P23142 703 aa11.9□□□□□ -0.5
VIL1-201ENST00000248444 ZNF76P36508 570 aa11.9□□□□□ -0.5
VIL1-201ENST00000248444 ANKRD1Q15327 319 aa11.9□□□□□ -0.5
VIL1-201ENST00000248444 RPAP2Q8IXW5 612 aaPredicted RBP11.9□□□□□ -0.5
VIL1-201ENST00000248444 SLFN5Q08AF3 891 aa11.9□□□□□ -0.51
VIL1-201ENST00000248444 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.51
VIL1-201ENST00000248444 A0A087WZG4 1122 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 DNAAF4Q8WXU2 420 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 DBF4Q9UBU7 674 aaPredicted RBP11.89□□□□□ -0.51
VIL1-201ENST00000248444 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 ST5P78524 1137 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 IBSPP21815 317 aaPredicted RBP11.89□□□□□ -0.51
VIL1-201ENST00000248444 RABEP1Q15276 862 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 PDILTQ8N807 584 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 NAT10Q9H0A0 1025 aaKnown RBP11.89□□□□□ -0.51
VIL1-201ENST00000248444 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.51
VIL1-201ENST00000248444 DUOX2Q9NRD8 1548 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 PDCP20941 246 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 MCM2P49736 904 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 MAP3K2Q9Y2U5 619 aa11.89□□□□□ -0.51
VIL1-201ENST00000248444 IMMTQ16891 758 aaKnown RBP11.88□□□□□ -0.51
VIL1-201ENST00000248444 DDX46Q7L014 1031 aaKnown RBP11.88□□□□□ -0.51
VIL1-201ENST00000248444 MKNK2Q9HBH9 465 aa11.88□□□□□ -0.51
VIL1-201ENST00000248444 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms