RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 DLG5Q8TDM6 1919 aa25.14■■□□□ 1.61
SBDS-201ENST00000246868 WDR63Q8IWG1 891 aa25.12■■□□□ 1.61
SBDS-201ENST00000246868 TRIM35Q9UPQ4 493 aa25.12■■□□□ 1.61
SBDS-201ENST00000246868 UNC5CLQ8IV45 518 aa25.12■■□□□ 1.61
SBDS-201ENST00000246868 FNBP4Q8N3X1 1017 aaPredicted RBP25.11■■□□□ 1.61
SBDS-201ENST00000246868 USP35Q9P2H5 1018 aa25.11■■□□□ 1.61
SBDS-201ENST00000246868 IL2RBP14784 551 aa25.1■■□□□ 1.61
SBDS-201ENST00000246868 CALD1Q05682 793 aaKnown RBP25.1■■□□□ 1.61
SBDS-201ENST00000246868 RTF1Q92541 710 aaKnown RBP25.1■■□□□ 1.61
SBDS-201ENST00000246868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.1■■□□□ 1.61
SBDS-201ENST00000246868 SPG7Q9UQ90 795 aa25.1■■□□□ 1.61
SBDS-201ENST00000246868 PARP4Q9UKK3 1724 aaKnown RBP25.1■■□□□ 1.61
SBDS-201ENST00000246868 MEGF6O75095 1541 aa25.1■■□□□ 1.61
SBDS-201ENST00000246868 ZNF530Q6P9A1 599 aaPredicted RBP25.08■■□□□ 1.61
SBDS-201ENST00000246868 GNAT3A8MTJ3 354 aa25.08■■□□□ 1.6
SBDS-201ENST00000246868 HTATSF1O43719 755 aaKnown RBP25.08■■□□□ 1.6
SBDS-201ENST00000246868 C1orf141Q5JVX7 400 aa25.08■■□□□ 1.6
SBDS-201ENST00000246868 CCDC9Q9Y3X0 531 aaKnown RBP25.08■■□□□ 1.6
SBDS-201ENST00000246868 MAP3K5Q99683 1374 aa25.07■■□□□ 1.6
SBDS-201ENST00000246868 OVOS2A0A0G2JMS6 1433 aa25.07■■□□□ 1.6
SBDS-201ENST00000246868 E9PSI1 815 aa25.07■■□□□ 1.6
SBDS-201ENST00000246868 CDCA7LQ96GN5 454 aa25.06■■□□□ 1.6
SBDS-201ENST00000246868 USP21Q9UK80 565 aa25.06■■□□□ 1.6
SBDS-201ENST00000246868 THRAP3Q9Y2W1 955 aaKnown RBP25.06■■□□□ 1.6
SBDS-201ENST00000246868 BCL9LQ86UU0 1499 aa25.05■■□□□ 1.6
SBDS-201ENST00000246868 AKAP4Q5JQC9 854 aa25.05■■□□□ 1.6
SBDS-201ENST00000246868 IL16Q14005 1332 aa25.05■■□□□ 1.6
SBDS-201ENST00000246868 SPATA31A1Q5TZJ5 1347 aa25.05■■□□□ 1.6
SBDS-201ENST00000246868 SPATA31A5Q5VU36 1347 aa25.04■■□□□ 1.6
SBDS-201ENST00000246868 SPATA31A7Q8IWB4 1347 aa25.04■■□□□ 1.6
SBDS-201ENST00000246868 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.04■■□□□ 1.6
SBDS-201ENST00000246868 VPS72Q15906 364 aa25.04■■□□□ 1.6
SBDS-201ENST00000246868 PKD1L3Q7Z443 1732 aa25.04■■□□□ 1.6
SBDS-201ENST00000246868 SLFN5Q08AF3 891 aa25.03■■□□□ 1.6
SBDS-201ENST00000246868 ZCRB1Q8TBF4 217 aaKnown RBP25.03■■□□□ 1.6
SBDS-201ENST00000246868 CDCA7Q9BWT1 371 aaPredicted RBP25.03■■□□□ 1.6
SBDS-201ENST00000246868 MYH16Q9H6N6 1097 aa25.02■■□□□ 1.6
SBDS-201ENST00000246868 AFF2P51816 1311 aa25.02■■□□□ 1.6
SBDS-201ENST00000246868 MCM10Q7L590 875 aa25.01■■□□□ 1.59
SBDS-201ENST00000246868 DCTN1Q14203 1278 aa25.01■■□□□ 1.59
SBDS-201ENST00000246868 THUMPD2Q9BTF0 503 aaKnown RBP25.01■■□□□ 1.59
SBDS-201ENST00000246868 PCDH11XQ9BZA7 1347 aa25■■□□□ 1.59
SBDS-201ENST00000246868 PCDH11YQ9BZA8 1340 aa25■■□□□ 1.59
SBDS-201ENST00000246868 IFNL2Q8IZJ0 200 aa25■■□□□ 1.59
SBDS-201ENST00000246868 DISP2A7MBM2 1401 aa24.99■■□□□ 1.59
SBDS-201ENST00000246868 WNK3Q9BYP7 1800 aa24.99■■□□□ 1.59
SBDS-201ENST00000246868 SPINK5Q9NQ38 1064 aaPredicted RBP24.98■■□□□ 1.59
SBDS-201ENST00000246868 HSP90AB1P08238 724 aaKnown RBP24.97■■□□□ 1.59
SBDS-201ENST00000246868 PHKG2P15735 406 aa24.97■■□□□ 1.59
SBDS-201ENST00000246868 GNAI1P63096 354 aa24.97■■□□□ 1.59
SBDS-201ENST00000246868 DUSP27Q5VZP5 1158 aa24.97■■□□□ 1.59
SBDS-201ENST00000246868 BARGINQ6ZT62 677 aa24.97■■□□□ 1.59
SBDS-201ENST00000246868 IFT57Q9NWB7 429 aa24.97■■□□□ 1.59
SBDS-201ENST00000246868 TRMT2AQ8IZ69 625 aaKnown RBP24.97■■□□□ 1.59
SBDS-201ENST00000246868 LAS1LQ9Y4W2 734 aaKnown RBP24.97■■□□□ 1.59
SBDS-201ENST00000246868 IL17REQ8NFR9 667 aa24.95■■□□□ 1.58
SBDS-201ENST00000246868 CFAP44Q96MT7 982 aa24.95■■□□□ 1.58
SBDS-201ENST00000246868 TRPC5Q9UL62 973 aaPredicted RBP24.95■■□□□ 1.58
SBDS-201ENST00000246868 EXOC5O00471 708 aa24.94■■□□□ 1.58
SBDS-201ENST00000246868 CYP27B1O15528 508 aa24.94■■□□□ 1.58
SBDS-201ENST00000246868 MPRIPQ6WCQ1 1025 aa24.94■■□□□ 1.58
SBDS-201ENST00000246868 CEMIPQ8WUJ3 1361 aa24.93■■□□□ 1.58
SBDS-201ENST00000246868 RNMTO43148 476 aaKnown RBP24.93■■□□□ 1.58
SBDS-201ENST00000246868 DDX54Q8TDD1 881 aaKnown RBP24.93■■□□□ 1.58
SBDS-201ENST00000246868 LRRC37A3O60309 1634 aa24.93■■□□□ 1.58
SBDS-201ENST00000246868 TEFQ10587 303 aa24.92■■□□□ 1.58
SBDS-201ENST00000246868 DCAF5Q96JK2 942 aa24.92■■□□□ 1.58
SBDS-201ENST00000246868 FANCIQ9NVI1 1328 aa24.92■■□□□ 1.58
SBDS-201ENST00000246868 VIRMAQ69YN4 1812 aaKnown RBP24.91■■□□□ 1.58
SBDS-201ENST00000246868 ZNF853P0CG23 659 aa24.91■■□□□ 1.58
SBDS-201ENST00000246868 LGR6Q9HBX8 967 aa24.91■■□□□ 1.58
SBDS-201ENST00000246868 ATRNO75882 1429 aa24.91■■□□□ 1.58
SBDS-201ENST00000246868 TNS2Q63HR2 1409 aa24.91■■□□□ 1.58
SBDS-201ENST00000246868 DDB1Q16531 1140 aa24.9■■□□□ 1.58
SBDS-201ENST00000246868 FAM98CQ17RN3 349 aaKnown RBP24.9■■□□□ 1.58
SBDS-201ENST00000246868 SHANK3Q9BYB0 1731 aa24.9■■□□□ 1.58
SBDS-201ENST00000246868 TSR2Q969E8 191 aaKnown RBP24.9■■□□□ 1.58
SBDS-201ENST00000246868 GJD4Q96KN9 370 aaPredicted RBP24.9■■□□□ 1.58
SBDS-201ENST00000246868 SCN11AQ9UI33 1791 aa24.89■■□□□ 1.57
SBDS-201ENST00000246868 TAF7Q15545 349 aaPredicted RBP24.89■■□□□ 1.57
SBDS-201ENST00000246868 ADAMTS7Q9UKP4 1686 aa24.89■■□□□ 1.57
SBDS-201ENST00000246868 CHL1O00533 1208 aa24.88■■□□□ 1.57
SBDS-201ENST00000246868 ZNF772Q68DY9 489 aaPredicted RBP24.88■■□□□ 1.57
SBDS-201ENST00000246868 QTRT2Q9H974 415 aaKnown RBP24.88■■□□□ 1.57
SBDS-201ENST00000246868 BABAM1Q9NWV8 329 aa24.88■■□□□ 1.57
SBDS-201ENST00000246868 NKX1-1Q15270 411 aaPredicted RBP24.87■■□□□ 1.57
SBDS-201ENST00000246868 MBIPQ9NS73 344 aa24.87■■□□□ 1.57
SBDS-201ENST00000246868 KDM6AO15550 1401 aaPredicted RBP24.87■■□□□ 1.57
SBDS-201ENST00000246868 A0A0G2JS52 829 aa24.86■■□□□ 1.57
SBDS-201ENST00000246868 MYT1Q01538 1121 aa24.86■■□□□ 1.57
SBDS-201ENST00000246868 TSPYL4Q9UJ04 414 aa24.86■■□□□ 1.57
SBDS-201ENST00000246868 GLI3P10071 1580 aa24.84■■□□□ 1.57
SBDS-201ENST00000246868 SLC52A2Q9HAB3 445 aa24.83■■□□□ 1.57
SBDS-201ENST00000246868 RCAN3Q9UKA8 241 aa24.83■■□□□ 1.57
SBDS-201ENST00000246868 CT47B1P0C2W7 299 aaPredicted RBP24.83■■□□□ 1.56
SBDS-201ENST00000246868 EXOSC9Q06265 439 aaKnown RBP24.83■■□□□ 1.56
SBDS-201ENST00000246868 ERVV-2B6SEH9 535 aa24.82■■□□□ 1.56
SBDS-201ENST00000246868 CABP4P57796 275 aa24.82■■□□□ 1.56
SBDS-201ENST00000246868 MIS18AQ9NYP9 233 aa24.82■■□□□ 1.56
SBDS-201ENST00000246868 BTBD11A6QL63 1104 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms