RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SMC1AQ14683 1233 aaKnown RBP15.49■□□□□ 0.07
NEK9-201ENST00000238616 FERMT2Q96AC1 680 aa15.49■□□□□ 0.07
NEK9-201ENST00000238616 ARHGAP5Q13017 1502 aa15.49■□□□□ 0.07
NEK9-201ENST00000238616 IDH1O75874 414 aaKnown RBP15.49■□□□□ 0.07
NEK9-201ENST00000238616 CWC27Q6UX04 472 aaKnown RBP15.49■□□□□ 0.07
NEK9-201ENST00000238616 CCDC192P0DO97 292 aa15.48■□□□□ 0.07
NEK9-201ENST00000238616 CTNNA2P26232 953 aa15.48■□□□□ 0.07
NEK9-201ENST00000238616 ZNF354CQ86Y25 554 aa15.48■□□□□ 0.07
NEK9-201ENST00000238616 POLR3DP05423 398 aaPredicted RBP15.48■□□□□ 0.07
NEK9-201ENST00000238616 BTBD11A6QL63 1104 aa15.48■□□□□ 0.07
NEK9-201ENST00000238616 TRAK2O60296 914 aa15.47■□□□□ 0.07
NEK9-201ENST00000238616 HDGFL1Q5TGJ6 251 aa15.47■□□□□ 0.07
NEK9-201ENST00000238616 ZBED9Q6R2W3 1325 aa15.47■□□□□ 0.07
NEK9-201ENST00000238616 ARL1P40616 181 aaPredicted RBP15.47■□□□□ 0.07
NEK9-201ENST00000238616 AACSQ86V21 672 aa15.47■□□□□ 0.07
NEK9-201ENST00000238616 MKNK2Q9HBH9 465 aa15.47■□□□□ 0.07
NEK9-201ENST00000238616 EIF3JO75822 258 aaKnown RBP15.47■□□□□ 0.07
NEK9-201ENST00000238616 KLHL10Q6JEL2 608 aa15.47■□□□□ 0.07
NEK9-201ENST00000238616 EPB41L2O43491 1005 aaKnown RBP15.47■□□□□ 0.07
NEK9-201ENST00000238616 VTI1AQ96AJ9 217 aa15.47■□□□□ 0.07
NEK9-201ENST00000238616 NOB1Q9ULX3 412 aaKnown RBP15.47■□□□□ 0.07
NEK9-201ENST00000238616 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
NEK9-201ENST00000238616 ANKRD1Q15327 319 aa15.46■□□□□ 0.07
NEK9-201ENST00000238616 LARP1BQ659C4 914 aaKnown RBP15.46■□□□□ 0.07
NEK9-201ENST00000238616 GAS2L2Q8NHY3 880 aa15.46■□□□□ 0.07
NEK9-201ENST00000238616 TAF4BQ92750 862 aa15.46■□□□□ 0.07
NEK9-201ENST00000238616 CETN2P41208 172 aa15.46■□□□□ 0.07
NEK9-201ENST00000238616 MAP3K9P80192 1104 aa15.46■□□□□ 0.07
NEK9-201ENST00000238616 GNAI3P08754 354 aa15.46■□□□□ 0.07
NEK9-201ENST00000238616 ZSCAN25Q6NSZ9 544 aa15.46■□□□□ 0.07
NEK9-201ENST00000238616 GIMAP7Q8NHV1 300 aa15.46■□□□□ 0.07
NEK9-201ENST00000238616 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.46■□□□□ 0.07
NEK9-201ENST00000238616 PABPN1LA6NDY0 278 aaKnown RBP15.46■□□□□ 0.06
NEK9-201ENST00000238616 IGHMBP2P38935 993 aaKnown RBP15.46■□□□□ 0.06
NEK9-201ENST00000238616 PPM1EQ8WY54 764 aa15.45■□□□□ 0.06
NEK9-201ENST00000238616 TMCO5BA8MYB1 307 aa15.45■□□□□ 0.06
NEK9-201ENST00000238616 CNTLNQ9NXG0 1405 aa15.45■□□□□ 0.06
NEK9-201ENST00000238616 CCDC96Q2M329 555 aa15.45■□□□□ 0.06
NEK9-201ENST00000238616 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
NEK9-201ENST00000238616 PUF60Q9UHX1 559 aaKnown RBP15.45■□□□□ 0.06
NEK9-201ENST00000238616 RAD54L2Q9Y4B4 1467 aa15.45■□□□□ 0.06
NEK9-201ENST00000238616 HOOK3Q86VS8 718 aa15.45■□□□□ 0.06
NEK9-201ENST00000238616 CDKL5O76039 1030 aa15.44■□□□□ 0.06
NEK9-201ENST00000238616 TMX1Q9H3N1 280 aa15.44■□□□□ 0.06
NEK9-201ENST00000238616 LARP1Q6PKG0 1096 aaKnown RBP15.44■□□□□ 0.06
NEK9-201ENST00000238616 CACNA2D4Q7Z3S7 1137 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 CAMK4Q16566 473 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 CCDC82Q8N4S0 544 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 DDX11Q96FC9 970 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 IFFO1Q0D2I5 559 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 SSX2IPQ9Y2D8 614 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 SAMM50Q9Y512 469 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 MYO10Q9HD67 2058 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 LMAN1P49257 510 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 AIDAQ96BJ3 306 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 SPG7Q9UQ90 795 aa15.43■□□□□ 0.06
NEK9-201ENST00000238616 CBFA2T2O43439 604 aa15.42■□□□□ 0.06
NEK9-201ENST00000238616 DZIP1Q86YF9 867 aaKnown RBP15.42■□□□□ 0.06
NEK9-201ENST00000238616 SPATA32Q96LK8 384 aa15.42■□□□□ 0.06
NEK9-201ENST00000238616 CCDC148Q8NFR7 591 aa15.42■□□□□ 0.06
NEK9-201ENST00000238616 BCAR3O75815 825 aa15.42■□□□□ 0.06
NEK9-201ENST00000238616 USP8P40818 1118 aa15.42■□□□□ 0.06
NEK9-201ENST00000238616 TXNDC2Q86VQ3 553 aa15.42■□□□□ 0.06
NEK9-201ENST00000238616 ERLIN1O75477 346 aa15.42■□□□□ 0.06
NEK9-201ENST00000238616 SPTY2D1Q68D10 685 aaPredicted RBP15.42■□□□□ 0.06
NEK9-201ENST00000238616 CFAP100Q494V2 611 aa15.41■□□□□ 0.06
NEK9-201ENST00000238616 ZMYND15Q9H091 742 aa15.41■□□□□ 0.06
NEK9-201ENST00000238616 PRKAR2BP31323 418 aa15.41■□□□□ 0.06
NEK9-201ENST00000238616 KRT85P78386 507 aa15.41■□□□□ 0.06
NEK9-201ENST00000238616 TMCO3Q6UWJ1 677 aa15.41■□□□□ 0.06
NEK9-201ENST00000238616 RGS22Q8NE09 1264 aa15.41■□□□□ 0.06
NEK9-201ENST00000238616 METTL24Q5JXM2 366 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
NEK9-201ENST00000238616 ZWINTO95229 277 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 SPA17Q15506 151 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
NEK9-201ENST00000238616 SULT6B1Q6IMI4 303 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 CASTP20810 708 aaKnown RBP15.4■□□□□ 0.06
NEK9-201ENST00000238616 MCM2P49736 904 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 ZNF287Q9HBT7 754 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 MBD3O95983 291 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 FILIP1Q7Z7B0 1213 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 CUL5Q93034 780 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 ARHGAP29Q52LW3 1261 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 MMRN2Q9H8L6 949 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 GIGYF2Q6Y7W6 1299 aaKnown RBP15.4■□□□□ 0.06
NEK9-201ENST00000238616 FEZ1Q99689 392 aa15.4■□□□□ 0.06
NEK9-201ENST00000238616 PTCD1O75127 700 aaKnown RBP15.39■□□□□ 0.05
NEK9-201ENST00000238616 ADAMTS2O95450 1211 aa15.39■□□□□ 0.05
NEK9-201ENST00000238616 MRE11P49959 708 aa15.39■□□□□ 0.05
NEK9-201ENST00000238616 JAKMIP1Q96N16 626 aaKnown RBP15.39■□□□□ 0.05
NEK9-201ENST00000238616 ZNF530Q6P9A1 599 aaPredicted RBP15.39■□□□□ 0.05
NEK9-201ENST00000238616 TSG101Q99816 390 aa15.39■□□□□ 0.05
NEK9-201ENST00000238616 PRPF4BQ13523 1007 aaKnown RBP15.39■□□□□ 0.05
NEK9-201ENST00000238616 MTERF4Q7Z6M4 381 aaKnown RBP15.39■□□□□ 0.05
NEK9-201ENST00000238616 CEP131Q9UPN4 1083 aa15.39■□□□□ 0.05
NEK9-201ENST00000238616 CASQ1P31415 396 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms