RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
SEC61B-201ENST00000223641 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
SEC61B-201ENST00000223641 IL2RBP14784 551 aa18.54■□□□□ 0.56
SEC61B-201ENST00000223641 MTHFSDQ2M296 383 aaKnown RBP18.54■□□□□ 0.56
SEC61B-201ENST00000223641 AMOTQ4VCS5 1084 aa18.54■□□□□ 0.56
SEC61B-201ENST00000223641 BARGINQ6ZT62 677 aa18.54■□□□□ 0.56
SEC61B-201ENST00000223641 ILDR1Q86SU0 546 aaPredicted RBP18.54■□□□□ 0.56
SEC61B-201ENST00000223641 GLI3P10071 1580 aa18.53■□□□□ 0.56
SEC61B-201ENST00000223641 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
SEC61B-201ENST00000223641 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
SEC61B-201ENST00000223641 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
SEC61B-201ENST00000223641 TRPC5Q9UL62 973 aaPredicted RBP18.53■□□□□ 0.56
SEC61B-201ENST00000223641 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.56
SEC61B-201ENST00000223641 CDCA7Q9BWT1 371 aaPredicted RBP18.52■□□□□ 0.56
SEC61B-201ENST00000223641 USP35Q9P2H5 1018 aa18.52■□□□□ 0.56
SEC61B-201ENST00000223641 ZBED9Q6R2W3 1325 aa18.51■□□□□ 0.55
SEC61B-201ENST00000223641 GJD4Q96KN9 370 aaPredicted RBP18.51■□□□□ 0.55
SEC61B-201ENST00000223641 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
SEC61B-201ENST00000223641 RIPK4P57078 832 aa18.5■□□□□ 0.55
SEC61B-201ENST00000223641 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
SEC61B-201ENST00000223641 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
SEC61B-201ENST00000223641 ONECUT3O60422 494 aaPredicted RBP18.49■□□□□ 0.55
SEC61B-201ENST00000223641 ZNF772Q68DY9 489 aaPredicted RBP18.49■□□□□ 0.55
SEC61B-201ENST00000223641 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
SEC61B-201ENST00000223641 QTRT2Q9H974 415 aaKnown RBP18.49■□□□□ 0.55
SEC61B-201ENST00000223641 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
SEC61B-201ENST00000223641 THSD7AQ9UPZ6 1657 aa18.49■□□□□ 0.55
SEC61B-201ENST00000223641 ADAMTS7Q9UKP4 1686 aa18.48■□□□□ 0.55
SEC61B-201ENST00000223641 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
SEC61B-201ENST00000223641 HTATSF1O43719 755 aaKnown RBP18.48■□□□□ 0.55
SEC61B-201ENST00000223641 WWC1Q8IX03 1113 aa18.48■□□□□ 0.55
SEC61B-201ENST00000223641 ZCRB1Q8TBF4 217 aaKnown RBP18.48■□□□□ 0.55
SEC61B-201ENST00000223641 CCDC9Q9Y3X0 531 aaKnown RBP18.48■□□□□ 0.55
SEC61B-201ENST00000223641 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
SEC61B-201ENST00000223641 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
SEC61B-201ENST00000223641 LRRC37A3O60309 1634 aa18.47■□□□□ 0.55
SEC61B-201ENST00000223641 VIRMAQ69YN4 1812 aaKnown RBP18.46■□□□□ 0.55
SEC61B-201ENST00000223641 MAP3K5Q99683 1374 aa18.46■□□□□ 0.55
SEC61B-201ENST00000223641 CYP27B1O15528 508 aa18.46■□□□□ 0.55
SEC61B-201ENST00000223641 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
SEC61B-201ENST00000223641 RGS17Q9UGC6 210 aaPredicted RBP18.46■□□□□ 0.55
SEC61B-201ENST00000223641 TNS2Q63HR2 1409 aa18.46■□□□□ 0.55
SEC61B-201ENST00000223641 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
SEC61B-201ENST00000223641 PHKG2P15735 406 aa18.45■□□□□ 0.54
SEC61B-201ENST00000223641 LMOD3Q0VAK6 560 aa18.45■□□□□ 0.54
SEC61B-201ENST00000223641 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
SEC61B-201ENST00000223641 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
SEC61B-201ENST00000223641 PCDH11XQ9BZA7 1347 aa18.45■□□□□ 0.54
SEC61B-201ENST00000223641 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
SEC61B-201ENST00000223641 EXOC5O00471 708 aa18.44■□□□□ 0.54
SEC61B-201ENST00000223641 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
SEC61B-201ENST00000223641 WDR63Q8IWG1 891 aa18.44■□□□□ 0.54
SEC61B-201ENST00000223641 SCN11AQ9UI33 1791 aa18.43■□□□□ 0.54
SEC61B-201ENST00000223641 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
SEC61B-201ENST00000223641 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
SEC61B-201ENST00000223641 DDB1Q16531 1140 aa18.42■□□□□ 0.54
SEC61B-201ENST00000223641 C1orf141Q5JVX7 400 aa18.42■□□□□ 0.54
SEC61B-201ENST00000223641 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
SEC61B-201ENST00000223641 RBM6P78332 1123 aaKnown RBP18.41■□□□□ 0.54
SEC61B-201ENST00000223641 PDE3BQ13370 1112 aa18.41■□□□□ 0.54
SEC61B-201ENST00000223641 RTF1Q92541 710 aaKnown RBP18.41■□□□□ 0.54
SEC61B-201ENST00000223641 IL16Q14005 1332 aa18.41■□□□□ 0.54
SEC61B-201ENST00000223641 HSP90AB1P08238 724 aaKnown RBP18.4■□□□□ 0.54
SEC61B-201ENST00000223641 DCTN1Q14203 1278 aa18.4■□□□□ 0.54
SEC61B-201ENST00000223641 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
SEC61B-201ENST00000223641 MCM10Q7L590 875 aa18.39■□□□□ 0.53
SEC61B-201ENST00000223641 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
SEC61B-201ENST00000223641 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
SEC61B-201ENST00000223641 SIPA1L3O60292 1781 aaPredicted RBP18.39■□□□□ 0.53
SEC61B-201ENST00000223641 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
SEC61B-201ENST00000223641 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
SEC61B-201ENST00000223641 MPRIPQ6WCQ1 1025 aa18.38■□□□□ 0.53
SEC61B-201ENST00000223641 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
SEC61B-201ENST00000223641 DDX54Q8TDD1 881 aaKnown RBP18.38■□□□□ 0.53
SEC61B-201ENST00000223641 THUMPD2Q9BTF0 503 aaKnown RBP18.38■□□□□ 0.53
SEC61B-201ENST00000223641 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
SEC61B-201ENST00000223641 CALD1Q05682 793 aaKnown RBP18.37■□□□□ 0.53
SEC61B-201ENST00000223641 POTEAQ6S8J7 498 aa18.37■□□□□ 0.53
SEC61B-201ENST00000223641 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
SEC61B-201ENST00000223641 MRC1P22897 1456 aa18.37■□□□□ 0.53
SEC61B-201ENST00000223641 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
SEC61B-201ENST00000223641 SLFN5Q08AF3 891 aa18.36■□□□□ 0.53
SEC61B-201ENST00000223641 SEPT12Q8IYM1 358 aa18.36■□□□□ 0.53
SEC61B-201ENST00000223641 MARCH10Q8NA82 808 aaPredicted RBP18.36■□□□□ 0.53
SEC61B-201ENST00000223641 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
SEC61B-201ENST00000223641 CDCA7LQ96GN5 454 aa18.35■□□□□ 0.53
SEC61B-201ENST00000223641 BCL9O00512 1426 aa18.34■□□□□ 0.53
SEC61B-201ENST00000223641 E9PSI1 815 aa18.34■□□□□ 0.53
SEC61B-201ENST00000223641 RXRBP28702 533 aa18.34■□□□□ 0.53
SEC61B-201ENST00000223641 CFAP44Q96MT7 982 aa18.34■□□□□ 0.53
SEC61B-201ENST00000223641 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
SEC61B-201ENST00000223641 ERVV-2B6SEH9 535 aa18.33■□□□□ 0.52
SEC61B-201ENST00000223641 CHL1O00533 1208 aa18.33■□□□□ 0.52
SEC61B-201ENST00000223641 BABAM1Q9NWV8 329 aa18.33■□□□□ 0.52
SEC61B-201ENST00000223641 ITGB4P16144 1822 aa18.33■□□□□ 0.52
SEC61B-201ENST00000223641 GNAI1P63096 354 aa18.32■□□□□ 0.52
SEC61B-201ENST00000223641 TAF7Q15545 349 aaPredicted RBP18.32■□□□□ 0.52
SEC61B-201ENST00000223641 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
SEC61B-201ENST00000223641 SLC52A2Q9HAB3 445 aa18.32■□□□□ 0.52
SEC61B-201ENST00000223641 TEFQ10587 303 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms