RNA–Protein interactions for RNA: ENST00000034275.12

RANBP3-201, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-201ENST00000034275 CDCA7LQ96GN5 454 aa22.04■■□□□ 1.12
RANBP3-201ENST00000034275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.04■■□□□ 1.122e-6■□□□□ 10
RANBP3-201ENST00000034275 LRP6O75581 1613 aa22.03■■□□□ 1.12
RANBP3-201ENST00000034275 UNC5CLQ8IV45 518 aa22.03■■□□□ 1.12
RANBP3-201ENST00000034275 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
RANBP3-201ENST00000034275 SPG7Q9UQ90 795 aa22.03■■□□□ 1.12
RANBP3-201ENST00000034275 GNAT3A8MTJ3 354 aa22.02■■□□□ 1.12
RANBP3-201ENST00000034275 IL2RBP14784 551 aa22.02■■□□□ 1.12
RANBP3-201ENST00000034275 CALD1Q05682 793 aaKnown RBP22.02■■□□□ 1.12
RANBP3-201ENST00000034275 NWD2Q9ULI1 1742 aa22.02■■□□□ 1.12
RANBP3-201ENST00000034275 PLEKHG2Q9H7P9 1386 aa22.02■■□□□ 1.12
RANBP3-201ENST00000034275 HTATSF1O43719 755 aaKnown RBP22.02■■□□□ 1.11
RANBP3-201ENST00000034275 E9PSI1 815 aa22.01■■□□□ 1.11
RANBP3-201ENST00000034275 DLG5Q8TDM6 1919 aa22■■□□□ 1.11
RANBP3-201ENST00000034275 C1orf141Q5JVX7 400 aa22■■□□□ 1.11
RANBP3-201ENST00000034275 ZNF530Q6P9A1 599 aaPredicted RBP22■■□□□ 1.11
RANBP3-201ENST00000034275 SLFN5Q08AF3 891 aa21.99■■□□□ 1.11
RANBP3-201ENST00000034275 USP21Q9UK80 565 aa21.99■■□□□ 1.11
RANBP3-201ENST00000034275 CCDC9Q9Y3X0 531 aaKnown RBP21.99■■□□□ 1.11
RANBP3-201ENST00000034275 AKAP4Q5JQC9 854 aa21.99■■□□□ 1.11
RANBP3-201ENST00000034275 MEGF6O75095 1541 aa21.98■■□□□ 1.11
RANBP3-201ENST00000034275 IL16Q14005 1332 aa21.98■■□□□ 1.11
RANBP3-201ENST00000034275 THRAP3Q9Y2W1 955 aaKnown RBP21.98■■□□□ 1.11
RANBP3-201ENST00000034275 MAP3K5Q99683 1374 aa21.97■■□□□ 1.11
RANBP3-201ENST00000034275 SPATA31A1Q5TZJ5 1347 aa21.97■■□□□ 1.11
RANBP3-201ENST00000034275 DCTN1Q14203 1278 aa21.97■■□□□ 1.11
RANBP3-201ENST00000034275 ZCRB1Q8TBF4 217 aaKnown RBP21.97■■□□□ 1.11
RANBP3-201ENST00000034275 NRAPQ86VF7 1730 aa21.97■■□□□ 1.11
RANBP3-201ENST00000034275 BCL9LQ86UU0 1499 aa21.97■■□□□ 1.11
RANBP3-201ENST00000034275 MCM10Q7L590 875 aa21.97■■□□□ 1.11
RANBP3-201ENST00000034275 SPINK5Q9NQ38 1064 aaPredicted RBP21.97■■□□□ 1.11
RANBP3-201ENST00000034275 SPATA31A5Q5VU36 1347 aa21.96■■□□□ 1.11
RANBP3-201ENST00000034275 SPATA31A7Q8IWB4 1347 aa21.96■■□□□ 1.11
RANBP3-201ENST00000034275 VPS72Q15906 364 aa21.96■■□□□ 1.11
RANBP3-201ENST00000034275 THUMPD2Q9BTF0 503 aaKnown RBP21.96■■□□□ 1.11
RANBP3-201ENST00000034275 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
RANBP3-201ENST00000034275 TRMT2AQ8IZ69 625 aaKnown RBP21.95■■□□□ 1.1
RANBP3-201ENST00000034275 CDCA7Q9BWT1 371 aaPredicted RBP21.95■■□□□ 1.1
RANBP3-201ENST00000034275 OVOS2A0A0G2JMS6 1433 aa21.95■■□□□ 1.1
RANBP3-201ENST00000034275 DUSP27Q5VZP5 1158 aa21.94■■□□□ 1.1
RANBP3-201ENST00000034275 IFNL2Q8IZJ0 200 aa21.94■■□□□ 1.1
RANBP3-201ENST00000034275 PARP4Q9UKK3 1724 aaKnown RBP21.93■■□□□ 1.1
RANBP3-201ENST00000034275 AFF2P51816 1311 aa21.93■■□□□ 1.1
RANBP3-201ENST00000034275 LAS1LQ9Y4W2 734 aaKnown RBP21.93■■□□□ 1.1
RANBP3-201ENST00000034275 GNAI1P63096 354 aa21.92■■□□□ 1.1
RANBP3-201ENST00000034275 IL17REQ8NFR9 667 aa21.92■■□□□ 1.1
RANBP3-201ENST00000034275 PHKG2P15735 406 aa21.92■■□□□ 1.1
RANBP3-201ENST00000034275 MPRIPQ6WCQ1 1025 aa21.92■■□□□ 1.1
RANBP3-201ENST00000034275 CFAP44Q96MT7 982 aa21.92■■□□□ 1.1
RANBP3-201ENST00000034275 IFT57Q9NWB7 429 aa21.92■■□□□ 1.1
RANBP3-201ENST00000034275 PCDH11XQ9BZA7 1347 aa21.91■■□□□ 1.1
RANBP3-201ENST00000034275 PCDH11YQ9BZA8 1340 aa21.91■■□□□ 1.1
RANBP3-201ENST00000034275 EXOC5O00471 708 aa21.91■■□□□ 1.1
RANBP3-201ENST00000034275 HSP90AB1P08238 724 aaKnown RBP21.91■■□□□ 1.1
RANBP3-201ENST00000034275 BARGINQ6ZT62 677 aa21.91■■□□□ 1.1
RANBP3-201ENST00000034275 CYP27B1O15528 508 aa21.9■■□□□ 1.1
RANBP3-201ENST00000034275 LGR6Q9HBX8 967 aa21.9■■□□□ 1.1
RANBP3-201ENST00000034275 DDX54Q8TDD1 881 aaKnown RBP21.89■■□□□ 1.1
RANBP3-201ENST00000034275 PKD1L3Q7Z443 1732 aa21.89■■□□□ 1.09
RANBP3-201ENST00000034275 DISP2A7MBM2 1401 aa21.88■■□□□ 1.09
RANBP3-201ENST00000034275 RNMTO43148 476 aaKnown RBP21.88■■□□□ 1.09
RANBP3-201ENST00000034275 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
RANBP3-201ENST00000034275 DCAF5Q96JK2 942 aa21.88■■□□□ 1.09
RANBP3-201ENST00000034275 TRPC5Q9UL62 973 aaPredicted RBP21.88■■□□□ 1.09
RANBP3-201ENST00000034275 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.87■■□□□ 1.09
RANBP3-201ENST00000034275 CEMIPQ8WUJ3 1361 aa21.87■■□□□ 1.09
RANBP3-201ENST00000034275 TEFQ10587 303 aa21.87■■□□□ 1.09
RANBP3-201ENST00000034275 TAF7Q15545 349 aaPredicted RBP21.87■■□□□ 1.09
RANBP3-201ENST00000034275 TSR2Q969E8 191 aaKnown RBP21.87■■□□□ 1.09
RANBP3-201ENST00000034275 FANCIQ9NVI1 1328 aa21.86■■□□□ 1.09
RANBP3-201ENST00000034275 CHL1O00533 1208 aa21.86■■□□□ 1.09
RANBP3-201ENST00000034275 DDB1Q16531 1140 aa21.86■■□□□ 1.09
RANBP3-201ENST00000034275 GJD4Q96KN9 370 aaPredicted RBP21.86■■□□□ 1.09
RANBP3-201ENST00000034275 FAM98CQ17RN3 349 aaKnown RBP21.85■■□□□ 1.09
RANBP3-201ENST00000034275 QTRT2Q9H974 415 aaKnown RBP21.84■■□□□ 1.09
RANBP3-201ENST00000034275 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
RANBP3-201ENST00000034275 NKX1-1Q15270 411 aaPredicted RBP21.84■■□□□ 1.09
RANBP3-201ENST00000034275 BABAM1Q9NWV8 329 aa21.84■■□□□ 1.09
RANBP3-201ENST00000034275 TSPYL4Q9UJ04 414 aa21.82■■□□□ 1.08
RANBP3-201ENST00000034275 ZNF772Q68DY9 489 aaPredicted RBP21.82■■□□□ 1.08
RANBP3-201ENST00000034275 MIS18AQ9NYP9 233 aa21.82■■□□□ 1.08
RANBP3-201ENST00000034275 EXOSC9Q06265 439 aaKnown RBP21.81■■□□□ 1.08
RANBP3-201ENST00000034275 RCAN3Q9UKA8 241 aa21.81■■□□□ 1.08
RANBP3-201ENST00000034275 ATRNO75882 1429 aa21.81■■□□□ 1.08
RANBP3-201ENST00000034275 WNK3Q9BYP7 1800 aa21.8■■□□□ 1.08
RANBP3-201ENST00000034275 A0A0G2JS52 829 aa21.8■■□□□ 1.08
RANBP3-201ENST00000034275 MYT1Q01538 1121 aa21.8■■□□□ 1.08
RANBP3-201ENST00000034275 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
RANBP3-201ENST00000034275 CT47B1P0C2W7 299 aaPredicted RBP21.79■■□□□ 1.08
RANBP3-201ENST00000034275 SLC52A2Q9HAB3 445 aa21.79■■□□□ 1.08
RANBP3-201ENST00000034275 KDM6AO15550 1401 aaPredicted RBP21.79■■□□□ 1.08
RANBP3-201ENST00000034275 ERVV-2B6SEH9 535 aa21.79■■□□□ 1.08
RANBP3-201ENST00000034275 CABP4P57796 275 aa21.79■■□□□ 1.08
RANBP3-201ENST00000034275 NFATC2IPQ8NCF5 419 aa21.79■■□□□ 1.08
RANBP3-201ENST00000034275 LRRC37A3O60309 1634 aa21.78■■□□□ 1.08
RANBP3-201ENST00000034275 TNS2Q63HR2 1409 aa21.78■■□□□ 1.08
RANBP3-201ENST00000034275 VIRMAQ69YN4 1812 aaKnown RBP21.77■■□□□ 1.08
RANBP3-201ENST00000034275 SCN11AQ9UI33 1791 aa21.77■■□□□ 1.08
RANBP3-201ENST00000034275 SHANK3Q9BYB0 1731 aa21.77■■□□□ 1.08
RANBP3-201ENST00000034275 ADAMTS7Q9UKP4 1686 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms