RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Abca3Q8R420 1704 aa20.24■□□□□ 0.83
Ccdc88c-204ENSMUST00000223097 NppbP40753 121 aa20.22■□□□□ 0.83
Ccdc88c-204ENSMUST00000223097 ApobrQ8VBT6 942 aa20.22■□□□□ 0.83
Ccdc88c-204ENSMUST00000223097 Aplp2Q06335 707 aa20.21■□□□□ 0.83
Ccdc88c-204ENSMUST00000223097 4930572O03RikQ8C5Y0 211 aa20.2■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Rnaseh2aQ9CWY8 301 aa20.2■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Bicdl1A0JNT9 577 aa20.19■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 ThemisQ8BGW0 636 aa20.19■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Larp1Q6ZQ58 1072 aaKnown RBP20.18■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Adgre1Q61549 931 aa20.17■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Shank3Q4ACU6 1730 aa20.16■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Ccnl1Q52KE7 532 aaKnown RBP20.15■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Rad17Q6NXW6 688 aa20.15■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Ppp1r37Q8BKR5 712 aa20.15■□□□□ 0.82
Ccdc88c-204ENSMUST00000223097 Simc1E9Q6E9 1354 aa20.14■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Sumf1Q8R0F3 372 aa20.14■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Hoxd11P23813 323 aa20.12■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 CoblQ5NBX1 1337 aaKnown RBP20.11■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Slc4a1apE9PX68 744 aa20.11■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Hoxb7P09024 217 aa20.11■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Socs7Q8VHQ2 579 aa20.11■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Camkk2Q8C078 588 aa20.1■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Spon1Q8VCC9 807 aa20.1■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Sned1Q70E20 1403 aa20.1■□□□□ 0.81
Ccdc88c-204ENSMUST00000223097 Tmf1B9EKI3 1091 aa20.07■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Cyp2c69E9PXC3 491 aa20.07■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Cyp2c40P56657 491 aa20.07■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Slc24a1Q91WD8 1130 aa20.06■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Kiaa1107Q80TK0 1369 aa20.06■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Gm13023A2A8N2 498 aa20.05■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Hdac6Q9Z2V5 1149 aa20.05■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Kdm6aO70546 1401 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Gm21663A0A0G2JE01 267 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Gm7361D3Z6R1 267 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 5031410I06RikE9Q4E0 267 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Gm1979E9QAN3 267 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Gm5862K7N5V5 267 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Gm10220K7N660 267 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Tgfb2P27090 414 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 SnrkQ8VDU5 748 aa20.04■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Eya1P97767 591 aa20.03■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Eif3bQ8JZQ9 803 aaKnown RBP20.03■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Spata31d1bE9QA57 1361 aa20.03■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 IbtkQ6ZPR6 1352 aaKnown RBP20.02■□□□□ 0.8
Ccdc88c-204ENSMUST00000223097 Parp14Q2EMV9 1817 aa20.02■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Smarcc1P97496 1104 aa20.01■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 ArsiQ32KI9 573 aa20.01■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Slc5a1Q8C3K6 665 aa20.01■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 FktnQ8R507 461 aa20.01■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Ppargc1bQ8VHJ7 1014 aa20.01■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Taf1dQ9D4V4 322 aa20.01■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Cyp2c67Q569X9 491 aa19.99■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 CpzQ8R4V4 654 aa19.99■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Crb1Q8VHS2 1405 aa19.99■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 PappaQ8R4K8 1624 aa19.98■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Casz1Q9CWL2 1761 aa19.98■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Msh6P54276 1358 aaKnown RBP19.96■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Ints5Q8CHT3 1018 aa19.96■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Atg3Q9CPX6 314 aa19.96■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Rpgrip1Q9EPQ2 1331 aa19.96■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 UtrnE9Q6R7 3430 aa19.96■□□□□ 0.79
Ccdc88c-204ENSMUST00000223097 Miga2Q8BK03 593 aa19.95■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 ScaperF8VQ70 1398 aaKnown RBP19.95■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Eif4a2P10630 407 aa19.94■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Asic4Q7TNS7 539 aa19.94■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Jmjd4Q8BFT6 427 aa19.94■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Plch1Q4KWH5 1682 aa19.94■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Akap2O54931 893 aa19.93■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 TrhQ62361 256 aa19.92■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Phkg2Q9DB30 406 aa19.92■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Tns2Q8CGB6 1400 aa19.92■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Tlr8P58682 1032 aa19.91■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Dcaf5Q80T85 946 aa19.91■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Dcaf11Q91VU6 549 aa19.91■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 RtcbQ99LF4 505 aaKnown RBP19.91■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Ubr3Q5U430 1889 aa19.9■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 1810065E05RikQ5NC41 235 aa19.9■□□□□ 0.78
Ccdc88c-204ENSMUST00000223097 Cfap70D3YVL2 1141 aa19.89■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Cyp2c68K7N6C2 491 aa19.89■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Cap2Q9CYT6 476 aa19.88■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Pdzd9Q9D9M4 266 aa19.88■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Tjp1P39447 1745 aaKnown RBP19.88■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 PnisrA2AJT4 805 aaKnown RBP19.87■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Gtpbp6Q3U6U5 514 aa19.87■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Ssfa2Q922B9 1252 aa19.87■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Col11a2Q64739 1736 aa19.86■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 MpripP97434 1024 aa19.86■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 NogP97466 232 aa19.86■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.85■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Sos1Q62245 1319 aa19.84■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Megf6Q80V70 1572 aa19.84■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Pde3aQ9Z0X4 1141 aa19.84■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Nedd4P46935 887 aaKnown RBP19.83■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Podxl2Q8CAE9 603 aa19.83■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Amhr2Q8K592 568 aa19.83■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Chmp7Q8R1T1 451 aa19.83■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 Pank3Q8R2W9 370 aa19.83■□□□□ 0.77
Ccdc88c-204ENSMUST00000223097 B4galnt4Q766D5 1034 aa19.82■□□□□ 0.76
Ccdc88c-204ENSMUST00000223097 Upf1Q9EPU0 1124 aaKnown RBP19.82■□□□□ 0.76
Ccdc88c-204ENSMUST00000223097 Cwc22Q8C5N3 908 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms