RNA–Protein interactions for RNA: ENSMUST00000113701.7

Tpm1-214, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,677 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-214ENSMUST00000113701 Ginm1Q91WR6 327 aa19.67■□□□□ 0.74
Tpm1-214ENSMUST00000113701 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.66■□□□□ 0.74
Tpm1-214ENSMUST00000113701 Kcnh4A2A5F7 1018 aa19.66■□□□□ 0.74
Tpm1-214ENSMUST00000113701 Aplp2Q06335 707 aa19.66■□□□□ 0.74
Tpm1-214ENSMUST00000113701 Ttc21aQ8C0S4 1314 aa19.64■□□□□ 0.74
Tpm1-214ENSMUST00000113701 Ssfa2Q922B9 1252 aa19.64■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Psrc1Q9D0P7 329 aa19.64■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Sos1Q62245 1319 aa19.64■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Mast2Q60592 1734 aa19.64■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Rtf1A2AQ19 715 aaKnown RBP19.63■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Neurod2Q62414 383 aa19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Atxn3Q9CVD2 355 aa19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Ankrd50F7BE84 1390 aa19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 PappaQ8R4K8 1624 aa19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Nwd2Q6P5U7 1742 aa19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Gnai1B2RSH2 354 aa19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Eif3bQ8JZQ9 803 aaKnown RBP19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Phkg2Q9DB30 406 aa19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Gnai3Q9DC51 354 aa19.62■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Kank1E9Q238 1360 aa19.59■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Sf3b2Q3UJB0 878 aaKnown RBP19.59■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Fam50bQ9WTJ8 334 aa19.59■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Ubr2Q6WKZ8 1755 aa19.59■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Pdzd9Q9D9M4 266 aa19.59■□□□□ 0.73
Tpm1-214ENSMUST00000113701 Ltbp1Q8CG19 1712 aa19.58■□□□□ 0.72
Tpm1-214ENSMUST00000113701 NudcO35685 332 aaKnown RBP19.58■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Ankrd23Q812A3 306 aa19.58■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Plekhh1Q80TI1 1356 aa19.57■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Elp1Q7TT37 1333 aaKnown RBP19.57■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Sik1Q60670 779 aa19.57■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Upf2A2AT37 1269 aaKnown RBP19.56■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Speer4bQ9D9F7 267 aa19.56■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Chmp7Q8R1T1 451 aa19.55■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Cdc37l1Q9CZP7 335 aa19.55■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Igsf1Q7TQA1 1317 aa19.54■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Gm21680A0A0G2JGR8 267 aa19.54■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Eno4Q8C042 619 aa19.54■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Snap23O09044 210 aa19.53■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Ccar1Q8CH18 1146 aaKnown RBP19.53■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Rbm25B2RY56 838 aaKnown RBP19.52■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Exoc5Q3TPX4 708 aa19.52■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Asic4Q7TNS7 539 aa19.52■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Foxp4Q9DBY0 795 aaKnown RBP19.52■□□□□ 0.72
Tpm1-214ENSMUST00000113701 Ksr2Q3UVC0 959 aa19.52■□□□□ 0.71
Tpm1-214ENSMUST00000113701 CastP51125 788 aa19.5■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Ddb1Q3U1J4 1140 aaKnown RBP19.49■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Slc5a1Q8C3K6 665 aa19.49■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Prim1P20664 417 aa19.49■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Fbln2P37889 1221 aa19.49■□□□□ 0.71
Tpm1-214ENSMUST00000113701 L3mbtl2P59178 703 aa19.49■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Gas2l2Q5SSG4 860 aa19.49■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Larp1Q6ZQ58 1072 aaKnown RBP19.49■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Ccdc171E9Q1U1 1324 aa19.48■□□□□ 0.71
Tpm1-214ENSMUST00000113701 GapdhsQ64467 440 aa19.48■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Nkx2-3P97334 362 aa19.47■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Ggnbp2Q5SV77 696 aa19.47■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Erbb3Q61526 1339 aa19.47■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Tjp1P39447 1745 aaKnown RBP19.47■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Gm21663A0A0G2JE01 267 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Fam71e1A1L3C1 212 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Gm7361D3Z6R1 267 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 5031410I06RikE9Q4E0 267 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Gm1979E9QAN3 267 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Gm5862K7N5V5 267 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Gm10220K7N660 267 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Usp16Q99LG0 825 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Crb1Q8VHS2 1405 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 4930523C07RikE9Q2T4 99 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Sgsm1Q8BPQ7 1093 aa19.46■□□□□ 0.71
Tpm1-214ENSMUST00000113701 Ly75Q60767 1723 aa19.44■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Vamp4O70480 141 aa19.43■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Btbd11Q6GQW0 1109 aa19.43■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Dlg5E9Q9R9 1921 aa19.43■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Atf5O70191 283 aa19.43■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Cavin2Q63918 418 aaKnown RBP19.43■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Klhdc4Q921I2 584 aa19.43■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Msh6P54276 1358 aaKnown RBP19.42■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Col1a2Q01149 1372 aa19.42■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Eif4a1P60843 406 aaKnown RBP19.41■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Shank3Q4ACU6 1730 aa19.41■□□□□ 0.7
Tpm1-214ENSMUST00000113701 U2surpQ6NV83 1029 aaKnown RBP19.41■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Ints5Q8CHT3 1018 aa19.41■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Tnnt3Q9QZ47 272 aa19.41■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Tiam2Q6ZPF3 1715 aa19.4■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Taok3Q8BYC6 898 aa19.4■□□□□ 0.7
Tpm1-214ENSMUST00000113701 Trap1aP19473 224 aa19.4■□□□□ 0.7
Tpm1-214ENSMUST00000113701 BcorQ8CGN4 1759 aa19.39■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Eif5bQ05D44 1216 aaKnown RBP19.39■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Ccdc155Q80VJ8 648 aa19.38■□□□□ 0.69
Tpm1-214ENSMUST00000113701 ApobrQ8VBT6 942 aa19.38■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Rwdd1Q9CQK7 243 aa19.38■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Ccnl1Q52KE7 532 aaKnown RBP19.37■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Abca3Q8R420 1704 aa19.37■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Cers3Q1A3B0 383 aa19.36■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Ppp6r1Q7TSI3 856 aa19.36■□□□□ 0.69
Tpm1-214ENSMUST00000113701 KarsQ99MN1 595 aaKnown RBP19.36■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Nsd3Q6P2L6 1439 aa19.36■□□□□ 0.69
Tpm1-214ENSMUST00000113701 AceP09470 1312 aa19.36■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Tmem119Q8R138 280 aa19.36■□□□□ 0.69
Tpm1-214ENSMUST00000113701 Adcy9P51830 1353 aa19.35■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms