RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Prom2Q3UUY6 835 aa24.27■■□□□ 1.48
Usf3-201ENSMUST00000088356 Larp1Q6ZQ58 1072 aaKnown RBP24.27■■□□□ 1.48
Usf3-201ENSMUST00000088356 Znrd1-asQ8R0E5 213 aa24.27■■□□□ 1.48
Usf3-201ENSMUST00000088356 Aplp2Q06335 707 aa24.26■■□□□ 1.47
Usf3-201ENSMUST00000088356 ApobrQ8VBT6 942 aa24.26■■□□□ 1.47
Usf3-201ENSMUST00000088356 PappaQ8R4K8 1624 aa24.24■■□□□ 1.47
Usf3-201ENSMUST00000088356 Parp14Q2EMV9 1817 aa24.24■■□□□ 1.47
Usf3-201ENSMUST00000088356 Simc1E9Q6E9 1354 aa24.24■■□□□ 1.47
Usf3-201ENSMUST00000088356 Sned1Q70E20 1403 aa24.22■■□□□ 1.47
Usf3-201ENSMUST00000088356 Bicdl1A0JNT9 577 aa24.22■■□□□ 1.47
Usf3-201ENSMUST00000088356 Rnaseh2aQ9CWY8 301 aa24.21■■□□□ 1.47
Usf3-201ENSMUST00000088356 Casz1Q9CWL2 1761 aa24.21■■□□□ 1.47
Usf3-201ENSMUST00000088356 Adgre1Q61549 931 aa24.2■■□□□ 1.46
Usf3-201ENSMUST00000088356 4930572O03RikQ8C5Y0 211 aa24.2■■□□□ 1.46
Usf3-201ENSMUST00000088356 Ccnl1Q52KE7 532 aaKnown RBP24.19■■□□□ 1.46
Usf3-201ENSMUST00000088356 ThemisQ8BGW0 636 aa24.18■■□□□ 1.46
Usf3-201ENSMUST00000088356 Ppp1r37Q8BKR5 712 aa24.18■■□□□ 1.46
Usf3-201ENSMUST00000088356 NppbP40753 121 aa24.17■■□□□ 1.46
Usf3-201ENSMUST00000088356 Sumf1Q8R0F3 372 aa24.17■■□□□ 1.46
Usf3-201ENSMUST00000088356 Socs7Q8VHQ2 579 aa24.16■■□□□ 1.46
Usf3-201ENSMUST00000088356 Hoxd11P23813 323 aa24.15■■□□□ 1.46
Usf3-201ENSMUST00000088356 Kdm6aO70546 1401 aa24.15■■□□□ 1.46
Usf3-201ENSMUST00000088356 CoblQ5NBX1 1337 aaKnown RBP24.14■■□□□ 1.46
Usf3-201ENSMUST00000088356 Slc4a1apE9PX68 744 aa24.14■■□□□ 1.45
Usf3-201ENSMUST00000088356 Kiaa1107Q80TK0 1369 aa24.13■■□□□ 1.45
Usf3-201ENSMUST00000088356 Plch1Q4KWH5 1682 aa24.12■■□□□ 1.45
Usf3-201ENSMUST00000088356 Ubr3Q5U430 1889 aa24.12■■□□□ 1.45
Usf3-201ENSMUST00000088356 Col11a2Q64739 1736 aa24.11■■□□□ 1.45
Usf3-201ENSMUST00000088356 Ppargc1bQ8VHJ7 1014 aa24.11■■□□□ 1.45
Usf3-201ENSMUST00000088356 Camkk2Q8C078 588 aa24.1■■□□□ 1.45
Usf3-201ENSMUST00000088356 Tjp1P39447 1745 aaKnown RBP24.1■■□□□ 1.45
Usf3-201ENSMUST00000088356 Hoxb7P09024 217 aa24.09■■□□□ 1.45
Usf3-201ENSMUST00000088356 Cyp2c69E9PXC3 491 aa24.08■■□□□ 1.45
Usf3-201ENSMUST00000088356 Cyp2c40P56657 491 aa24.08■■□□□ 1.45
Usf3-201ENSMUST00000088356 Rad17Q6NXW6 688 aa24.08■■□□□ 1.45
Usf3-201ENSMUST00000088356 Spon1Q8VCC9 807 aa24.08■■□□□ 1.45
Usf3-201ENSMUST00000088356 Crb1Q8VHS2 1405 aa24.07■■□□□ 1.44
Usf3-201ENSMUST00000088356 Gm21663A0A0G2JE01 267 aa24.06■■□□□ 1.44
Usf3-201ENSMUST00000088356 Gm13023A2A8N2 498 aa24.06■■□□□ 1.44
Usf3-201ENSMUST00000088356 Gm7361D3Z6R1 267 aa24.06■■□□□ 1.44
Usf3-201ENSMUST00000088356 5031410I06RikE9Q4E0 267 aa24.06■■□□□ 1.44
Usf3-201ENSMUST00000088356 Gm1979E9QAN3 267 aa24.06■■□□□ 1.44
Usf3-201ENSMUST00000088356 Gm5862K7N5V5 267 aa24.06■■□□□ 1.44
Usf3-201ENSMUST00000088356 Gm10220K7N660 267 aa24.06■■□□□ 1.44
Usf3-201ENSMUST00000088356 Slc24a1Q91WD8 1130 aa24.06■■□□□ 1.44
Usf3-201ENSMUST00000088356 Spata31d1bE9QA57 1361 aa24.05■■□□□ 1.44
Usf3-201ENSMUST00000088356 IbtkQ6ZPR6 1352 aaKnown RBP24.05■■□□□ 1.44
Usf3-201ENSMUST00000088356 Tns2Q8CGB6 1400 aa24.03■■□□□ 1.44
Usf3-201ENSMUST00000088356 Eya1P97767 591 aa24.03■■□□□ 1.44
Usf3-201ENSMUST00000088356 Hdac6Q9Z2V5 1149 aa24.03■■□□□ 1.44
Usf3-201ENSMUST00000088356 Trpm3Q5F4S9 1721 aa24.02■■□□□ 1.44
Usf3-201ENSMUST00000088356 Tmf1B9EKI3 1091 aa24.02■■□□□ 1.44
Usf3-201ENSMUST00000088356 Taf1dQ9D4V4 322 aa24.02■■□□□ 1.44
Usf3-201ENSMUST00000088356 UtrnE9Q6R7 3430 aa24.01■■□□□ 1.43
Usf3-201ENSMUST00000088356 Smarcc1P97496 1104 aa24■■□□□ 1.43
Usf3-201ENSMUST00000088356 ArsiQ32KI9 573 aa24■■□□□ 1.43
Usf3-201ENSMUST00000088356 Cyp2c67Q569X9 491 aa24■■□□□ 1.43
Usf3-201ENSMUST00000088356 Slc5a1Q8C3K6 665 aa24■■□□□ 1.43
Usf3-201ENSMUST00000088356 Eif3bQ8JZQ9 803 aaKnown RBP24■■□□□ 1.43
Usf3-201ENSMUST00000088356 CpzQ8R4V4 654 aa24■■□□□ 1.43
Usf3-201ENSMUST00000088356 SnrkQ8VDU5 748 aa24■■□□□ 1.43
Usf3-201ENSMUST00000088356 Togaram1Q6A070 1776 aaKnown RBP24■■□□□ 1.43
Usf3-201ENSMUST00000088356 FktnQ8R507 461 aa23.99■■□□□ 1.43
Usf3-201ENSMUST00000088356 ScaperF8VQ70 1398 aaKnown RBP23.99■■□□□ 1.43
Usf3-201ENSMUST00000088356 Msh6P54276 1358 aaKnown RBP23.99■■□□□ 1.43
Usf3-201ENSMUST00000088356 Tgfb2P27090 414 aa23.98■■□□□ 1.43
Usf3-201ENSMUST00000088356 Megf6Q80V70 1572 aa23.97■■□□□ 1.43
Usf3-201ENSMUST00000088356 Rpgrip1Q9EPQ2 1331 aa23.97■■□□□ 1.43
Usf3-201ENSMUST00000088356 C4bP01029 1738 aa23.96■■□□□ 1.43
Usf3-201ENSMUST00000088356 Akap2O54931 893 aa23.96■■□□□ 1.43
Usf3-201ENSMUST00000088356 Ints5Q8CHT3 1018 aa23.96■■□□□ 1.43
Usf3-201ENSMUST00000088356 Asic4Q7TNS7 539 aa23.95■■□□□ 1.42
Usf3-201ENSMUST00000088356 Eif4a2P10630 407 aa23.94■■□□□ 1.42
Usf3-201ENSMUST00000088356 Atg3Q9CPX6 314 aa23.94■■□□□ 1.42
Usf3-201ENSMUST00000088356 Tlr8P58682 1032 aa23.92■■□□□ 1.42
Usf3-201ENSMUST00000088356 Miga2Q8BK03 593 aa23.92■■□□□ 1.42
Usf3-201ENSMUST00000088356 StrcQ8VIM6 1809 aa23.91■■□□□ 1.42
Usf3-201ENSMUST00000088356 1810065E05RikQ5NC41 235 aa23.9■■□□□ 1.42
Usf3-201ENSMUST00000088356 Cyp2c68K7N6C2 491 aa23.89■■□□□ 1.41
Usf3-201ENSMUST00000088356 Phkg2Q9DB30 406 aa23.89■■□□□ 1.41
Usf3-201ENSMUST00000088356 TrhQ62361 256 aa23.88■■□□□ 1.41
Usf3-201ENSMUST00000088356 Jmjd4Q8BFT6 427 aa23.88■■□□□ 1.41
Usf3-201ENSMUST00000088356 Itgb4A2A863 1818 aa23.88■■□□□ 1.41
Usf3-201ENSMUST00000088356 Dcaf5Q80T85 946 aa23.87■■□□□ 1.41
Usf3-201ENSMUST00000088356 MpripP97434 1024 aa23.86■■□□□ 1.41
Usf3-201ENSMUST00000088356 Dcaf11Q91VU6 549 aa23.86■■□□□ 1.41
Usf3-201ENSMUST00000088356 RtcbQ99LF4 505 aaKnown RBP23.86■■□□□ 1.41
Usf3-201ENSMUST00000088356 Sos1Q62245 1319 aa23.85■■□□□ 1.41
Usf3-201ENSMUST00000088356 Cap2Q9CYT6 476 aa23.85■■□□□ 1.41
Usf3-201ENSMUST00000088356 Larp1bA0A0A6YXJ7 370 aaKnown RBP23.84■■□□□ 1.41
Usf3-201ENSMUST00000088356 Gtpbp6Q3U6U5 514 aa23.84■■□□□ 1.41
Usf3-201ENSMUST00000088356 B4galnt4Q766D5 1034 aa23.84■■□□□ 1.41
Usf3-201ENSMUST00000088356 Podxl2Q8CAE9 603 aa23.84■■□□□ 1.41
Usf3-201ENSMUST00000088356 Pdzd9Q9D9M4 266 aa23.84■■□□□ 1.41
Usf3-201ENSMUST00000088356 NogP97466 232 aa23.82■■□□□ 1.4
Usf3-201ENSMUST00000088356 Ssfa2Q922B9 1252 aa23.82■■□□□ 1.4
Usf3-201ENSMUST00000088356 Spef2Q8C9J3 1734 aa23.81■■□□□ 1.4
Usf3-201ENSMUST00000088356 PrxO55103 1391 aa23.81■■□□□ 1.4
Usf3-201ENSMUST00000088356 Frmpd3A0A140LIW3 1774 aa23.81■■□□□ 1.4
Usf3-201ENSMUST00000088356 VwdeQ6DFV8 926 aa23.81■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms