RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 Nup133Q8R0G9 1155 aa17.18■□□□□ 0.34
Chd4-201ENSMUST00000056889 Lman1Q9D0F3 517 aa17.18■□□□□ 0.34
Chd4-201ENSMUST00000056889 Knop1Q9Z2Q2 478 aaKnown RBP17.18■□□□□ 0.34
Chd4-201ENSMUST00000056889 Gse1Q3U3C9 1213 aa17.18■□□□□ 0.34
Chd4-201ENSMUST00000056889 Irgm2A0A140LIF8 407 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Dhx29Q6PGC1 1365 aaKnown RBP17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Ercc6lQ8BHK9 1240 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 MycnP03966 462 aaKnown RBP17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Cavin4A2AMM0 362 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Ggnbp2Q5SV77 696 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Ccdc93Q7TQK5 629 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Sass6Q80UK7 654 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Brf1Q8CFK2 676 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 ErbinQ80TH2 1402 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Ppfibp2O35711 882 aa17.17■□□□□ 0.34
Chd4-201ENSMUST00000056889 Serpinb6bO08804 377 aa17.16■□□□□ 0.34
Chd4-201ENSMUST00000056889 Mcm6P97311 821 aa17.16■□□□□ 0.34
Chd4-201ENSMUST00000056889 Lmbr1Q9JIT0 490 aa17.16■□□□□ 0.34
Chd4-201ENSMUST00000056889 Ttc19Q8CC21 365 aa17.16■□□□□ 0.34
Chd4-201ENSMUST00000056889 Snw1Q9CSN1 536 aaKnown RBP17.16■□□□□ 0.34
Chd4-201ENSMUST00000056889 Tmc2Q8R4P4 888 aa17.16■□□□□ 0.34
Chd4-201ENSMUST00000056889 Vps18Q8R307 973 aa17.15■□□□□ 0.34
Chd4-201ENSMUST00000056889 Smc1aQ9CU62 1233 aaKnown RBP17.15■□□□□ 0.34
Chd4-201ENSMUST00000056889 Cdkl5Q3UTQ8 938 aa17.15■□□□□ 0.34
Chd4-201ENSMUST00000056889 TatQ8QZR1 454 aa17.15■□□□□ 0.34
Chd4-201ENSMUST00000056889 Mnat1P51949 309 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Tubb6Q922F4 447 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Washc2Q6PGL7 1334 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Ces1hD3Z298 562 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Zranb3Q6NZP1 1069 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Iffo1Q8BXL9 562 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Trerf1Q8BXJ2 1205 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Rab3gap2Q8BMG7 1366 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 ImpactO55091 318 aa17.14■□□□□ 0.33
Chd4-201ENSMUST00000056889 Maco1Q7TQE6 664 aaKnown RBP17.13■□□□□ 0.33
Chd4-201ENSMUST00000056889 Prl7d1P04769 244 aa17.13■□□□□ 0.33
Chd4-201ENSMUST00000056889 Ccdc178Q8CDV0 866 aa17.13■□□□□ 0.33
Chd4-201ENSMUST00000056889 Ppfia3P60469 1194 aa17.13■□□□□ 0.33
Chd4-201ENSMUST00000056889 Cep131Q62036 1060 aa17.13■□□□□ 0.33
Chd4-201ENSMUST00000056889 Tacc1Q6Y685 774 aa17.13■□□□□ 0.33
Chd4-201ENSMUST00000056889 Cep120Q7TSG1 988 aa17.13■□□□□ 0.33
Chd4-201ENSMUST00000056889 Cdc37l1Q9CZP7 335 aa17.13■□□□□ 0.33
Chd4-201ENSMUST00000056889 Ddx23D3Z0M9 819 aaKnown RBP17.12■□□□□ 0.33
Chd4-201ENSMUST00000056889 CebpzP53569 1052 aaKnown RBP17.12■□□□□ 0.33
Chd4-201ENSMUST00000056889 Stxbp4Q9WV89 557 aa17.12■□□□□ 0.33
Chd4-201ENSMUST00000056889 Gjb2Q00977 226 aa17.12■□□□□ 0.33
Chd4-201ENSMUST00000056889 Ankrd24Q80VM7 985 aa17.12■□□□□ 0.33
Chd4-201ENSMUST00000056889 Smarcc1P97496 1104 aa17.12■□□□□ 0.33
Chd4-201ENSMUST00000056889 Hdhd2Q3UGR5 259 aa17.12■□□□□ 0.33
Chd4-201ENSMUST00000056889 Zfp644E9QA22 1323 aa17.12■□□□□ 0.33
Chd4-201ENSMUST00000056889 Znf653Q6YND2 615 aa17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 SltmQ8CH25 1031 aaKnown RBP17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 SlmapQ3URD3 845 aa17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 Gnl3lQ6PGG6 577 aaKnown RBP17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 Acbd3Q8BMP6 525 aa17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 Q9D5Q8 446 aa17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 Gm21680A0A0G2JGR8 267 aa17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 Plekhd1B2RPU2 505 aa17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 Rasa1E9PYG6 1038 aa17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 Puf60Q3UEB3 564 aaKnown RBP17.11■□□□□ 0.33
Chd4-201ENSMUST00000056889 Pus7B7ZNL8 666 aaKnown RBP17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Zbtb21E9Q444 1094 aa17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 MvpQ9EQK5 861 aa17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Ccdc12Q8R344 166 aaKnown RBP17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 LarsQ8BMJ2 1178 aa17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Smtnl1Q99LM3 459 aa17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Q9D9H8 365 aa17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Mmel1Q9JLI3 765 aa17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Tnni2P13412 182 aa17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Ltv1Q6NSQ7 470 aaKnown RBP17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Stard3nlQ9DCI3 235 aa17.1■□□□□ 0.33
Chd4-201ENSMUST00000056889 Zswim4Q8C7B8 1101 aa17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 Krt84Q99M73 603 aa17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 Abcf1Q6P542 837 aaKnown RBP17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 Txndc16Q7TN22 820 aa17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 StambpQ9CQ26 424 aa17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 Klhl10Q9D5V2 608 aa17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 Cct2P80314 535 aaKnown RBP17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 Gtf3c5Q8R2T8 520 aa17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 DonsonQ9QXP4 560 aa17.09■□□□□ 0.33
Chd4-201ENSMUST00000056889 Rrs1Q9CYH6 365 aaKnown RBP17.08■□□□□ 0.33
Chd4-201ENSMUST00000056889 Sh3d21Q7TSG5 549 aa17.08■□□□□ 0.33
Chd4-201ENSMUST00000056889 Sept14Q9DA97 430 aa17.08■□□□□ 0.33
Chd4-201ENSMUST00000056889 HypkQ9CR41 129 aa17.08■□□□□ 0.32
Chd4-201ENSMUST00000056889 Igf2bp2Q5SF07 592 aaKnown RBP17.08■□□□□ 0.32
Chd4-201ENSMUST00000056889 Ankrd40Q5SUE8 363 aa17.08■□□□□ 0.32
Chd4-201ENSMUST00000056889 Gng11P61953 73 aa17.07■□□□□ 0.32
Chd4-201ENSMUST00000056889 Tsg101Q61187 391 aa17.07■□□□□ 0.32
Chd4-201ENSMUST00000056889 Ccdc66Q6NS45 935 aa17.07■□□□□ 0.32
Chd4-201ENSMUST00000056889 Rhot2Q8JZN7 620 aa17.07■□□□□ 0.32
Chd4-201ENSMUST00000056889 Nop53Q8BK35 484 aaKnown RBP17.07■□□□□ 0.32
Chd4-201ENSMUST00000056889 AidaQ8C4Q6 305 aa17.07■□□□□ 0.32
Chd4-201ENSMUST00000056889 Sept6Q9R1T4 434 aa17.07■□□□□ 0.32
Chd4-201ENSMUST00000056889 Lrrfip1Q3UZ39 729 aaKnown RBP17.06■□□□□ 0.32
Chd4-201ENSMUST00000056889 Hsf2bpQ9D4G2 338 aa17.06■□□□□ 0.32
Chd4-201ENSMUST00000056889 Ddx46Q569Z5 1032 aaKnown RBP17.06■□□□□ 0.32
Chd4-201ENSMUST00000056889 Wasf1Q8R5H6 559 aa17.06■□□□□ 0.32
Chd4-201ENSMUST00000056889 Cfap69Q8BH53 942 aa17.06■□□□□ 0.32
Chd4-201ENSMUST00000056889 Tmem132aQ922P8 1018 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 97.4 ms