RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 4921504E06RikQ8CET2 560 aa10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Nop56Q9D6Z1 580 aaKnown RBP10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Kif1cO35071 1100 aaKnown RBP10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Iqsec3Q3TES0 1195 aa10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Axdnd1Q3UZ57 424 aa10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Pmfbp1Q9WVQ0 1022 aa10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Mterf4Q8BVN4 346 aa10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Trmt6Q8CE96 497 aa10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 IkbkgO88522 412 aa10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Mkrn1Q9QXP6 481 aa10.58□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Rrp15Q9CYX7 281 aaKnown RBP10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Golim4Q8BXA1 655 aa10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Tmem259Q8CIV2 574 aa10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Smc1aQ9CU62 1233 aaKnown RBP10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 FibpQ9JI19 357 aa10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 PrphP15331 475 aa10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Nol8Q3UHX0 1147 aaKnown RBP10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Cpsf2O35218 782 aaKnown RBP10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Clec16aQ80U30 1036 aa10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 ImmtQ8CAQ8 757 aaKnown RBP10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Erich5Q8K0S2 362 aa10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Zmat2Q9CPW7 199 aa10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 IkQ9Z1M8 557 aaKnown RBP10.57□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Fyb1O35601 819 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Hspa4Q61316 841 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 WaplQ65Z40 1200 aaKnown RBP10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Krt13P08730 437 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Dpf3P58269 378 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Rhbdl3P58873 404 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Fam117bQ3U3E2 584 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Agtpbp1Q641K1 1218 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Rimbp2Q80U40 1072 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Fosl1P48755 273 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Spty2d1Q68FG3 682 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Gbp9Q8BTS3 619 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Rtf1A2AQ19 715 aaKnown RBP10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Erc1Q99MI1 1120 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Phf14Q9D4H9 881 aa10.56□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Ltv1Q6NSQ7 470 aaKnown RBP10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Recql4Q75NR7 1216 aaKnown RBP10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Gm7347D3YYI9 267 aa10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 VdrP48281 422 aa10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Hcls1P49710 486 aaKnown RBP10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Cep85Q8BMK0 761 aa10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Srek1Q8BZX4 494 aaKnown RBP10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Asic2Q925H0 512 aa10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Utp3Q9JI13 469 aaKnown RBP10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Syce3B5KM66 88 aa10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Ogfod1Q3U0K8 545 aa10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Epb41l3Q9WV92 929 aa10.55□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Taf4bG5E8Z2 855 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 CstaP56567 97 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Ubn1Q4G0F8 1135 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Frmd4aQ8BIE6 1020 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Psma8Q9CWH6 250 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Kif3cO35066 796 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Gm17615E9Q9P2 165 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Krt15Q61414 452 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Slf2Q6P9P0 1278 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Rasa4Q6PFQ7 802 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Cfap57Q9D180 1249 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Mapk9Q9WTU6 423 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Klhl42Q8BFQ9 493 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Tmco5aQ9D9D5 303 aa10.54□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Prr18Q6PAN7 307 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Ccdc38Q8CDN8 563 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Maged1Q9QYH6 775 aaKnown RBP10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Apba2P98084 750 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Ccdc69Q3TCJ8 202 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Gemin4Q6P6L6 1058 aaKnown RBP10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Fmnl3Q6ZPF4 1028 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 PygbQ8CI94 843 aaKnown RBP10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 NptxrQ99J85 493 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Ube4aE9Q735 1028 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Atad2Q8CDM1 1040 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Get4Q9D1H7 327 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Vti1aO89116 217 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Ddx46Q569Z5 1032 aaKnown RBP10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Gigyf2Q6Y7W8 1291 aaKnown RBP10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Taf12Q8VE65 161 aa10.53□□□□□ -0.72
Clcn3-202ENSMUST00000056508 NppbP40753 121 aa10.52□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Jarid2Q62315 1234 aa10.52□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Grk2Q99MK8 689 aa10.52□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Lgr5Q9Z1P4 907 aa10.52□□□□□ -0.72
Clcn3-202ENSMUST00000056508 Rtl1Q7M732 1744 aa10.52□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Usp25P57080 1055 aa10.52□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Speer4bQ9D9F7 267 aa10.52□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Myl3P09542 204 aa10.52□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Tmod2Q9JKK7 351 aa10.52□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Daam1Q8BPM0 1077 aa10.52□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Chmp5Q9D7S9 219 aa10.52□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Hip1rQ9JKY5 1068 aa10.52□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Irf6P97431 467 aa10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 HmmrQ00547 794 aaKnown RBP10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Cep57l1Q8VDS7 400 aa10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Prpf4bQ61136 1007 aaKnown RBP10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ipo5Q8BKC5 1097 aaKnown RBP10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 GlmnQ8BZM1 596 aa10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Tbc1d8Q9Z1A9 1134 aa10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Cplx2P84086 134 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms