RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Ankrd44B2RXR6 993 aa14.32□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Vamp4O70480 141 aa14.32□□□□□ -0.12
Shtn1-201ENSMUST00000047511 4933402E13RikQ9D4D2 429 aa14.32□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Sh3bgrQ9WUZ7 214 aa14.32□□□□□ -0.12
Shtn1-201ENSMUST00000047511 PalldQ9ET54 1408 aa14.32□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Slc26a8Q8R0C3 999 aa14.31□□□□□ -0.12
Shtn1-201ENSMUST00000047511 FanclQ9CR14 375 aa14.31□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Dmrt2Q8BG36 561 aa14.31□□□□□ -0.12
Shtn1-201ENSMUST00000047511 CalcaP70160 136 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Aifm3Q3TY86 605 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Ddx17Q501J6 650 aaKnown RBP14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Fkbp5Q64378 456 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Sugp2Q8CH09 1067 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Rrs1Q9CYH6 365 aaKnown RBP14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Bicdl1A0JNT9 577 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Plekhd1B2RPU2 505 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Wdr78E9PYY5 807 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 GpkowQ56A08 488 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Fam43aQ8BUP8 424 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Noc3lQ8VI84 807 aaKnown RBP14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Bicd2Q921C5 820 aa14.3□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Tarbp1E9Q368 1579 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Flad1Q8R123 492 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Utp3Q9JI13 469 aaKnown RBP14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Nckap5lQ6GQX2 1323 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Pprc1Q6NZN1 1644 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 VeztQ3ZK22 780 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 1700010I14RikQ7TPG0 532 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Zcchc11B2RX14 1644 aaKnown RBP14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 AU019823E9PUQ3 292 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Klf15Q9EPW2 415 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Yeats2Q3TUF7 1407 aa14.29□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Ltv1Q6NSQ7 470 aaKnown RBP14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Brf1Q8CFK2 676 aa14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Tshz3Q8CGV9 1081 aa14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Hfm1D3Z4R1 1434 aa14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Soga3Q6NZL0 945 aa14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Plcd3Q8K2J0 785 aa14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Map3k2Q61083 619 aa14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Q9D9S1 216 aa14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 PhaxQ9JJT9 385 aaKnown RBP14.28□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Sbno1Q689Z5 1390 aa14.27□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Igflr1Q3U4N7 345 aa14.27□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Ush1cQ9ES64 910 aa14.27□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Cpa2Q504N0 417 aa14.27□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Fam13bQ8K2H3 851 aa14.27□□□□□ -0.12
Shtn1-201ENSMUST00000047511 Tbc1d9Q3UYK3 1264 aa14.27□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Fam13aQ8BGI4 693 aa14.27□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Tmc1Q8R4P5 757 aa14.27□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Mast1Q9R1L5 1570 aa14.27□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Dot1lQ6XZL8 1540 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Becn1O88597 448 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Fbln2P37889 1221 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Cplx1P63040 134 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Top1mtQ8R4U6 593 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Lamc1P02468 1607 aaKnown RBP14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Gm16486A0A1D5RMD1 1434 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Ints3Q7TPD0 1041 aaKnown RBP14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Gimap5Q8BWF2 308 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Dnajc5gQ8C632 165 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Nphp4P59240 1425 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Nlgn1Q99K10 843 aa14.26□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Cfap65Q3V0B4 1847 aa14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Ssh1Q76I79 1042 aa14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Talpid3E9PV87 1520 aa14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Pdia4P08003 638 aaKnown RBP14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Cplx2P84086 134 aa14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Wwc1Q5SXA9 1104 aa14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Il1rapl2Q9ERS6 686 aa14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Rlbp1Q9Z275 317 aa14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Ccp110Q7TSH4 1004 aa14.25□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Hoxb7P09024 217 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Washc4Q3UMB9 1173 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Agtpbp1Q641K1 1218 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Tpd52l1O54818 204 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Ppfia3P60469 1194 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Pof1bQ8K4L4 587 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Hnrnpul1Q8VDM6 859 aaKnown RBP14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Dnajc2P54103 621 aaKnown RBP14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Gripap1Q8VD04 806 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Tomm22Q9CPQ3 142 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Trpm2Q91YD4 1506 aa14.24□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Wdr63B2RY71 923 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Trim27Q62158 513 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Pola1P33609 1465 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Zkscan1Q8BGS3 561 aaKnown RBP14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Slc39a6Q8C145 765 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Trim34aQ99PP6 485 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Ankrd50F7BE84 1390 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Ell2Q3UKU1 639 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Slain2Q8CI08 581 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Skint5A7XUY5 1461 aa14.23□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Usp54Q8BL06 1588 aaKnown RBP14.22□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Me1P06801 572 aa14.22□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Irf9Q61179 399 aa14.22□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Mbd5B1AYB6 1498 aa14.22□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Eif3aP23116 1344 aaKnown RBP14.22□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Synj2Q9D2G5 1434 aa14.22□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Tpm3-rs7D3Z2H9 248 aa14.22□□□□□ -0.13
Shtn1-201ENSMUST00000047511 Gm973E9Q295 1059 aa14.22□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 65 ms