RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Gnl3lQ6PGG6 577 aaKnown RBP21.77■■□□□ 1.07
Ebf3-201ENSMUST00000033378 ItpripQ3TNL8 555 aa21.76■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Pms1Q8K119 917 aa21.76■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Slc26a8Q8R0C3 999 aa21.76■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Zkscan7E9PVW1 718 aa21.76■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Ccdc178Q8CDV0 866 aa21.76■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Noc3lQ8VI84 807 aaKnown RBP21.76■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Cdc45Q9Z1X9 566 aa21.75■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Mlh3A0A1Y7VMP7 1443 aa21.75■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Ccdc43Q9CR29 222 aaKnown RBP21.75■■□□□ 1.07
Ebf3-201ENSMUST00000033378 HnrnpmQ9D0E1 729 aaKnown RBP21.75■■□□□ 1.07
Ebf3-201ENSMUST00000033378 TimelessQ9R1X4 1197 aa21.75■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Gas2l3Q3UWW6 683 aa21.75■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Def6Q8C2K1 630 aa21.75■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Stx6Q9JKK1 255 aa21.75■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Dusp9Q7TNL7 452 aa21.74■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Serpina10Q8R121 448 aa21.74■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Atf7ipQ7TT18 1306 aa21.74■■□□□ 1.07
Ebf3-201ENSMUST00000033378 HmmrQ00547 794 aaKnown RBP21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Trim25Q61510 634 aaKnown RBP21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Ccdc66Q6NS45 935 aa21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Mmel1Q9JLI3 765 aa21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Lamc3Q9R0B6 1581 aa21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 CenpqQ9CPQ5 267 aa21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 ZwintQ9CQU5 252 aa21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Sass6Q80UK7 654 aa21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 FanclQ9CR14 375 aa21.73■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Rsph6aQ8CDR2 708 aa21.72■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Brd1E9PZ26 1189 aaKnown RBP21.72■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Odf2A3KGV1 830 aaKnown RBP21.71■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Washc4Q3UMB9 1173 aa21.71■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Spty2d1Q68FG3 682 aa21.71■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Fam13aQ8BGI4 693 aa21.71■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Rufy2Q8R4C2 606 aa21.71■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Mcm10Q0VBD2 885 aa21.71■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Btbd11Q6GQW0 1109 aa21.71■■□□□ 1.07
Ebf3-201ENSMUST00000033378 Jakmip2D3YXK0 820 aa21.7■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Ube2hP62257 183 aa21.7■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Gpatch8A2A6A1 1505 aa21.7■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Dnajc2P54103 621 aaKnown RBP21.7■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Trim27Q62158 513 aa21.7■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Fsd2Q8BZ52 692 aa21.7■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Phldb2Q8K1N2 1249 aa21.7■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Caskin1Q6P9K8 1431 aa21.7■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Erc1Q99MI1 1120 aa21.69■■□□□ 1.06
Ebf3-201ENSMUST00000033378 LlphQ9D945 130 aaKnown RBP21.69■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Kiaa0753Q6A000 959 aa21.69■■□□□ 1.06
Ebf3-201ENSMUST00000033378 MicalclQ9D5U9 680 aa21.69■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Zpr1Q62384 459 aa21.68■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Atp7aQ64430 1491 aa21.68■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Tango6Q8C3S2 1079 aa21.68■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Bloc1s4Q8VED2 215 aa21.68■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Erbb3Q61526 1339 aa21.67■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Il4rP16382 810 aa21.67■■□□□ 1.06
Ebf3-201ENSMUST00000033378 LifrP42703 1092 aa21.67■■□□□ 1.06
Ebf3-201ENSMUST00000033378 TbcaP48428 108 aaKnown RBP21.67■■□□□ 1.06
Ebf3-201ENSMUST00000033378 AU019823E9PUQ3 292 aa21.67■■□□□ 1.06
Ebf3-201ENSMUST00000033378 ScaperF8VQ70 1398 aaKnown RBP21.67■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Ncoa3O09000 1398 aa21.67■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Fnbp4Q6ZQ03 1031 aa21.67■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Trim30cD3YVI9 513 aa21.66■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Eva1cP58659 440 aa21.66■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Abcd1P48410 736 aa21.66■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Kdm2bQ6P1G2 1309 aa21.66■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Mrc2Q64449 1479 aa21.66■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Smg7Q5RJH6 1138 aaKnown RBP21.66■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Gas2l2Q5SSG4 860 aa21.66■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Nucb2P81117 420 aa21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Sycp1Q62209 993 aa21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Gigyf1Q99MR1 1044 aaKnown RBP21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Chd1lQ9CXF7 900 aa21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 UvssaQ9D479 717 aa21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Pdia3P27773 505 aaKnown RBP21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Ttc19Q8CC21 365 aa21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 CenppQ9CZ92 286 aa21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 CenphQ9QYM8 241 aa21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Igbp1bQ9QZ29 343 aa21.65■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Cdkl5Q3UTQ8 938 aa21.64■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Larp1Q6ZQ58 1072 aaKnown RBP21.64■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Polr3dQ91WD1 398 aa21.64■■□□□ 1.06
Ebf3-201ENSMUST00000033378 Grin2aP35436 1464 aa21.64■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Secisbp2lQ6A098 1086 aaKnown RBP21.64■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Uri1Q3TLD5 531 aa21.64■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Klhdc4Q921I2 584 aa21.64■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Wdr62Q3U3T8 1523 aa21.64■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Pik3r4Q8VD65 1358 aa21.63■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Thoc2B1AZI6 1594 aaKnown RBP21.63■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Zranb1Q7M760 708 aa21.63■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Mug2P28666 1451 aa21.63■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Neo1P97798 1493 aa21.63■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Paxbp1P58501 919 aa21.63■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Stxbp4Q9WV89 557 aa21.63■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Trim55G3X8Y1 545 aa21.62■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Slc13a4Q8BZ82 625 aa21.62■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Chaf1aQ9QWF0 911 aa21.62■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Gsdma2Q32M21 443 aa21.62■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Cfap73J3QPZ5 306 aa21.62■■□□□ 1.05
Ebf3-201ENSMUST00000033378 CebpzP53569 1052 aaKnown RBP21.62■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Gimap6Q8K349 305 aa21.62■■□□□ 1.05
Ebf3-201ENSMUST00000033378 Cfap45Q9D9U9 551 aa21.62■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms