RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 CD40LGP29965 261 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 GP5P40197 560 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 CREMQ03060 361 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 SRFBP1Q8NEF9 429 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 MAPRE3Q9UPY8 281 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 SETBP1Q9Y6X0 1596 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 PPP4CP60510 307 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 TTC27Q6P3X3 843 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 CHSY3Q70JA7 882 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 ABHD16BQ9H3Z7 469 aa16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACNA1A-258ENST00000638029 PER2O15055 1255 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 PIAS1O75925 651 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CD52P31358 61 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 YAP1P46937 504 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 TGFB2P61812 414 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 PPATQ06203 517 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 DEFB106AQ8N104 65 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 PCDH19Q8TAB3 1148 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 MYDGFQ969H8 173 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 C11orf16Q9NQ32 467 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CD163L1Q9NR16 1453 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 C9J4A7 227 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 MDM4O15151 490 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CHST15Q7LFX5 561 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ZNF567Q8N184 647 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 TCEANCQ8N8B7 351 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 SHC3Q92529 594 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 AP3S1Q92572 193 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 EXOSC8Q96B26 276 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ASB2Q96Q27 587 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 GLS2Q9UI32 602 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 NAALADL1Q9UQQ1 740 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CARD8Q9Y2G2 431 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ZNF726A6NNF4 738 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 JMJD7P0C870 316 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CAPGP40121 348 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ODF4Q2M2E3 257 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 KLHL26Q53HC5 615 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 GPR139Q6DWJ6 353 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 DENND5AQ6IQ26 1287 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 HMBOX1Q6NT76 420 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ZHX1-C8orf76Q96EF9 292 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 MMADHCQ9H3L0 296 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CNTNAP4Q9C0A0 1308 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 KCNJ13O60928 360 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CTDNEP1O95476 244 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 PSMB4P28070 264 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CHKAP35790 457 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 MOXD1Q6UVY6 613 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 SV2AQ7L0J3 742 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ZNF410Q86VK4 478 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ABRAQ8N0Z2 381 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 SMG7Q92540 1137 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 TMEM125Q96AQ2 219 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 RBM18Q96H35 190 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 MYO5BQ9ULV0 1848 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CCNKO75909 580 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ZNF823P16415 610 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 MAGEA11P43364 429 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ANTXR2P58335 489 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 PRKCDQ05655 676 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 INTS11Q5TA45 600 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 NUP54Q7Z3B4 507 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 LENG9Q96B70 501 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 FBRSQ9HAH7 460 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 HACD1B0YJ81 288 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ALDH5A1P51649 535 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 CNTN2Q02246 1040 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 VNN3Q9NY84 501 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 TMEM216Q9P0N5 145 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 ZNF639Q9UID6 485 aa16.24■□□□□ 0.19
CACNA1A-258ENST00000638029 EME2A4GXA9 379 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 WASHC1A8K0Z3 465 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 WASH3PC4AMC7 463 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 ACTR3P61158 418 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 ZNF792Q3KQV3 632 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 ZFP1Q6P2D0 407 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 WASH2PQ6VEQ5 465 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 TMEM110Q86TL2 294 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 OR52K2Q8NGK3 314 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 ZNF606Q8WXB4 792 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 SEMA6BQ9H3T3 888 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 ALG2Q9H553 416 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 PLEKHA6Q9Y2H5 1048 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 FER1L4A9Z1Z3 1794 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 MAGEC1O60732 1142 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 CYP1A1P04798 512 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 SERPINE1P05121 402 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 UBAP2LQ14157 1087 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 FAM83AQ86UY5 434 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 OR51V1Q9H2C8 321 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 ILF2Q12905 390 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 AFTPHQ6ULP2 937 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 SLC30A10Q6XR72 485 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 GPR65Q8IYL9 337 aa16.23■□□□□ 0.19
CACNA1A-258ENST00000638029 FBXO22Q8NEZ5 403 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms