RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 LPOP22079 712 aaPredicted RBP14.53□□□□□ -0.08
VPS36-207ENST00000611132 SLC5A2P31639 672 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 ALDH3A2P51648 485 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 BNC1Q01954 994 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 SULT2A1Q06520 285 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 SLC10A2Q12908 348 aaPredicted RBP14.53□□□□□ -0.08
VPS36-207ENST00000611132 CPSF6Q16630 551 aaKnown RBP eCLIP14.53□□□□□ -0.08
VPS36-207ENST00000611132 TMEM53Q6P2H8 277 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 GATAD2AQ86YP4 633 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 OR5K1Q8NHB7 308 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 HBEGFQ99075 208 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 GPR21Q99679 349 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 MAF1Q9H063 256 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 PIGVQ9NUD9 493 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 PEX16Q9Y5Y5 336 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 CEPT1Q9Y6K0 416 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 A0A1B0GW55 424 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 EFCAB9A8MZ26 197 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 DUX4L2P0CJ85 424 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 DUX4L3P0CJ86 424 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 DUX4L4P0CJ87 422 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 DUX4L5P0CJ88 424 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 DUX4L6P0CJ89 424 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 DUX4L7P0CJ90 424 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 C7P10643 843 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 DNAJB13P59910 316 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 SP2Q02086 613 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 ARMCX6Q7L4S7 300 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 NELL1Q92832 810 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 VPS35Q96QK1 796 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 ZNF347Q96SE7 839 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 DUX4Q9UBX2 424 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 ST14Q9Y5Y6 855 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 PHRF1Q9P1Y6 1649 aaKnown RBP14.53□□□□□ -0.08
VPS36-207ENST00000611132 YJEFN3A6XGL0 299 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 CXCR6O00574 342 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 PGLSO95336 258 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 GLDCP23378 1020 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 ERVK-8P63133 956 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 PPP1R3AQ16821 1122 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 CTXN3Q4LDR2 81 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 RABL3Q5HYI8 236 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 RPS27LQ71UM5 84 aaKnown RBP14.53□□□□□ -0.08
VPS36-207ENST00000611132 ARMC8Q8IUR7 673 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 CLHC1Q8NHS4 586 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 TMEM174Q8WUU8 243 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 ITPKCQ96DU7 683 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 A0A1W2PP18 115 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 FUOMA2VDF0 154 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 PSMD11O00231 422 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 CXCL11O14625 94 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 IL7RP16871 459 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 C4BPBP20851 252 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 MAGEA10P43363 369 aaPredicted RBP14.53□□□□□ -0.08
VPS36-207ENST00000611132 RELAQ04206 551 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 SLC22A16Q86VW1 577 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 BIRC7Q96CA5 298 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 MUS81Q96NY9 551 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 ANKRD60Q9BZ19 345 aa14.53□□□□□ -0.08
VPS36-207ENST00000611132 GSTM1P09488 218 aa14.52□□□□□ -0.08
VPS36-207ENST00000611132 DSC2Q02487 901 aa14.52□□□□□ -0.08
VPS36-207ENST00000611132 RBM20Q5T481 1227 aaKnown RBP14.52□□□□□ -0.08
VPS36-207ENST00000611132 CDH24Q86UP0 819 aa14.52□□□□□ -0.08
VPS36-207ENST00000611132 PIK3C3Q8NEB9 887 aa14.52□□□□□ -0.08
VPS36-207ENST00000611132 NSMCE3Q96MG7 304 aa14.52□□□□□ -0.08
VPS36-207ENST00000611132 C20orf27Q9GZN8 174 aa14.52□□□□□ -0.08
VPS36-207ENST00000611132 CLEC4MQ9H2X3 399 aaPredicted RBP14.52□□□□□ -0.08
VPS36-207ENST00000611132 PCDHB5Q9Y5E4 795 aa14.52□□□□□ -0.08
VPS36-207ENST00000611132 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.52□□□□□ -0.09
VPS36-207ENST00000611132 H0Y858 1186 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 SOCS2O14508 198 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 SNAP29O95721 258 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 TXNL4AP83876 142 aaKnown RBP14.52□□□□□ -0.09
VPS36-207ENST00000611132 MTA1Q13330 715 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 NPTX1Q15818 432 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 ZNF544Q6NX49 715 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 R3HCC1LQ7Z5L2 792 aaKnown RBP14.52□□□□□ -0.09
VPS36-207ENST00000611132 KLHL32Q96NJ5 620 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 CHCHD6Q9BRQ6 235 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 KIFC1Q9BW19 673 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 BPIFA1Q9NP55 256 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 TMPRSS4Q9NRS4 437 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 CDV3Q9UKY7 258 aaKnown RBP14.52□□□□□ -0.09
VPS36-207ENST00000611132 GSTK1Q9Y2Q3 226 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 NAV1Q8NEY1 1877 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 TJP1Q07157 1748 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 PIPSLA2A3N6 862 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 PRORSD1PA6NEY8 169 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 PLK4O00444 970 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 MSI1O43347 362 aaKnown RBP14.52□□□□□ -0.09
VPS36-207ENST00000611132 CD36P16671 472 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 CYP2A7P20853 494 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 HLCSP50747 726 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 ARSFP54793 590 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 DNASE1L3Q13609 305 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 EIF3MQ7L2H7 374 aaKnown RBP14.52□□□□□ -0.09
VPS36-207ENST00000611132 TMEM135Q86UB9 458 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 TTC29Q8NA56 475 aaPredicted RBP14.52□□□□□ -0.09
VPS36-207ENST00000611132 MZB1Q8WU39 189 aa14.52□□□□□ -0.09
VPS36-207ENST00000611132 STON2Q8WXE9 905 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms