RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GLIS1Q8NBF1 620 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 SPATA4Q8NEY3 305 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 KCNE4Q8WWG9 221 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 SLC39A7Q92504 469 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 NUS1Q96E22 293 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 C19orf43Q9BQ61 176 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 FICDQ9BVA6 458 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 DDX47Q9H0S4 455 aaKnown RBP15.55■□□□□ 0.08
USB1-208ENST00000563207 CDH19Q9H159 772 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 ZFYVE1Q9HBF4 777 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 RAD18Q9NS91 495 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 CD84Q9UIB8 345 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 PLEKHM1Q9Y4G2 1056 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 RNF215Q9Y6U7 377 aa15.55■□□□□ 0.08
USB1-208ENST00000563207 ARHGEF17Q96PE2 2063 aaPredicted RBP15.55■□□□□ 0.08
USB1-208ENST00000563207 C1orf232A0A0U1RR37 186 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 CDRT15L2A8MXV6 281 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 CACNB4O00305 520 aaPredicted RBP15.54■□□□□ 0.08
USB1-208ENST00000563207 TCEA3O75764 348 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 AGTP01019 485 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 CEACAM5P06731 702 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 ZSCAN5DPP0CG00 497 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 AK4P27144 223 aaPredicted RBP15.54■□□□□ 0.08
USB1-208ENST00000563207 STC1P52823 247 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 PDE1BQ01064 536 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 PTSQ03393 145 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 SRSF6Q13247 344 aaKnown RBP15.54■□□□□ 0.08
USB1-208ENST00000563207 PPP1R7Q15435 360 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 OGFOD3Q6PK18 319 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 ZNF765Q7L2R6 523 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 GPR155Q7Z3F1 870 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 MAATS1Q7Z4T9 603 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 HEATR4Q86WZ0 1026 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 LSMEM2Q8N112 164 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 SLC25A41Q8N5S1 370 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 WDR36Q8NI36 951 aaKnown RBP15.54■□□□□ 0.08
USB1-208ENST00000563207 PATE1Q8WXA2 126 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 SCG3Q8WXD2 468 aaKnown RBP15.54■□□□□ 0.08
USB1-208ENST00000563207 LRRN3Q9H3W5 708 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 WDR26Q9H7D7 661 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 EPB41L5Q9HCM4 733 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 PKD2L2Q9NZM6 624 aa15.54■□□□□ 0.08
USB1-208ENST00000563207 PRSS38A1L453 326 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 D6RAR5 112 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 ATXN7O15265 892 aaPredicted RBP15.53■□□□□ 0.08
USB1-208ENST00000563207 PPFIA2O75334 1257 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 CLDN7O95471 211 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 PYGLP06737 847 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 APRTP07741 180 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 TPSB2P20231 275 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 RBMS1P29558 406 aaKnown RBP15.53■□□□□ 0.08
USB1-208ENST00000563207 HMGCLP35914 325 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 MAGEA6P43360 314 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 MAZP56270 477 aaKnown RBP15.53■□□□□ 0.08
USB1-208ENST00000563207 BASP1P80723 227 aaKnown RBP15.53■□□□□ 0.08
USB1-208ENST00000563207 SARNPP82979 210 aaKnown RBP15.53■□□□□ 0.08
USB1-208ENST00000563207 DR1Q01658 176 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 DPTQ07507 201 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 CDH17Q12864 832 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 GPS1Q13098 491 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 PTK6Q13882 451 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 TPSAB1Q15661 275 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 ZDHHC20Q5W0Z9 365 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 DENND5AQ6IQ26 1287 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 TMC3Q7Z5M5 1100 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 TECPR1Q7Z6L1 1165 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 TRIM74Q86UV6 250 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 BRSK1Q8TDC3 778 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 DTD2Q96FN9 168 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 GFM1Q96RP9 751 aaKnown RBP15.53■□□□□ 0.08
USB1-208ENST00000563207 AGAP2Q99490 1192 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 GPR63Q9BZJ6 419 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 DPEP2Q9H4A9 486 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 CARS2Q9HA77 564 aaKnown RBP15.53■□□□□ 0.08
USB1-208ENST00000563207 THSD1Q9NS62 852 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.53■□□□□ 0.08
USB1-208ENST00000563207 ZNF711Q9Y462 761 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 PCDHGA8Q9Y5G5 932 aa15.53■□□□□ 0.08
USB1-208ENST00000563207 UNC13CQ8NB66 2214 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 CCDC187A0A096LP49 1063 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 EIF4E1BA6NMX2 242 aaKnown RBP15.52■□□□□ 0.08
USB1-208ENST00000563207 NDC80O14777 642 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 EFSO43281 561 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 B4GAT1O43505 415 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 ZNF500O60304 480 aaPredicted RBP15.52■□□□□ 0.08
USB1-208ENST00000563207 ZIC2O95409 532 aaPredicted RBP15.52■□□□□ 0.08
USB1-208ENST00000563207 CRTAMO95727 393 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 SOD1P00441 154 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 HOXC4P09017 264 aaPredicted RBP15.52■□□□□ 0.08
USB1-208ENST00000563207 ITIH1P19827 911 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 UGT1A5P35504 534 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 PTGIRP43119 386 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 CHRNA4P43681 627 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 SPINT3P49223 89 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 LAMB3Q13751 1172 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 HLTFQ14527 1009 aaKnown RBP eCLIP15.52■□□□□ 0.08
USB1-208ENST00000563207 TGIF1Q15583 401 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 TRIP13Q15645 432 aaPredicted RBP15.52■□□□□ 0.08
USB1-208ENST00000563207 CERCAMQ5T4B2 595 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 ARMC3Q5W041 872 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms