RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SNX20Q7Z614 316 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 PRSS58Q8IYP2 241 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 OVCA2Q8WZ82 227 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 ROGDIQ9GZN7 287 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 NOD2Q9HC29 1040 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 IGSF9Q9P2J2 1179 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 TIMM22Q9Y584 194 aa17.21■□□□□ 0.35
PTPN21-208ENST00000556564 KDELR3O43731 214 aa17.21■□□□□ 0.34
PTPN21-208ENST00000556564 ATP6V1B1P15313 513 aa17.21■□□□□ 0.34
PTPN21-208ENST00000556564 MPSTP25325 297 aa17.21■□□□□ 0.34
PTPN21-208ENST00000556564 HOXA11P31270 313 aaPredicted RBP17.21■□□□□ 0.34
PTPN21-208ENST00000556564 VIPR1P32241 457 aa17.21■□□□□ 0.34
PTPN21-208ENST00000556564 EXOC3L1Q86VI1 746 aa17.21■□□□□ 0.34
PTPN21-208ENST00000556564 TRIM69Q86WT6 500 aa17.21■□□□□ 0.34
PTPN21-208ENST00000556564 COQ6Q9Y2Z9 468 aa17.21■□□□□ 0.34
PTPN21-208ENST00000556564 HEBP2Q9Y5Z4 205 aa17.21■□□□□ 0.34
PTPN21-208ENST00000556564 IGKV6D-21A0A0A0MT36 114 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 PIPSLA2A3N6 862 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 BIKQ13323 160 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 GTF2H2Q13888 395 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 GTF2H2CQ6P1K8 395 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 ARHGAP36Q6ZRI8 547 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 ARCQ7LC44 396 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 OR52E6Q96RD3 313 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 RIBC2Q9H4K1 309 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 NUDT4Q9NZJ9 180 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 TRAF6Q9Y4K3 522 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 METTL18O95568 372 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 HLA-DQA2P01906 255 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 SCNN1AP37088 669 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 PITRM1Q5JRX3 1037 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 ZNF598Q86UK7 904 aaKnown RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 BTBD9Q96Q07 612 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 ANGPT4Q9Y264 503 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 HEPACAM2A8MVW5 462 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 STK16O75716 305 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 KRT75O95678 551 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 ZNF8P17098 575 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 CCDC142Q17RM4 750 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 APOLD1Q96LR9 279 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 SEMA6AQ9H2E6 1030 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 IPPKQ9H8X2 491 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 SPATA6Q9NWH7 488 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 SAGE1Q9NXZ1 904 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 LEF1Q9UJU2 399 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 FBXW2Q9UKT8 454 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 VIRMAQ69YN4 1812 aaKnown RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 SLC28A2O43868 658 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 SLC1A2P43004 574 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 CCNHP51946 323 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 DEFB103AP81534 67 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 TMEM154Q6P9G4 183 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 GPR180Q86V85 440 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 OSBPL6Q9BZF3 934 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 CYP8B1Q9UNU6 501 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 ACTL7BQ9Y614 415 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 CCDC162PA2VCL2 907 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 F7P08709 466 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 NT5EP21589 574 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 PTGER3P43115 390 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 CTSOP43234 321 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 ZNF132P52740 706 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 NRLP54845 237 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 OGDHQ02218 1023 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 LSM12Q3MHD2 195 aaKnown RBP17.2■□□□□ 0.34
PTPN21-208ENST00000556564 C22orf39Q6P5X5 142 aa17.2■□□□□ 0.34
PTPN21-208ENST00000556564 A0A0D9SEW6 157 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 CCDC189A1A4V9 331 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 SLC25A12O75746 678 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 IPO13O94829 963 aaKnown RBP17.19■□□□□ 0.34
PTPN21-208ENST00000556564 CLDN7O95471 211 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 CLDN9O95484 217 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 ME2P23368 584 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 SAMD4BQ5PRF9 694 aaKnown RBP17.19■□□□□ 0.34
PTPN21-208ENST00000556564 GPRIN1Q7Z2K8 1008 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 FCRL5Q96RD9 977 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 FOXO6A8MYZ6 492 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 KRT33AO76009 404 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 NUDT17P0C025 328 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 GHRHRQ02643 423 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 LMX1AQ8TE12 382 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 SETD7Q8WTS6 366 aaKnown RBP17.19■□□□□ 0.34
PTPN21-208ENST00000556564 KLF15Q9UIH9 416 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 CFAP20Q9Y6A4 193 aaKnown RBP17.19■□□□□ 0.34
PTPN21-208ENST00000556564 RUNX1T1Q06455 604 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 ALG11Q2TAA5 492 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 MPP5Q8N3R9 675 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 RFXANKO14593 260 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 ZNF623O75123 536 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 TRBC1P01850 177 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 FYNP06241 537 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 HNRNPA1P09651 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPN21-208ENST00000556564 IFNGR2P38484 337 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 PLEKHG4Q58EX7 1191 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 C9orf64Q5T6V5 341 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 MED27Q6P2C8 311 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 ITCHQ96J02 903 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 KLHL4Q9C0H6 718 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 SPHK2Q9NRA0 654 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms