RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TDRD1Q9BXT4 1180 aaKnown RBP14.67□□□□□ -0.06
DDX55-209ENST00000542286 ZNF225Q9UK10 706 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 USP22Q9UPT9 525 aa14.67□□□□□ -0.06
DDX55-209ENST00000542286 DNAH14Q0VDD8 3507 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 A0A0J9YYE9 177 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 SH3PXD2BA1X283 911 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 HGFP14210 728 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 HMGA1P17096 107 aaKnown RBP14.66□□□□□ -0.06
DDX55-209ENST00000542286 RPL10P27635 214 aaKnown RBP14.66□□□□□ -0.06
DDX55-209ENST00000542286 HK3P52790 923 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 KIAA1841Q6NSI8 718 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 TAS2R42Q7RTR8 314 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 IFNEQ86WN2 208 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 CROCCP3Q8IVE0 287 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 SLC22A9Q8IVM8 553 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 TMIGD2Q96BF3 282 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 BIRC8Q96P09 236 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 SLAMF8Q9P0V8 285 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 SEPT3Q9UH03 358 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 PCDHB9Q9Y5E1 797 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 FAM149AA5PLN7 773 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 AZIN1O14977 448 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 NRP2O60462 931 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 C1RP00736 705 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 SLC11A2P49281 568 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 RING1Q06587 406 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 HERC3Q15034 1050 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 HECTD3Q5T447 861 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 PATL1Q86TB9 770 aaKnown RBP14.66□□□□□ -0.06
DDX55-209ENST00000542286 SETD3Q86TU7 594 aaPredicted RBP14.66□□□□□ -0.06
DDX55-209ENST00000542286 FBXO39Q8N4B4 442 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 SLCO4A1Q96BD0 722 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 CCDC126Q96EE4 140 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 L3HYPDHQ96EM0 354 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 CLSTN3Q9BQT9 956 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.66□□□□□ -0.06
DDX55-209ENST00000542286 FNIP2Q9P278 1114 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 POLG2Q9UHN1 485 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 SNX13Q9Y5W8 968 aa14.66□□□□□ -0.06
DDX55-209ENST00000542286 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 MOXD2PA6NHM9 499 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 TRIM38O00635 465 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 BNIP3LO60238 219 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 TIPRLO75663 272 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 PORP16435 677 aaPredicted RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 PSMC3P17980 439 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 GPX3P22352 226 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 HTRA3P83110 453 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CLCQ05315 142 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 ZNF177Q13360 481 aaPredicted RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 CTSL3PQ5NE16 218 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 C6orf10Q5SRN2 563 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CXorf57Q6NSI4 855 aaKnown RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 NPAS4Q8IUM7 802 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CLYBLQ8N0X4 340 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 TRIML2Q8N7C3 387 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 SPATA17Q96L03 361 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CREBZFQ9NS37 354 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 MAP10Q9P2G4 905 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 EIF2B4Q9UI10 523 aaKnown RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 V9GYQ6 96 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 NRG2O14511 850 aaPredicted RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 HSPA1AP0DMV8 641 aaKnown RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 HSPA1BP0DMV9 641 aaKnown RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 CKMT2P17540 419 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CLCN2P51788 898 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 HK2P52789 917 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 NAA20P61599 178 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CREB5Q02930 508 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 C16orf72Q14CZ0 275 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 ADRM1Q16186 407 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 MTX3Q5HYI7 312 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CLDN19Q8N6F1 224 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 OR52B6Q8NGF0 335 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 FUBP1Q96AE4 644 aaKnown RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 SLX1AQ9BQ83 275 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CCDC68Q9H2F9 335 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 NLE1Q9NVX2 485 aaPredicted RBP14.65□□□□□ -0.06
DDX55-209ENST00000542286 CLEC4EQ9ULY5 219 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 CHD5Q8TDI0 1954 aa14.65□□□□□ -0.06
DDX55-209ENST00000542286 PRSS51A0A1B0GVH4 220 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 SMAD6O43541 496 aaKnown RBP14.64□□□□□ -0.07
DDX55-209ENST00000542286 TBL1XO60907 577 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 MT-ND1P03886 318 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 CR2P20023 1033 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 ATP6V1B2P21281 511 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 PAX3P23760 479 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 DNAJB1P25685 340 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 CA8P35219 290 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 GRIA3P42263 894 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 PIK3CGP48736 1102 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 ALDH7A1P49419 539 aaKnown RBP14.64□□□□□ -0.07
DDX55-209ENST00000542286 ENTPD1P49961 510 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 CDK9P50750 372 aaKnown RBP14.64□□□□□ -0.07
DDX55-209ENST00000542286 TRIM25Q14258 630 aaKnown RBP14.64□□□□□ -0.07
DDX55-209ENST00000542286 TAF12Q16514 161 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 FUT11Q495W5 492 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 SPOUT1Q5T280 376 aaKnown RBP14.64□□□□□ -0.07
DDX55-209ENST00000542286 TXNDC8Q6A555 127 aa14.64□□□□□ -0.07
DDX55-209ENST00000542286 ANKS3Q6ZW76 656 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms