RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TMEM268Q5VZI3 342 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 TMEM65Q6PI78 240 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 Q6ZNX1 250 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 DCDC5Q6ZRR9 648 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 TPRG1Q6ZUI0 275 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 SLC29A4Q7RTT9 530 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 PRSS45Q7RTY3 260 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 ADGRA1Q86SQ6 560 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 LONP2Q86WA8 852 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 WDTC1Q8N5D0 677 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 MOAP1Q96BY2 351 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZNF653Q96CK0 615 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 CCDC17Q96LX7 622 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 GPR78Q96P69 363 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 CLSTN3Q9BQT9 956 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 MRPL1Q9BYD6 325 aaKnown RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 CIPCQ9C0C6 399 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 PRORYQ9H606 182 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZWILCHQ9H900 591 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 FBRSL1Q9HCM7 1045 aaKnown RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 SLC2A4RGQ9NR83 387 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 TLR8Q9NR97 1041 aaKnown RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 PCDHB16Q9NRJ7 776 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 ARGLU1Q9NWB6 273 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 ASNSD1Q9NWL6 643 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 RAI14Q9P0K7 980 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 CEP72Q9P209 647 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 KIAA1456Q9P272 454 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 HDAC6Q9UBN7 1215 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 HAO1Q9UJM8 370 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 NDRG2Q9UN36 371 aaKnown RBP4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 TNFSF13BQ9Y275 285 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 RIPK3Q9Y572 518 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 FLT1P17948 1338 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 FRMPD4Q14CM0 1322 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 PLXNB3Q9ULL4 1909 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 CACNA1FO60840 1977 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 TTC3P53804 2025 aa4.85□□□□□ -1.63
HMGB1P23-201ENST00000518743 NAV1Q8NEY1 1877 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 LOC100509620A0A075B734 347 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 FAM237BA0A1B0GVD1 139 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 LNP1A1A4G5 178 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 CDRT15L2A8MXV6 281 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 USP17L23D6RBM5 183 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 H0YIZ8 118 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 H7C1Q1 480 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 MASP2O00187 686 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 CLIC1O00299 241 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 NDUFS3O75489 264 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 LUC7L3O95232 432 aaKnown RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 SERPINC1P01008 464 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 ADH4P08319 380 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 EBLN1P0CF75 366 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 TDGF1P13385 188 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 APEHP13798 732 aaKnown RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 TMEM11P17152 192 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 PTMSP20962 102 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 GCH1P30793 250 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 ACSL1P33121 698 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 TTKP33981 857 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 PTGER1P34995 402 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 CTNNA1P35221 906 aaKnown RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 HADHAP40939 763 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 RPS9P46781 194 aaKnown RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 CXCL12P48061 93 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 VPS41P49754 854 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 CCT8P50990 548 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZNF84P51523 738 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 CDH8P55286 799 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 KRT83P78385 493 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 MRPS35P82673 323 aaKnown RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 PSG6Q00889 435 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 CYP4A11Q02928 519 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 PTPAQ15257 358 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 MED22Q15528 200 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 TAF11Q15544 211 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 C15orf59Q2T9L4 293 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 C5orf22Q49AR2 442 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 TCP11X2Q5H9J9 407 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 RAB41Q5JT25 222 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 SERTAD4-AS1Q5TG53 156 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZNF852Q6ZMS4 543 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 CACNA2D4Q7Z3S7 1137 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 GRASPQ7Z6J2 395 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 FAM160B2Q86V87 743 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 TERB1Q8NA31 727 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 TFAP2BQ92481 460 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 KAT2BQ92831 832 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 ZNF689Q96CS4 500 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 P2RY11Q96G91 374 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 WWC2-AS2Q96NR7 200 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 MMS19Q96T76 1030 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 EDEM3Q9BZQ6 932 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 RAVER2Q9HCJ3 691 aaKnown RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 C20orf141Q9NUB4 165 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 SPATS2LQ9NUQ6 558 aaKnown RBP4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 ARL8BQ9NVJ2 186 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 TMEM248Q9NWD8 314 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 ARL15Q9NXU5 204 aa4.84□□□□□ -1.63
HMGB1P23-201ENST00000518743 AATFQ9NY61 560 aaKnown RBP eCLIP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms