RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 DPY19L1Q2PZI1 675 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 ZIK1Q3SY52 487 aaPredicted RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 BTLAQ7Z6A9 289 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 ZBTB46Q86UZ6 589 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 LACC1Q8IV20 430 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 FBLIM1Q8WUP2 373 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 TMEM209Q96SK2 561 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 ANKHQ9HCJ1 492 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 COMMD8Q9NX08 183 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 DNAJB9Q9UBS3 223 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 TNS1Q9HBL0 1735 aaKnown RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 NYNRINQ9P2P1 1898 aaKnown RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 ZNF99A8MXY4 864 aaPredicted RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 HHLA1C9JL84 531 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 H3BMM5 538 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 ARNTLO00327 626 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 IFRD1O00458 451 aaPredicted RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 NDUFS2O75306 463 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 USP17L7P0C7H9 530 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 TCF3P15923 654 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 DPEP1P16444 411 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 GRIK1P39086 918 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 GP2P55259 537 aaKnown RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 OR4D2P58180 307 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 CLCQ05315 142 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 CHRNB3Q05901 458 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 GRIK4Q16099 956 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 DGUOKQ16854 277 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 STK32CQ86UX6 486 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 ZMIZ2Q8NF64 920 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 OR52E4Q8NGH9 312 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 GPR150Q8NGU9 434 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 VPS33AQ96AX1 596 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 OTUD5Q96G74 571 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 ZNF599Q96NL3 588 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 NODALQ96S42 347 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 MBOAT4Q96T53 435 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 TRIM62Q9BVG3 475 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 UGT2B28Q9BY64 529 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 SLC39A8Q9C0K1 460 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 GORASP2Q9H8Y8 452 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 RGS18Q9NS28 235 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 THG1LQ9NWX6 298 aaKnown RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 ERVK-11Q9UQG0 969 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 C9JVG2 144 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 G3V2T6 193 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 PPP6CO00743 305 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 MSI1O43347 362 aaKnown RBP17.61■□□□□ 0.41
NUP54-205ENST00000507257 LINC00032P0C843 101 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 IL7RP16871 459 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 ZNF37AP17032 561 aaPredicted RBP17.61■□□□□ 0.41
NUP54-205ENST00000507257 HOXB6P17509 224 aaKnown RBP17.61■□□□□ 0.41
NUP54-205ENST00000507257 GGT1P19440 569 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 RYKP34925 604 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 GSSP48637 474 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 ERVK-8P63133 956 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 ACVR1Q04771 509 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 POLD3Q15054 466 aaPredicted RBP17.61■□□□□ 0.41
NUP54-205ENST00000507257 KCNJ8Q15842 424 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 BRMS1LQ5PSV4 323 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 GPRIN1Q7Z2K8 1008 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 SLCO6A1Q86UG4 719 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 TAC4Q86UU9 113 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 ZFAND4Q86XD8 727 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.61■□□□□ 0.41
NUP54-205ENST00000507257 TMEM74Q96NL1 305 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 RBM4BQ9BQ04 359 aaKnown RBP17.61■□□□□ 0.41
NUP54-205ENST00000507257 RBM4Q9BWF3 364 aaKnown RBP17.61■□□□□ 0.41
NUP54-205ENST00000507257 CPNE5Q9HCH3 593 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 CRTAC1Q9NQ79 661 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 SUN2Q9UH99 717 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 ANKRD36A6QL64 1941 aa17.61■□□□□ 0.41
NUP54-205ENST00000507257 M0QX08 132 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 KERAO60938 352 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 SIX3O95343 332 aaPredicted RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 RPS17P08708 135 aaKnown RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 IFITM3Q01628 133 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 SOX4Q06945 474 aaPredicted RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 MAPRE1Q15691 268 aaKnown RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 ZC3H12BQ5HYM0 836 aaKnown RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 SULT1C3Q6IMI6 304 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 PRSS48Q7RTY5 328 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 DTWD1Q8N5C7 304 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 OR7A2PQ8NGA2 310 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 OR6Q1Q8NGQ2 317 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 ITFG1Q8TB96 612 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 IMP4Q96G21 291 aaKnown RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 TEX37Q96LM6 180 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 KCNA7Q96RP8 456 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 TRIM8Q9BZR9 551 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 R3HDMLQ9H3Y0 253 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 SP140LQ9H930 580 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 INTS7Q9NVH2 962 aaKnown RBP17.6■□□□□ 0.41
NUP54-205ENST00000507257 SMPD4Q9NXE4 827 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 ST14Q9Y5Y6 855 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 DGKBQ9Y6T7 804 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 FAM92AA1XBS5 289 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 ISPDA4D126 451 aa17.6■□□□□ 0.41
NUP54-205ENST00000507257 SLC16A6O15403 523 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms