RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 HM13Q8TCT9 377 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 TAS1R2Q8TE23 839 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 FCAMRQ8WWV6 532 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 OXNAD1Q96HP4 312 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 GFRA4Q9GZZ7 299 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 TCP11L1Q9NUJ3 509 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 FAM118AQ9NWS6 357 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 B3GALT5Q9Y2C3 310 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 R3HDM2Q9Y2K5 976 aaKnown RBP3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 FAM237BA0A1B0GVD1 139 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 PLPP2O43688 288 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 SYNCRIPO60506 623 aaKnown RBP3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 CIDEAO60543 219 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 IPO7O95373 1038 aaKnown RBP3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 TUBBP07437 444 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 GM2AP17900 193 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 TERF1P54274 439 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 RPS3AP61247 264 aaKnown RBP3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 TUBB4BP68371 445 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 GAGE5Q13069 117 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 GAGE6Q13070 117 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 PDE1CQ14123 709 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 MED22Q15528 200 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 ZNF876PQ49A33 203 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 SLC35E4Q6ICL7 350 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 PLXDC2Q6UX71 529 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 KRTAP7-1Q8IUC3 87 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 EXOC8Q8IYI6 725 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 STPG4Q8N801 248 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 WDSUB1Q8N9V3 476 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 IL17REQ8NFR9 667 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 TM9SF4Q92544 642 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 WBP2Q969T9 261 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 FAM149B1Q96BN6 582 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 STAMBPL1Q96FJ0 436 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 SCRN2Q96FV2 425 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 TBATAQ96M53 351 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 MAP7D2Q96T17 732 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 SEC62Q99442 399 aaKnown RBP3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 FSD1Q9BTV5 496 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 RBM4Q9BWF3 364 aaKnown RBP3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 PDZD7Q9H5P4 517 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 SLC52A3Q9NQ40 469 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 ZNF624Q9P2J8 865 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 GTF2A1LQ9UNN4 478 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 KCNE2Q9Y6J6 123 aa3.19□□□□□ -1.9
HMGB1P29-201ENST00000505659 SLC25A12O75746 678 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 RTN3O95197 1032 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 SERPINB2P05120 415 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 CLEC3BP05452 202 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 KRT19P08727 400 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 CSF2RAP15509 400 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 MCCP23508 829 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 NR2F2P24468 414 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 TAS2R40P59535 323 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 CD81P60033 236 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 G3BP1Q13283 466 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 TMEM30BQ3MIR4 351 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 TECRLQ5HYJ1 363 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 CCNYL2Q5T2Q4 361 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 SFMBT2Q5VUG0 894 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 SLC27A1Q6PCB7 646 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 C15orf39Q6ZRI6 1047 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 CLEC17AQ6ZS10 378 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 PM20D2Q8IYS1 436 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 GBGT1Q8N5D6 347 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 FRMD1Q8N878 549 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 CNBD1Q8NA66 436 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 ETNPPLQ8TBG4 499 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 SENP5Q96HI0 755 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 C17orf77Q96MU5 243 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 SEMA3CQ99985 751 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 JMJD4Q9H9V9 463 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 MTMR10Q9NXD2 777 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 PTTG2Q9NZH5 202 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 CWC15Q9P013 229 aaKnown RBP3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 LIMA1Q9UHB6 759 aaKnown RBP3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 PIAS3Q9Y6X2 628 aa3.18□□□□□ -1.9
HMGB1P29-201ENST00000505659 SMIM1B2RUZ4 78 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 BLOC1S5-TXNDC5H3BN57 136 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 TBX18O95935 607 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 INHBAP08476 426 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 CD48P09326 243 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 ZNF883P0CG24 379 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 MSH3P20585 1137 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 BSGP35613 385 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 PRCPP42785 496 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 MRPS34P82930 218 aaKnown RBP3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 ACVR2BQ13705 512 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 FCN2Q15485 313 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 RAB6CQ53S08 254 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 TMEM198Q66K66 360 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 RBMS3Q6XE24 437 aaKnown RBP3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 PLEKHM3Q6ZWE6 761 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 CPLX4Q7Z7G2 160 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 TRPT1Q86TN4 253 aaKnown RBP3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 CCDC190Q86UF4 302 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 ZNF843Q8N446 348 aa3.17□□□□□ -1.9
HMGB1P29-201ENST00000505659 PCYOX1LQ8NBM8 494 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms