RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SYNDIG1Q9H7V2 258 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 MYOCOSA0A1B0GUC4 107 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 FAM159BA6NKW6 160 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 TYROBPO43914 113 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 UGT1A6P19224 532 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 UGT1A1P22309 533 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 UGT1A4P22310 534 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 IGFBP6P24592 240 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 UGT1A3P35503 534 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 UGT1A5P35504 534 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 HCAR3P49019 387 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 SGCGQ13326 291 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 TSNQ15631 228 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 RBM20Q5T481 1227 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 TRIM48Q8IWZ4 208 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CMTM8Q8IZV2 173 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 BPIFB6Q8NFQ5 453 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 OSCP1Q8WVF1 389 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 HPS1Q92902 700 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 COX4I2Q96KJ9 171 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 TCF12Q99081 682 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 RERGLQ9H628 205 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 STK39Q9UEW8 545 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 GJD2Q9UKL4 321 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 TMEM114B3SHH9 223 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 DLDP09622 509 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 GPR1P46091 355 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CDH15P55291 814 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 RPL38P63173 70 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 BRSK1Q8TDC3 778 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 SH3RF2Q8TEC5 729 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 LPGAT1Q92604 370 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 FAM120BQ96EK7 910 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 MOCOSQ96EN8 888 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 SLC2A13Q96QE2 648 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 OSBPL6Q9BZF3 934 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CXorf21Q9HAI6 301 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CAB39Q9Y376 341 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 GLYATL1P3A0A0U1RQE8 302 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 OR2AG2A6NM03 316 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 TAF4O00268 1085 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 IFRD1O00458 451 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 PER2O15055 1255 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 LSM1O15116 133 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 HS6ST1O60243 411 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 MT-ND1P03886 318 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 HSMCR30P0CW71 290 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 T-ENOLP0DO92 83 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 GM2AP17900 193 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 RUNX1T1Q06455 604 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 SIRPB2Q5JXA9 342 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CLLU1OSQ5K130 101 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CRTC3Q6UUV7 619 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CDHR3Q6ZTQ4 885 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 RPS27LQ71UM5 84 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 RBFAQ8N0V3 343 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 SFRP1Q8N474 314 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 ZMIZ2Q8NF64 920 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 MAGED4Q96JG8 741 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 ABCB10Q9NRK6 738 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 FAM32AQ9Y421 112 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 RREB1Q92766 1687 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 DHRS12A0PJE2 317 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CATP04040 527 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 NTRK1P04629 796 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 ALOX12P18054 663 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 HNF4AP41235 474 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CREMQ03060 361 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 VAC14Q08AM6 782 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 ZBTB6Q15916 424 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 TMEM198Q66K66 360 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CHST9Q7L1S5 443 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 ADAMTSL2Q86TH1 951 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 ZNF598Q86UK7 904 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 PIM3Q86V86 326 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 C11orf74Q86VG3 221 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 HORMAD1Q86X24 394 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 ZDHHC13Q8IUH4 622 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 CLYBLQ8N0X4 340 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 OR8H2Q8N162 312 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 IGSF8Q969P0 613 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 REXO4Q9GZR2 422 aaKnown RBP11.23□□□□□ -0.61
SMPD4-218ENST00000482171 COQ10BQ9H8M1 238 aa11.23□□□□□ -0.61
SMPD4-218ENST00000482171 ULK1O75385 1050 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ELFN1P0C7U0 828 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 MAGP20916 626 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 GPC1P35052 558 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 RFX3P48380 749 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 KIAA0930Q6ICG6 404 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 MSANTD2Q6P1R3 559 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 RRM2BQ7LG56 351 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 PDSS2Q86YH6 399 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 OFCC1Q8IZS5 231 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 OR7A2PQ8NGA2 310 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 RDH11Q8TC12 318 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms