RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ALDH18A1P54886 795 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SLC26A5P58743 744 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TNNC1P63316 161 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 NOP14P78316 857 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 MYL7Q01449 175 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ZP2Q05996 745 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 HSPA14Q0VDF9 509 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TWF1Q12792 350 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SMU1Q2TAY7 513 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 BTBD16Q32M84 506 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PDCD4Q53EL6 469 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF667Q5HYK9 610 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 MDH1BQ5I0G3 518 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 FAXCQ5TGI0 409 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SDHAF4Q5VUM1 108 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 KRT39Q6A163 491 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 KLC3Q6P597 504 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TRAT1Q6PIZ9 186 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 FAM83HQ6ZRV2 1179 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 KIAA0408Q6ZU52 694 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SYT13Q7L8C5 426 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 GRASPQ7Z6J2 395 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 HOOK3Q86VS8 718 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 GPR65Q8IYL9 337 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 WDTC1Q8N5D0 677 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TOP6BLQ8N6T0 577 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 DCBLD1Q8N8Z6 715 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 POMGNT2Q8NAT1 580 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TDRD5Q8NAT2 981 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 MLKLQ8NB16 471 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 NFKBIDQ8NI38 313 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF461Q8TAF7 563 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 UHMK1Q8TAS1 419 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 AENQ8WTP8 325 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TMEM174Q8WUU8 243 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 WDR60Q8WVS4 1066 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ASB15Q8WXK1 588 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ING5Q8WYH8 240 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SHC3Q92529 594 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 MYLPFQ96A32 169 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 FAM136AQ96C01 138 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 FOXRED1Q96CU9 486 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 RMDN1Q96DB5 314 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TCTN2Q96GX1 697 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SNF8Q96H20 258 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 CNDP1Q96KN2 507 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 CNOT6LQ96LI5 555 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PTCHD1Q96NR3 888 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 CATSPER2Q96P56 530 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 WDR24Q96S15 920 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 CCT8L2Q96SF2 557 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 UHRF1Q96T88 793 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SEPT5Q99719 369 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SYT15Q9BQS2 421 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF518BQ9C0D4 1074 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 VCXQ9H320 206 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 MID1IP1Q9NPA3 183 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 HEYLQ9NQ87 328 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SNX15Q9NRS6 342 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 GDAP2Q9NXN4 497 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 DDX43Q9NXZ2 648 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SELENONQ9NZV5 590 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 RWDD2AQ9UIY3 292 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 RPL26L1Q9UNX3 145 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SLC12A4Q9UP95 1085 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PRELID1Q9Y255 219 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 KLHL20Q9Y2M5 609 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PPP2R2CQ9Y2T4 447 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 NFE2L3Q9Y4A8 694 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 YIPF1Q9Y548 306 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 INSL5Q9Y5Q6 135 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TRIOO75962 3097 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 CLUHO75153 1309 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 C2orf16Q68DN1 1984 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 A0A0A0MRY4 1105 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 A0A0B4J203 849 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ARHGEF37A1IGU5 675 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MBD3L4A6NDZ8 208 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MBD3L3A6NE82 208 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FAM90A27PA6NNH2 459 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 TMEM233B4DJY2 109 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 K7EPI3 171 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CLDN5O00501 218 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 TM4SF5O14894 197 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 IKBKBO14920 756 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FGF10O15520 208 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 IDH3BO43837 385 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 NPHS1O60500 1241 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 DIAPH2O60879 1101 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 SMPD2O60906 423 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 LILRB5O75023 590 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ABHD16AO95870 558 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FTCDO95954 541 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PRLP01236 227 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CALCAP01258 141 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 LRG1P02750 347 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PIM1P11309 404 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ADH5P11766 374 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CCDC130P13994 396 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 GJA1P17302 382 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms