RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 FEM1AQ9BSK4 669 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 USP29Q9HBJ7 922 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SAC3D1A6NKF1 404 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 FGFR3P22607 806 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SH3BGRP55822 239 aaPredicted RBP13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 GPX6P59796 221 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 TIGD2Q4W5G0 525 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 BRAT1Q6PJG6 821 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 ZBTB49Q6ZSB9 765 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SCD5Q86SK9 330 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 TLCD1Q96CP7 247 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 IMPAD1Q9NX62 359 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SLCO3A1Q9UIG8 710 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 PRR5-ARHGAP8B1AHC4 643 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 EPN2O95208 641 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 GSTM1P09488 218 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 KCNA5P22460 613 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 POLD2P49005 469 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 IRX1P78414 480 aaPredicted RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 ARHGAP8P85298 464 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 RNF43Q68DV7 783 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 UMODL1-AS1Q8N2C9 162 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 SIGLEC10Q96LC7 697 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 DACH2Q96NX9 599 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 CORO1CQ9ULV4 474 aaPredicted RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 RGSL1A5PLK6 1076 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 DCLK1O15075 740 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 ADAM12O43184 909 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 AHSGP02765 367 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 HNRNPA1P09651 372 aaKnown RBP eCLIP13□□□□□ -0.33
PTPRN2-202ENST00000389416 UBTFL6P0CB48 400 aaPredicted RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 NAA20P61599 178 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 IRF9Q00978 393 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 DSG1Q02413 1049 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 KLC1Q07866 573 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 LMAN2Q12907 356 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 WLSQ5T9L3 541 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 ZNF655Q8N720 491 aaPredicted RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 VPS33AQ96AX1 596 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 RCN3Q96D15 328 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 HERC2P3Q9BVR0 1158 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 SGK2Q9HBY8 427 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 CD248Q9HCU0 757 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 FBXL12Q9NXK8 326 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 EIF2B4Q9UI10 523 aaKnown RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 SORCS3Q9UPU3 1222 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 UNC5CO95185 931 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 CLCQ05315 142 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 SQLEQ14534 574 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 PRMT9Q6P2P2 845 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 BANPQ8N9N5 519 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 ATG16L2Q8NAA4 619 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 SORCS1Q8WY21 1168 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 NMUR2Q9GZQ4 415 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 ZNF490Q9ULM2 529 aaPredicted RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 C15orf38-AP3S2A0A0A6YYH1 394 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 SLC28A1O00337 649 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 MMP20O60882 483 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 RB1P06400 928 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 EPORP19235 508 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 TLX1P31314 330 aaPredicted RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 ZNF33AQ06730 810 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 ITPRIPL2Q3MIP1 535 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 ARPINQ7Z6K5 226 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 GPR180Q86V85 440 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 NPWQ8N729 165 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 RERGQ96A58 199 aaPredicted RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 ATAD3AQ9NVI7 634 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 DZANK1Q9NVP4 752 aa13□□□□□ -0.33
PTPRN2-202ENST00000389416 INTS10Q9NVR2 710 aaKnown RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 H2AFY2Q9P0M6 372 aaPredicted RBP13□□□□□ -0.33
PTPRN2-202ENST00000389416 GRXCR1A8MXD5 290 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 ABLIM1O14639 778 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 FKBP6O75344 327 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 HOXB2P14652 356 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 CRATP43155 626 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 SLC16A1P53985 500 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 MRPS22P82650 360 aaKnown RBP12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 LRRC66Q68CR7 880 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 ZYG11AQ6WRX3 759 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 GCNT7Q6ZNI0 430 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 TPRG1Q6ZUI0 275 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 PAGE2Q7Z2X7 111 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 IGDCC3Q8IVU1 814 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 STARD8Q92502 1023 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 TSGA13Q96PP4 275 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 SFXN1Q9H9B4 322 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 HCFC1R1Q9NWW0 138 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 ELOVL2Q9NXB9 296 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 POLR3HQ9Y535 204 aaPredicted RBP12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 HEPACAM2A8MVW5 462 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 TRAFD1O14545 582 aaPredicted RBP12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 IFNA16P05015 189 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 KRT20P35900 424 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 FAM98BQ52LJ0 330 aaKnown RBP12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 Q6ZVL8 140 aa12.99□□□□□ -0.33
PTPRN2-202ENST00000389416 TSTD1Q8NFU3 115 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms