RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 KCTD14Q9BQ13 255 aaPredicted RBP17.8■□□□□ 0.44
TRIM50-201ENST00000333149 SEZ6LQ9BYH1 1024 aa17.8■□□□□ 0.44
TRIM50-201ENST00000333149 PLGRKTQ9HBL7 147 aa17.8■□□□□ 0.44
TRIM50-201ENST00000333149 SEMA4BQ9NPR2 832 aaPredicted RBP17.8■□□□□ 0.44
TRIM50-201ENST00000333149 OLA1Q9NTK5 396 aaKnown RBP17.8■□□□□ 0.44
TRIM50-201ENST00000333149 ZNF225Q9UK10 706 aa17.8■□□□□ 0.44
TRIM50-201ENST00000333149 FADS3Q9Y5Q0 445 aa17.8■□□□□ 0.44
TRIM50-201ENST00000333149 ZFC3H1O60293 1989 aaKnown RBP17.8■□□□□ 0.44
TRIM50-201ENST00000333149 TPST1O60507 370 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 SLC22A3O75751 556 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 SOAT2O75908 522 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 SERPINF2P08697 491 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 VEGFBP49765 207 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 ADARB1P78563 741 aaKnown RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 SP3Q02447 781 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 EMX2Q04743 252 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 GALNT3Q14435 633 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 RABL3Q5HYI8 236 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 SDHAF4Q5VUM1 108 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 PRR23BQ6ZRT6 265 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 SYVN1Q86TM6 617 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 NKAPQ8N5F7 415 aaKnown RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 DNAJB14Q8TBM8 379 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 ISG20Q96AZ6 181 aaKnown RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 CNDP2Q96KP4 475 aaKnown RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 EBF1Q9UH73 591 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 PCTPQ9UKL6 214 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 GABRQQ9UN88 632 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 TIMM22Q9Y584 194 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 EI24O14681 340 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 ENO2P09104 434 aaPredicted RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 MTHFD1P11586 935 aaKnown RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 DCKP27707 260 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 OR1E1P30953 314 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 RPS9P46781 194 aaKnown RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 GPR15P49685 360 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 ERVK-8P63133 956 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 ECT2LQ008S8 904 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 RING1Q06587 406 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 ZNF235Q14590 738 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 TSNQ15631 228 aaKnown RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 NANOGP8Q6NSW7 305 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 DPP10Q8N608 796 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 TERB1Q8NA31 727 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 VPS33AQ96AX1 596 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 RPRD1AQ96P16 312 aaPredicted RBP17.79■□□□□ 0.44
TRIM50-201ENST00000333149 MGME1Q9BQP7 344 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 CFHR5Q9BXR6 569 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 NANOGQ9H9S0 305 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 CXorf21Q9HAI6 301 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
TRIM50-201ENST00000333149 CHD5Q8TDI0 1954 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 FAM234BA2RU67 622 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 CCDC154A6NI56 674 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 H0YAE9 185 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 CRCPO75575 148 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 CHEK2O96017 543 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 LDLRP01130 860 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 VARSP26640 1264 aaKnown RBP17.78■□□□□ 0.44
TRIM50-201ENST00000333149 FLT3LGP49771 235 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 POLR2JP52435 117 aaKnown RBP17.78■□□□□ 0.44
TRIM50-201ENST00000333149 UFM1P61960 85 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 CACNB2Q08289 660 aaPredicted RBP17.78■□□□□ 0.44
TRIM50-201ENST00000333149 MTA1Q13330 715 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 C5orf22Q49AR2 442 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 KLHL35Q6PF15 583 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 AFTPHQ6ULP2 937 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 TRPV1Q8NER1 839 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 FNDC8Q8TC99 324 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 BPIFB1Q8TDL5 484 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 OSCP1Q8WVF1 389 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 SLC30A3Q99726 388 aa17.78■□□□□ 0.44
TRIM50-201ENST00000333149 CDC7O00311 574 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 SNX2O60749 519 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 PFDN1O60925 122 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 TBX18O95935 607 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 PRDX3P30048 256 aaKnown RBP17.77■□□□□ 0.44
TRIM50-201ENST00000333149 FMO4P31512 558 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 THPOP40225 353 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 GALK1P51570 392 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 CAP1Q01518 475 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 DSC1Q08554 894 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 RIMKLAQ8IXN7 391 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 PNPT1Q8TCS8 783 aaKnown RBP17.77■□□□□ 0.44
TRIM50-201ENST00000333149 CYGBQ8WWM9 190 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 BIRC7Q96CA5 298 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 FBXL20Q96IG2 436 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 TUBA1CQ9BQE3 449 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 RPF2Q9H7B2 306 aaKnown RBP17.77■□□□□ 0.44
TRIM50-201ENST00000333149 MARCH2Q9P0N8 246 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 FAM50BQ9Y247 325 aa17.77■□□□□ 0.44
TRIM50-201ENST00000333149 HEMK1Q9Y5R4 338 aaPredicted RBP17.77■□□□□ 0.44
TRIM50-201ENST00000333149 UBA6A0AVT1 1052 aaPredicted RBP17.77■□□□□ 0.43
TRIM50-201ENST00000333149 SH3PXD2BA1X283 911 aa17.77■□□□□ 0.43
TRIM50-201ENST00000333149 TSPAN12O95859 305 aa17.77■□□□□ 0.43
TRIM50-201ENST00000333149 C1RP00736 705 aa17.77■□□□□ 0.43
TRIM50-201ENST00000333149 PRSS56P0CW18 603 aa17.77■□□□□ 0.43
TRIM50-201ENST00000333149 HRH2P25021 359 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms