RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SFRP1Q8N474 314 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 PDLIM2Q96JY6 352 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 FOXP3Q9BZS1 431 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 TBC1D29Q9UFV1 150 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 TMPRSS11EQ9UL52 423 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 ATXN7L1Q9ULK2 861 aaPredicted RBP27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 PPP2R2CQ9Y2T4 447 aa27.28■■□□□ 1.96
ATPAF1-201ENST00000329231 A0A087WV48 116 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 KMOO15229 486 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 PPM1DO15297 605 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 MTX2O75431 263 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 CRTAMO95727 393 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 RBMS1P29558 406 aaKnown RBP27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 STIP1P31948 543 aaKnown RBP27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 CCKBRP32239 447 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 FASLGP48023 281 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 GDF10P55107 478 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 ERVPABLB-1P60509 514 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 PDE1BQ01064 536 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 EIF3IQ13347 325 aaKnown RBP27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 GTF2H3Q13889 308 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 GSE1Q14687 1217 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 CLPPQ16740 277 aaPredicted RBP27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 AMZ1Q400G9 498 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 IGF2-ASQ6U949 168 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 CRTC3Q6UUV7 619 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 SLC37A2Q8TED4 501 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 ATG4AQ8WYN0 398 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 TTC25Q96NG3 672 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 DCBLD2Q96PD2 775 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 ZCCHC2Q9C0B9 1178 aaKnown RBP27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 ARNT2Q9HBZ2 717 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 EPB41L5Q9HCM4 733 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 KLC4Q9NSK0 619 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 SCN8AQ9UQD0 1980 aa27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 ANKRD11Q6UB99 2663 aaPredicted RBP27.27■■□□□ 1.96
ATPAF1-201ENST00000329231 TRBV23OR9-2A0A075B6M9 112 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 A0A1W2PNU3 283 aaPredicted RBP27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 RRP8O43159 456 aaKnown RBP27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 SNX2O60749 519 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 CPNE6O95741 557 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 EIF2S3P41091 472 aaKnown RBP27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 TMEM115Q12893 351 aaPredicted RBP27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 SPARCL1Q14515 664 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 INSCQ1MX18 579 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 MAP9Q49MG5 647 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 KHDC1Q4VXA5 237 aaKnown RBP27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 LDLRAP1Q5SW96 308 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 IYDQ6PHW0 289 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 PIM3Q86V86 326 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 TRIM58Q8NG06 486 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 STN1Q9H668 368 aaKnown RBP27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 LRRC40Q9H9A6 602 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 THSD1Q9NS62 852 aa27.26■■□□□ 1.95
ATPAF1-201ENST00000329231 OR5K4A6NMS3 321 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 PSMD3O43242 534 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 LIASO43766 372 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A9O60656 530 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 METTL18O95568 372 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 EML2O95834 649 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 F3P13726 295 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 ZNF7P17097 686 aaPredicted RBP27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A6P19224 532 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A1P22309 533 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A4P22310 534 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A3P35503 534 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A5P35504 534 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 ZFP36L1Q07352 338 aaKnown RBP27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 KCTD11Q693B1 232 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 DENND5AQ6IQ26 1287 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 FOXR1Q6PIV2 292 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 LRRC69Q6ZNQ3 347 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 OR4K2Q8NGD2 314 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 RTP4Q96DX8 246 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 SLC46A1Q96NT5 459 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 TIMM29Q9BSF4 260 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 OSGEPL1Q9H4B0 414 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A7Q9HAW7 530 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A10Q9HAW8 530 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 UGT1A8Q9HAW9 530 aa27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 SARS2Q9NP81 518 aaKnown RBP27.25■■□□□ 1.95
ATPAF1-201ENST00000329231 ZZEF1O43149 2961 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 UNC13CQ8NB66 2214 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 KIR2DS5A0A0G2JLQ3 304 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 A0A0G2JNG1 304 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 A6NCN8 305 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 KIR2DS3K7RE56 304 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 GAPDHSO14556 408 aaPredicted RBP27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 MLLT3P42568 568 aaPredicted RBP27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 MSLNQ13421 630 aaPredicted RBP27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 PTPRCAPQ14761 206 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 KIR2DS5Q14953 304 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 SLC9B2Q86UD5 537 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 AVL9Q8NBF6 648 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 DDHD1Q8NEL9 900 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 ZNF398Q8TD17 642 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 SLC38A3Q99624 504 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 C19orf43Q9BQ61 176 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 ASCL3Q9NQ33 180 aa27.24■■□□□ 1.95
ATPAF1-201ENST00000329231 SMOXQ9NWM0 555 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms