RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ARL14Q8N4G2 192 aa17.74■□□□□ 0.43
SNRPA1-201ENST00000254193 DNAJC1Q96KC8 554 aaKnown RBP17.74■□□□□ 0.43
SNRPA1-201ENST00000254193 OSBPL9Q96SU4 736 aa17.74■□□□□ 0.43
SNRPA1-201ENST00000254193 AP1M1Q9BXS5 423 aa17.74■□□□□ 0.43
SNRPA1-201ENST00000254193 HOMER3Q9NSC5 361 aa17.74■□□□□ 0.43
SNRPA1-201ENST00000254193 TBC1D29Q9UFV1 150 aa17.74■□□□□ 0.43
SNRPA1-201ENST00000254193 SLC23A2Q9UGH3 650 aa17.74■□□□□ 0.43
SNRPA1-201ENST00000254193 GPR89AB7ZAQ6 455 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 SNX2O60749 519 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 CSO75390 466 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 SRP72O76094 671 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 SUN1O94901 812 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 APRTP07741 180 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 GPR89BP0CG08 455 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 MSNP26038 577 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 CCL7P80098 99 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 PEX6Q13608 980 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 ITGA9Q13797 1035 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 PLA2G4EQ3MJ16 856 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 PPP1R21Q6ZMI0 780 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 ZNF547Q8IVP9 402 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 CACTIN-AS1Q8N1I8 211 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 DNAAF3Q8N9W5 541 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 DDHD1Q8NEL9 900 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 TTC25Q96NG3 672 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 ASB8Q9H765 288 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 KLC4Q9NSK0 619 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 APPL1Q9UKG1 709 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 TTC7AQ9ULT0 858 aaPredicted RBP17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 SNX12Q9UMY4 172 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 PCDHB1Q9Y5F3 818 aa17.73■□□□□ 0.43
SNRPA1-201ENST00000254193 GOLGA4Q13439 2230 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 CCDC78A2IDD5 438 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 ZNF185O15231 689 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 NUDT21O43809 227 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 RPLP0P05388 317 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 ZNF7P17097 686 aaPredicted RBP17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 CTSCP53634 463 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 NFATC2Q13469 925 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 BIRC2Q13490 618 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 GTF2H3Q13889 308 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 TRIP13Q15645 432 aaPredicted RBP17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 INSCQ1MX18 579 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 CCDC38Q502W7 563 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 LDLRAP1Q5SW96 308 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 TTC27Q6P3X3 843 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 RBM44Q6ZP01 1051 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 LRRTM4Q86VH4 590 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 TRAPPC5Q8IUR0 188 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 CCNJLQ8IV13 435 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 RASGEF1AQ8N9B8 481 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 MDM1Q8TC05 714 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 MAGOHBQ96A72 148 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 DEPDC7Q96QD5 511 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 OSGEPL1Q9H4B0 414 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 FAM96AQ9H5X1 160 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 SMOXQ9NWM0 555 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 DNAJC16Q9Y2G8 782 aa17.72■□□□□ 0.43
SNRPA1-201ENST00000254193 A0A1W2PQM1 296 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 RHPN2P1A8MT19 583 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 PGRMC1O00264 195 aaKnown RBP17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 NTN3O00634 580 aaPredicted RBP17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 KMOO15229 486 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 PPM1DO15297 605 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 B4GAT1O43505 415 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 CAPNS1P04632 268 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 HADHAP40939 763 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 GNG11P61952 73 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 CYP4F3Q08477 520 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 CDH17Q12864 832 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 SPIDRQ14159 915 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 ISXQ2M1V0 245 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 SPRED1Q7Z699 444 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 KDF1Q8NAX2 398 aaPredicted RBP17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 WDR48Q8TAF3 677 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 SLC37A2Q8TED4 501 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 NAT14Q8WUY8 206 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 ZCCHC14Q8WYQ9 949 aaKnown RBP17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 ZCCHC2Q9C0B9 1178 aaKnown RBP17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 LRRN3Q9H3W5 708 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 CASS4Q9NQ75 786 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 PRDM8Q9NQV8 689 aa17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 NLE1Q9NVX2 485 aaPredicted RBP17.71■□□□□ 0.43
SNRPA1-201ENST00000254193 LRP4O75096 1905 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 A6NCN8 305 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 TCEA3O75764 348 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 GAS8O95995 478 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 PNLIPP16233 465 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 MSH3P20585 1137 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 ITGALP20701 1170 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 ALDH4A1P30038 563 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 AKT1P31749 480 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 MC4RP32245 332 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 VPS41P49754 854 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 CLCNKAP51800 687 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 TERF1P54274 439 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 OR1D5P58170 312 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 BASP1P80723 227 aaKnown RBP17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 B4GALNT1Q00973 533 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 CCDC173Q0VFZ6 552 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms