RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CLCN7P51798 805 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 RFLNAQ6ZTI6 216 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 HSD11B1LQ7Z5J1 315 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 SUGP1Q8IWZ8 645 aaKnown RBP17.97■□□□□ 0.47
VIM-201ENST00000224237 CSGALNACT1Q8TDX6 532 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 KIAA1191Q96A73 305 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 RASSF4Q9H2L5 321 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 FBRSL1Q9HCM7 1045 aaKnown RBP17.97■□□□□ 0.47
VIM-201ENST00000224237 GALPQ9UBC7 116 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 HCN2Q9UL51 889 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 TICRRQ7Z2Z1 1910 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 CCDC189A1A4V9 331 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 GRXCR2A6NFK2 248 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 H0Y858 1186 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 NPHS1O60500 1241 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 SMIM24O75264 130 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 EPHX1P07099 455 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 ELFN1P0C7U0 828 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 IL2P60568 153 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 NFKB2Q00653 900 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 ELP6Q0PNE2 266 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 EGFLAMQ63HQ2 1017 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 MACC1Q6ZN28 852 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 ATG14Q6ZNE5 492 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 RAVER1Q8IY67 606 aaKnown RBP17.97■□□□□ 0.47
VIM-201ENST00000224237 GIMAP7Q8NHV1 300 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 STAG3L4Q8TBR4 150 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 CCDC97Q96F63 343 aaPredicted RBP17.97■□□□□ 0.47
VIM-201ENST00000224237 FAM129BQ96TA1 746 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 COPS8Q99627 209 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 SLC30A3Q99726 388 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 SPATA16Q9BXB7 569 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 FAM83DQ9H4H8 585 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 SMOXQ9NWM0 555 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 CD84Q9UIB8 345 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 DHRS7Q9Y394 339 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 PLXNA2O75051 1894 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 PLXNB3Q9ULL4 1909 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 NEMP2A6NFY4 417 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 IQCF5A8MTL0 148 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 C1QTNF3-AMACRE9PGA6 284 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 METAP1P53582 386 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 AQP5P55064 265 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 LACTB2Q53H82 288 aaPredicted RBP17.96■□□□□ 0.47
VIM-201ENST00000224237 FBXL19Q6PCT2 694 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 TRIM67Q6ZTA4 783 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 ACOX2Q99424 681 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 WWP1Q9H0M0 922 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 STN1Q9H668 368 aaKnown RBP17.96■□□□□ 0.47
VIM-201ENST00000224237 SARS2Q9NP81 518 aaKnown RBP17.96■□□□□ 0.47
VIM-201ENST00000224237 DYRK4Q9NR20 520 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 CACNA2D2Q9NY47 1150 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 RAP2CQ9Y3L5 183 aa17.96■□□□□ 0.47
VIM-201ENST00000224237 IGLV3-16A0A075B6K0 115 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 NPC1O15118 1278 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 KERAO60938 352 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 TSPAN12O95859 305 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 TPBGLP0DKB5 382 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 HNRNPLP14866 589 aaKnown RBP eCLIP17.95■□□□□ 0.46
VIM-201ENST00000224237 KCNA5P22460 613 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ETV3P41162 512 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 OR4D1Q15615 310 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 CCDC85BQ15834 202 aaPredicted RBP17.95■□□□□ 0.46
VIM-201ENST00000224237 AAK1Q2M2I8 961 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 CFAP157Q5JU67 520 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 LIPIQ6XZB0 460 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 Q6ZVL8 140 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 CPNE9Q8IYJ1 553 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 TRAM1L1Q8N609 369 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 CLDN19Q8N6F1 224 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ZNF781Q8N8C0 355 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ARRDC3Q96B67 414 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ERP27Q96DN0 273 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 LINGO1Q96FE5 620 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 TMEM237Q96Q45 408 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ATOH8Q96SQ7 321 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 P2RY13Q9BPV8 354 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ZSCAN5AQ9BUG6 496 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ILKAPQ9H0C8 392 aaPredicted RBP17.95■□□□□ 0.46
VIM-201ENST00000224237 PRSS16Q9NQE7 514 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 PRSS21Q9Y6M0 314 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 A0A1W2PPC1 479 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 SYCE1LA8MT33 242 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 HGSO14964 777 aaPredicted RBP17.95■□□□□ 0.46
VIM-201ENST00000224237 KCNC1P48547 511 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 HK2P52789 917 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 PRKAA1Q13131 559 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ENPP2Q13822 863 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 ARL13AQ5H913 290 aaPredicted RBP17.95■□□□□ 0.46
VIM-201ENST00000224237 HENMT1Q5T8I9 393 aaKnown RBP17.95■□□□□ 0.46
VIM-201ENST00000224237 TECPR1Q7Z6L1 1165 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 CCNYL1Q8N7R7 359 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 INPP5DQ92835 1189 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 PHF21BQ96EK2 531 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 CNDP1Q96KN2 507 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 CYP4F12Q9HCS2 524 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 PNPOQ9NVS9 261 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 HAO1Q9UJM8 370 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 RNF112Q9ULX5 631 aa17.95■□□□□ 0.46
VIM-201ENST00000224237 UBOX5O94941 541 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms