RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 D6RAR5 112 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 B4GAT1O43505 415 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 ANXA9O76027 345 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 SLC25A14O95258 325 aaPredicted RBP22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 EML2O95834 649 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 NR1D2Q14995 579 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 CHST15Q7LFX5 561 aaPredicted RBP22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 ADGRG6Q86SQ4 1221 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 BLOC1S5Q8TDH9 187 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 PRR11Q96HE9 360 aaPredicted RBP22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 FSD1LQ9BXM9 530 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 OR2AG1Q9H205 316 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 POLR1BQ9H9Y6 1135 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 TRIM39Q9HCM9 518 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 HACD3Q9P035 362 aa22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 ATXN7L1Q9ULK2 861 aaPredicted RBP22.09■■□□□ 1.13
GTF2F1-204ENST00000594965 PPM1DO15297 605 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 GRID2O43424 1007 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 KRT86O43790 486 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 DXOO77932 396 aaKnown RBP22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 MSLNQ13421 630 aaPredicted RBP22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 TBC1D25Q3MII6 688 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 ATP13A5Q4VNC0 1218 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 KHDC1Q4VXA5 237 aaKnown RBP22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 C3orf38Q5JPI3 329 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 TMPRSS9Q7Z410 1059 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 LRRC8AQ8IWT6 810 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 KLHDC8BQ8IXV7 354 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 TTC13Q8NBP0 860 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 CCDC112Q8NEF3 446 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 SNIP1Q8TAD8 396 aaKnown RBP22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 SLC35B2Q8TB61 432 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 FERMT1Q9BQL6 677 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 IL26Q9NPH9 171 aa22.08■■□□□ 1.13
GTF2F1-204ENST00000594965 CELSR3Q9NYQ7 3312 aa22.08■■□□□ 1.12
GTF2F1-204ENST00000594965 ZFHX4Q86UP3 3567 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 LAMA5O15230 3695 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 A0A087WV48 116 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 GOLGA6L9A6NEM1 432 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 C5orf60A6NFR6 353 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 CHUKO15111 745 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 BUD23O43709 281 aaKnown RBP22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 MTX2O75431 263 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 CA5AP35218 305 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 EIF2S3P41091 472 aaKnown RBP22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 TNNT3P45378 269 aaPredicted RBP22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 CCZ1BP86790 482 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 CCZ1P86791 482 aaPredicted RBP22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 PEX6Q13608 980 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 PTPRCAPQ14761 206 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 C19orf48Q6RUI8 117 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 GLT6D1Q7Z4J2 308 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 DTX3LQ8TDB6 740 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 FGF11Q92914 225 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 VPS35Q96QK1 796 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 APOL2Q9BQE5 337 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 FOXP3Q9BZS1 431 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 ASCL3Q9NQ33 180 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 KCNK6Q9Y257 313 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 AAR2Q9Y312 384 aaKnown RBP22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 PKD1L2Q7Z442 2459 aa22.07■■□□□ 1.12
GTF2F1-204ENST00000594965 ANKRD11Q6UB99 2663 aaPredicted RBP22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 GAPDHSO14556 408 aaPredicted RBP22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 STK10O94804 968 aaKnown RBP22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 ACP5P13686 325 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 ACTN2P35609 894 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 SPAM1P38567 509 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 GDF10P55107 478 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 OR1D5P58170 312 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 CHRNA6Q15825 494 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 IGF2-ASQ6U949 168 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 ZNF662Q6ZS27 426 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 FAM71DQ8N9W8 422 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 HNRNPLLQ8WVV9 542 aaKnown RBP22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 LIN37Q96GY3 246 aaPredicted RBP22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 DCBLD2Q96PD2 775 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 TBC1D29Q9UFV1 150 aa22.06■■□□□ 1.12
GTF2F1-204ENST00000594965 TRBV23OR9-2A0A075B6M9 112 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 A6NCN8 305 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 RHPN2P1A8MT19 583 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 GPR89AB7ZAQ6 455 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 GPR39O43194 453 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 PTMAP06454 111 aaKnown RBP22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 GPR89BP0CG08 455 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 CCKBRP32239 447 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 INHBCP55103 352 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 ZFP36L1Q07352 338 aaKnown RBP22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 SPARCL1Q14515 664 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 PRPSAP1Q14558 356 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 MEI1Q5TIA1 1274 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 DENND5AQ6IQ26 1287 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 PHYKPLQ8IUZ5 450 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 ZNF547Q8IVP9 402 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 LSMEM2Q8N112 164 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 SFRP1Q8N474 314 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 WDR36Q8NI36 951 aaKnown RBP22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 SLC37A2Q8TED4 501 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 ZNF578Q96N58 590 aaPredicted RBP22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 SLC23A2Q9UGH3 650 aa22.05■■□□□ 1.12
GTF2F1-204ENST00000594965 RALYQ9UKM9 306 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms